| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024136 |
Definition |
Mycobacterium phage Seabiscuit, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
51781 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.65 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009031223.1 | NC_024136_p36 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28061 | 28864 |
| YP_009031228.1 | NC_024136_p41 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31492 | 31587 |
| YP_009031247.1 | NC_024136_p60 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 39676 | 39750 |
| YP_009031197.1 | NC_024136_p10 | LysB | phrog_102 | endolysin | lysis | 1 | 5728 | 6696 |
| YP_009031213.1 | NC_024136_p26 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18891 | 20948 |
| YP_009031194.1 | NC_024136_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3780 | 4040 |
| YP_009031234.1 | NC_024136_p47 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34647 | 34877 |
| YP_009031235.1 | NC_024136_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34908 | 35399 |
| YP_009031272.1 | NC_024136_p85 | hypothetical protein | phrog_14636 | unknown function | unknown function | -1 | 47840 | 48010 |
| YP_009031277.1 | NC_024136_p90 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 49973 | 50326 |
| YP_009031205.1 | NC_024136_p18 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12965 | 13414 |
| YP_009031218.1 | NC_024136_p31 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23754 | 24101 |
| YP_009031259.1 | NC_024136_p72 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 43901 | 44218 |
| YP_009031273.1 | NC_024136_p86 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 48312 | 48983 |
| YP_009031207.1 | NC_024136_p20 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13776 | 14171 |
| YP_009031232.1 | NC_024136_p45 | DNA polymerase 1 | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32547 | 34373 |
| YP_009031260.1 | NC_024136_p73 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 44215 | 44622 |
| YP_009031208.1 | NC_024136_p21 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14175 | 14621 |
| YP_009031233.1 | NC_024136_p46 | hypothetical protein | phrog_6173 | unknown function | unknown function | -1 | 34396 | 34650 |
| YP_009031204.1 | NC_024136_p17 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12729 | 12965 |
| YP_009031255.1 | NC_024136_p68 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42274 | 42456 |
| YP_009031214.1 | NC_024136_p27 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 20945 | 21127 |
| YP_009031222.1 | NC_024136_p35 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27873 | 28064 |
| YP_009031278.1 | NC_024136_p91 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 50323 | 50421 |
| YP_009031188.1 | NC_024136_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 600 | 752 |
| YP_009031271.1 | NC_024136_p84 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 47687 | 47839 |
| YP_009031196.1 | NC_024136_p9 | LysA | phrog_317 | endolysin | lysis | 1 | 4305 | 5738 |
| YP_009031258.1 | NC_024136_p71 | hypothetical protein | phrog_17362 | unknown function | unknown function | -1 | 43677 | 43904 |
| YP_009031189.1 | NC_024136_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 749 | 1045 |
| YP_009031281.1 | NC_024136_p94 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 51184 | 51387 |
| YP_009031250.1 | NC_024136_p63 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 40341 | 40427 |
| YP_009031230.1 | NC_024136_p43 | hypothetical protein | phrog_9812 | unknown function | unknown function | -1 | 31883 | 32134 |
| YP_009031261.1 | NC_024136_p74 | repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44655 | 45167 |
| YP_009031246.1 | NC_024136_p59 | hypothetical protein | phrog_11567 | unknown function | unknown function | -1 | 39477 | 39653 |
| YP_009031263.1 | NC_024136_p76 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46020 | 46319 |
| YP_009031270.1 | NC_024136_p83 | DnaJ-like protein | phrog_15035 | unknown function | unknown function | -1 | 47468 | 47662 |
| YP_009031238.1 | NC_024136_p51 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35942 | 36733 |
| YP_009031201.1 | NC_024136_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10178 | 11059 |
| YP_009031265.1 | NC_024136_p78 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 46582 | 46785 |
| YP_009031251.1 | NC_024136_p64 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40424 | 40723 |
| YP_009031243.1 | NC_024136_p56 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38455 | 38976 |
| YP_009031221.1 | NC_024136_p34 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27537 | 27863 |
| YP_009031269.1 | NC_024136_p82 | hypothetical protein | phrog_9026 | unknown function | unknown function | -1 | 47259 | 47471 |
| YP_009031276.1 | NC_024136_p89 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49776 | 49976 |
| YP_009031252.1 | NC_024136_p65 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40720 | 41529 |
| YP_009031206.1 | NC_024136_p19 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13414 | 13776 |
| YP_009031240.1 | NC_024136_p53 | RDF protein | phrog_221 | metallo-phosphoesterase | other | -1 | 36871 | 37638 |
| YP_009031245.1 | NC_024136_p58 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39316 | 39495 |
| YP_009031224.1 | NC_024136_p37 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28985 | 29281 |
| YP_009031216.1 | NC_024136_p29 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 22967 | 23413 |
| YP_009031203.1 | NC_024136_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11640 | 12650 |
| YP_009031249.1 | NC_024136_p62 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39878 | 40354 |
| YP_009031275.1 | NC_024136_p88 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 49324 | 49608 |
| YP_009031190.1 | NC_024136_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1080 | 1514 |
| YP_009031212.1 | NC_024136_p25 | tapemeasure | phrog_305 | tail length tape measure protein | tail | 1 | 16399 | 18867 |
| YP_009031202.1 | NC_024136_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11118 | 11630 |
| YP_009031266.1 | NC_024136_p79 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 46782 | 46970 |
| YP_009031229.1 | NC_024136_p42 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31584 | 31886 |
| YP_009031192.1 | NC_024136_p5 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2000 | 3070 |
| YP_009031209.1 | NC_024136_p22 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14630 | 15478 |
| YP_009031191.1 | NC_024136_p4 | hypothetical protein | phrog_7087 | unknown function | unknown function | 1 | 1534 | 1902 |
| YP_009031210.1 | NC_024136_p23 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15587 | 16386 |
| YP_009031242.1 | NC_024136_p55 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 37811 | 38458 |
| YP_009031231.1 | NC_024136_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32170 | 32550 |
| YP_009031220.1 | NC_024136_p33 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25972 | 27450 |
| YP_009031280.1 | NC_024136_p93 | hypothetical protein | phrog_12306 | unknown function | unknown function | -1 | 50845 | 51042 |
| YP_009031268.1 | NC_024136_p81 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 47134 | 47262 |
| YP_009031256.1 | NC_024136_p69 | RecB | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42483 | 43283 |
| YP_009031254.1 | NC_024136_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 41950 | 42270 |
| YP_009031253.1 | NC_024136_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41516 | 41953 |
| YP_009031217.1 | NC_024136_p30 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23410 | 23757 |
| YP_009031239.1 | NC_024136_p52 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36726 | 36866 |
| YP_009031226.1 | NC_024136_p39 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31056 | 31328 |
| YP_009031200.1 | NC_024136_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8739 | 10181 |
| YP_009031264.1 | NC_024136_p77 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 46316 | 46585 |
| YP_009031244.1 | NC_024136_p57 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38822 | 39337 |
| YP_009031257.1 | NC_024136_p70 | hypothetical protein | phrog_8167 | unknown function | unknown function | -1 | 43283 | 43591 |
| YP_009031236.1 | NC_024136_p49 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35434 | 35739 |
| YP_009031215.1 | NC_024136_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21127 | 22929 |
| YP_009031225.1 | NC_024136_p38 | integrase | phrog_95 | integrase | integration and excision | 1 | 29433 | 30935 |
| YP_009031193.1 | NC_024136_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3080 | 3769 |
| YP_009031199.1 | NC_024136_p12 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7054 | 8742 |
| YP_009031241.1 | NC_024136_p54 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37635 | 37814 |
| YP_009031274.1 | NC_024136_p87 | hypothetical protein | phrog_4958 | unknown function | unknown function | -1 | 48988 | 49272 |
| YP_009031195.1 | NC_024136_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4048 | 4305 |
| YP_009031237.1 | NC_024136_p50 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35739 | 35945 |
| YP_009031279.1 | NC_024136_p92 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 50499 | 50753 |
| YP_009031267.1 | NC_024136_p80 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46970 | 47137 |
| YP_009031211.1 | NC_024136_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15587 | 15964 |
| YP_009031219.1 | NC_024136_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24126 | 25979 |
| YP_009031227.1 | NC_024136_p40 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31325 | 31495 |
| YP_009031262.1 | NC_024136_p75 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 45430 | 46023 |
| YP_009031198.1 | NC_024136_p11 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 6693 | 7034 |
| YP_009031248.1 | NC_024136_p61 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39747 | 39881 |