Genomic map of Mycobacterium phage Bernal13 (NC_024135)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024135
Definition
Mycobacterium phage Bernal13, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bernalvirus.
DB of origin
REFSEQ
Length
42392
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
66.19
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009031178.1 NC_024135_p51 hypothetical protein phrog_1467 unknown function unknown function 1 37022 37711
YP_009031151.1 NC_024135_p24 minor tail protein phrog_4137 unknown function unknown function 1 21727 22017
YP_009031186.1 NC_024135_p59 DNA methylase phrog_67 DNA methyltransferase other 1 41221 41958
YP_009031183.1 NC_024135_p56 hypothetical protein phrog_21728 unknown function unknown function 1 40418 40645
YP_009031175.1 NC_024135_p48 hypothetical protein phrog_3599 unknown function unknown function 1 35954 36469
YP_009031182.1 NC_024135_p55 hypothetical protein phrog_5436 unknown function unknown function -1 39471 40310
YP_009031129.1 NC_024135_p2 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 332 724
YP_009031136.1 NC_024135_p9 hypothetical protein phrog_20826 head-tail connector protein connector 1 7952 8284
YP_009031180.1 NC_024135_p53 hypothetical protein singleton unknown function unknown function 1 37939 38349
YP_009031166.1 NC_024135_p39 hypothetical protein phrog_549 unknown function unknown function 1 31063 31446
YP_009031160.1 NC_024135_p33 integrase phrog_1 integrase integration and excision 1 27804 29102
YP_009031173.1 NC_024135_p46 hypothetical protein phrog_19644 DNA binding protein DNA, RNA and nucleotide metabolism 1 34924 35070
YP_009031176.1 NC_024135_p49 hypothetical protein phrog_20101 unknown function unknown function 1 36466 36771
YP_009031152.1 NC_024135_p25 minor tail protein phrog_19249 minor tail protein tail 1 22024 23214
YP_009031135.1 NC_024135_p8 major capsid protein phrog_1328 major head protein head and packaging 1 6938 7921
YP_009031179.1 NC_024135_p52 hypothetical protein phrog_17722 unknown function unknown function 1 37720 37911
YP_009031155.1 NC_024135_p28 holin phrog_526 holin lysis 1 25159 25599
YP_009031162.1 NC_024135_p35 Cro (HTH DNA binding) phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30000 30314
YP_009031184.1 NC_024135_p57 hypothetical protein phrog_22083 unknown function unknown function 1 40761 40898
YP_009031132.1 NC_024135_p5 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4170 5918
YP_009031146.1 NC_024135_p19 minor tail protein phrog_110 minor tail protein tail 1 16980 18686
YP_009031133.1 NC_024135_p6 hypothetical protein phrog_1757 unknown function unknown function 1 5915 6094
YP_009031167.1 NC_024135_p40 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 31446 31703
YP_009031158.1 NC_024135_p31 hypothetical protein phrog_2342 unknown function unknown function -1 26455 27168
YP_009031130.1 NC_024135_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 724 2607
YP_009031153.1 NC_024135_p26 hypothetical protein phrog_240 head protein head and packaging 1 23250 23579
YP_009031185.1 NC_024135_p58 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40895 41194
YP_009031181.1 NC_024135_p54 hypothetical protein phrog_18332 unknown function unknown function -1 38476 39438
YP_009031164.1 NC_024135_p37 hypothetical protein phrog_19582 unknown function unknown function 1 30514 30717
YP_009031154.1 NC_024135_p27 lysin A phrog_317 endolysin lysis 1 23579 25162
YP_009031159.1 NC_024135_p32 hypothetical protein phrog_19123 membrane protein moron, auxiliary metabolic gene and host takeover -1 27161 27379
YP_009031157.1 NC_024135_p30 hypothetical protein phrog_404 minor tail protein tail 1 26046 26396
YP_009031165.1 NC_024135_p38 hypothetical protein phrog_12989 membrane protein moron, auxiliary metabolic gene and host takeover 1 30714 31007
YP_009031150.1 NC_024135_p23 minor tail protein phrog_2235 minor tail protein tail 1 21377 21715
YP_009031147.1 NC_024135_p20 minor tail protein phrog_3856 minor tail protein tail 1 18683 19657
YP_009031187.1 NC_024135_p60 hypothetical protein phrog_35844 unknown function unknown function 1 42108 42311
YP_009031144.1 NC_024135_p17 tapemeasure phrog_3547 tail length tape measure protein tail 1 11932 16017
YP_009031138.1 NC_024135_p11 hypothetical protein phrog_19486 head-tail connector protein connector 1 8695 9006
YP_009031148.1 NC_024135_p21 minor tail protein phrog_19553 minor tail protein tail 1 19657 20109
YP_009031156.1 NC_024135_p29 hypothetical protein phrog_17951 unknown function unknown function 1 25680 25976
YP_009031169.1 NC_024135_p42 hypothetical protein phrog_19059 membrane protein moron, auxiliary metabolic gene and host takeover 1 32076 32600
YP_009031168.1 NC_024135_p41 hypothetical protein phrog_9420 unknown function unknown function 1 31700 32074
YP_009031143.1 NC_024135_p16 tail assembly chaperone phrog_19026 tail assembly chaperone tail 1 10873 11475
YP_009031163.1 NC_024135_p36 Xis phrog_66 excisionase and transcriptional regulator integration and excision 1 30311 30517
YP_009031161.1 NC_024135_p34 immunity repressor phrog_5301 transcriptional repressor transcription regulation -1 29442 29765
YP_009031172.1 NC_024135_p45 hypothetical protein phrog_7969 unknown function unknown function 1 34733 34924
YP_009031134.1 NC_024135_p7 scaffolding protein phrog_15003 head scaffolding protein head and packaging 1 6163 6921
YP_009031137.1 NC_024135_p10 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8271 8714
YP_009031128.1 NC_024135_p1 hypothetical protein phrog_1454 unknown function unknown function 1 89 325
YP_009031131.1 NC_024135_p4 portal protein phrog_104 portal protein head and packaging 1 2624 4189
YP_009031174.1 NC_024135_p47 hypothetical protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 35076 35957
YP_009031171.1 NC_024135_p44 hypothetical protein phrog_3657 unknown function unknown function 1 33424 34716
YP_009031141.1 NC_024135_p14 major tail subunit phrog_476 major tail protein tail 1 9882 10814
YP_009031139.1 NC_024135_p12 hypothetical protein phrog_5210 neck protein connector 1 9006 9371
YP_009031177.1 NC_024135_p50 hypothetical protein phrog_21821 unknown function unknown function 1 36768 37025
YP_009031149.1 NC_024135_p22 minor tail protein phrog_2683 minor tail protein tail 1 20109 21380
YP_009031140.1 NC_024135_p13 hypothetical protein phrog_123 tail terminator connector 1 9373 9864
YP_009031170.1 NC_024135_p43 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 32597 33427
YP_009031145.1 NC_024135_p18 minor tail protein phrog_106 minor tail protein tail 1 16018 16983
YP_009031142.1 NC_024135_p15 tail assembly chaperone phrog_21634 tail assembly chaperone tail 1 10873 11927