Genomic map of Escherichia phage vB_EcoS_FFH1 (NC_024139)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024139
Definition
Escherichia phage vB_EcoS_FFH1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
DB of origin
REFSEQ
Length
108483
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
156
%GC
39.24
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009031760.1 NC_024139_p139 hypothetical protein phrog_3914 tail assembly chaperone tail -1 94165 94533
YP_009031652.1 NC_024139_p31 hypothetical protein phrog_4979 unknown function unknown function -1 15882 16313
YP_009031726.1 NC_024139_p105 hypothetical protein phrog_1818 unknown function unknown function 1 56725 57231
YP_009031667.1 NC_024139_p46 hypothetical protein phrog_4243 unknown function unknown function -1 23575 24273
YP_009031688.1 NC_024139_p67 hypothetical protein phrog_5473 unknown function unknown function -1 33061 33246
YP_009031703.1 NC_024139_p82 hypothetical protein phrog_1479 unknown function unknown function -1 41297 41614
YP_009031633.1 NC_024139_p12 hypothetical protein phrog_5607 unknown function unknown function 1 7788 7937
YP_009031713.1 NC_024139_p92 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 46097 46936
YP_009031649.1 NC_024139_p28 hypothetical protein phrog_4804 unknown function unknown function -1 14865 15110
YP_009031653.1 NC_024139_p32 hypothetical protein phrog_21849 unknown function unknown function -1 16366 16488
YP_009031720.1 NC_024139_p99 anaerobic ribonucleoside triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 53024 54898
YP_009031714.1 NC_024139_p93 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 46936 47469
YP_009031632.1 NC_024139_p11 hypothetical protein phrog_5145 unknown function unknown function 1 7511 7741
YP_009031722.1 NC_024139_p101 hypothetical protein phrog_5236 unknown function unknown function 1 55372 55578
YP_009031693.1 NC_024139_p72 hypothetical protein phrog_7716 unknown function unknown function -1 35055 35222
YP_009031734.1 NC_024139_p113 hypothetical protein phrog_3696 unknown function unknown function 1 63251 63547
YP_009031673.1 NC_024139_p52 hypothetical protein phrog_2855 unknown function unknown function -1 26118 26399
YP_009031641.1 NC_024139_p20 hypothetical protein phrog_6021 unknown function unknown function -1 12261 12494
YP_009031639.1 NC_024139_p18 hypothetical protein phrog_5271 unknown function unknown function -1 11456 12076
YP_009031768.1 NC_024139_p147 prohead protease phrog_80 head maturation protease head and packaging -1 100554 101186
YP_009031675.1 NC_024139_p54 hypothetical protein phrog_4499 unknown function unknown function -1 26945 27259
YP_009031762.1 NC_024139_p141 minor tail protein phrog_3889 base plate tail tube protein tail -1 94992 95894
YP_009031716.1 NC_024139_p95 H-N-H endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 48678 49160
YP_009031663.1 NC_024139_p42 holin phrog_860 holin lysis -1 20711 21367
YP_009031704.1 NC_024139_p83 hypothetical protein phrog_1491 tail fiber protein tail -1 42057 42695
YP_009031744.1 NC_024139_p123 hypothetical protein phrog_4258 unknown function unknown function 1 73838 74122
YP_009031758.1 NC_024139_p137 hypothetical protein phrog_1302 distal tail protein tail -1 89677 90291
YP_009031755.1 NC_024139_p134 tail protein phrog_1084 unknown function unknown function -1 84345 84767
YP_009031754.1 NC_024139_p133 tail fiber protein phrog_1419 tail protein tail -1 81895 84345
YP_009031775.1 NC_024139_p154 lytic conversion lipoprotein precursor phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 107261 107494
YP_009031645.1 NC_024139_p24 hypothetical protein phrog_4905 unknown function unknown function -1 13472 13810
YP_009031623.1 NC_024139_p2 hypothetical protein phrog_4576 unknown function unknown function -1 816 1211
YP_009031678.1 NC_024139_p57 hypothetical protein phrog_4760 unknown function unknown function -1 28248 28538
YP_009031706.1 NC_024139_p85 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 43002 43703
YP_009031769.1 NC_024139_p148 tail protein phrog_2973 Hoc-like head decoration head and packaging -1 101190 101684
YP_009031721.1 NC_024139_p100 hypothetical protein phrog_11748 unknown function unknown function 1 54999 55379
YP_009031625.1 NC_024139_p4 phage DNA transfer protein phrog_1745 DNA transfer protein other -1 1565 3229
YP_009031739.1 NC_024139_p118 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 66796 68262
YP_009031666.1 NC_024139_p45 hypothetical protein phrog_739 Rz-like spanin lysis -1 23169 23618
YP_009031723.1 NC_024139_p102 hypothetical protein phrog_5827 unknown function unknown function 1 55547 55741
YP_009031731.1 NC_024139_p110 D2 protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 61752 62456
YP_009031774.1 NC_024139_p153 receptor-binding tail protein phrog_4815 receptor binding tail protein tail -1 105259 107181
YP_009031640.1 NC_024139_p19 hypothetical protein phrog_5799 unknown function unknown function -1 12076 12261
YP_009031638.1 NC_024139_p17 hypothetical protein phrog_8993 unknown function unknown function -1 10725 11456
YP_009031745.1 NC_024139_p124 D11 protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 74115 74888
YP_009031677.1 NC_024139_p56 hypothetical protein phrog_3909 unknown function unknown function -1 27752 27946
YP_009031710.1 NC_024139_p89 hypothetical protein phrog_4593 unknown function unknown function -1 44889 45167
YP_009031684.1 NC_024139_p63 hypothetical protein phrog_6053 unknown function unknown function -1 31179 31496
YP_009031697.1 NC_024139_p76 hypothetical protein phrog_7894 unknown function unknown function 1 37514 37930
YP_009031682.1 NC_024139_p61 hypothetical protein phrog_7572 unknown function unknown function -1 30593 30946
YP_009031764.1 NC_024139_p143 hypothetical protein phrog_3907 tail terminator connector -1 97332 97817
YP_009031671.1 NC_024139_p50 hypothetical protein phrog_5486 unknown function unknown function -1 25438 25833
YP_009031644.1 NC_024139_p23 hypothetical protein phrog_6933 unknown function unknown function -1 13213 13416
YP_009031630.1 NC_024139_p9 H-N-H endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 5299 5817
YP_009031694.1 NC_024139_p73 hypothetical protein phrog_10617 unknown function unknown function -1 35322 35510
YP_009031635.1 NC_024139_p14 hypothetical protein phrog_4379 unknown function unknown function 1 8154 8498
YP_009031715.1 NC_024139_p94 aerobic ribonucleoside diphosphate reductase, small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 47466 48611
YP_009031690.1 NC_024139_p69 hypothetical protein phrog_5876 unknown function unknown function -1 33729 34001
YP_009031741.1 NC_024139_p120 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 69212 71779
YP_009031712.1 NC_024139_p91 hypothetical protein phrog_5321 unknown function unknown function -1 45720 46001
YP_009031681.1 NC_024139_p60 hypothetical protein phrog_2210 unknown function unknown function -1 29314 29520
YP_009031761.1 NC_024139_p140 hypothetical protein phrog_313 Tail assembly chaperone tail -1 94595 94999
YP_009031686.1 NC_024139_p65 hypothetical protein phrog_6073 Rz-like spanin lysis -1 31951 32148
YP_009031748.1 NC_024139_p127 D14 protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 77725 78207
YP_009031626.1 NC_024139_p5 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 3320 3517
YP_009031631.1 NC_024139_p10 hypothetical protein phrog_4263 unknown function unknown function 1 6383 7393
YP_009031628.1 NC_024139_p7 hypothetical protein phrog_3747 unknown function unknown function -1 4117 4368
YP_009031746.1 NC_024139_p125 recombination endonuclease subunit D12 phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 74925 75902
YP_009031711.1 NC_024139_p90 RNaseH phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 45244 45720
YP_009031759.1 NC_024139_p138 pore forming tail tip protein Pb2 phrog_3779 tail length tape measure protein tail -1 90401 94081
YP_009031629.1 NC_024139_p8 hypothetical protein phrog_4718 unknown function unknown function -1 4597 4800
YP_009031766.1 NC_024139_p145 hypothetical protein phrog_442 head-tail adaptor connector -1 98588 99100
YP_009031763.1 NC_024139_p142 major tail protein phrog_3575 major tail protein tail -1 95899 97305
YP_009031662.1 NC_024139_p41 lysozyme phrog_465 endolysin lysis -1 20301 20714
YP_009031777.1 NC_024139_p156 hypothetical protein phrog_5851 unknown function unknown function 1 107890 108081
YP_009031643.1 NC_024139_p22 hypothetical protein phrog_4605 unknown function unknown function -1 12765 13211
YP_009031658.1 NC_024139_p37 hypothetical protein phrog_6798 unknown function unknown function -1 18476 18910
YP_009031679.1 NC_024139_p58 hypothetical protein phrog_5919 unknown function unknown function -1 28698 28862
YP_009031736.1 NC_024139_p115 NAD-dependent DNA ligase, subunit A phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 63994 64965
YP_009031672.1 NC_024139_p51 hypothetical protein phrog_4821 unknown function unknown function -1 25826 26125
YP_009031707.1 NC_024139_p86 hypothetical protein phrog_4586 unknown function unknown function -1 43732 43968
YP_009031656.1 NC_024139_p35 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 17360 18223
YP_009031771.1 NC_024139_p150 hypothetical protein phrog_3497 unknown function unknown function -1 102898 103335
YP_009031753.1 NC_024139_p132 hypothetical protein phrog_1361 unknown function unknown function -1 81628 81894
YP_009031770.1 NC_024139_p149 portal protein phrog_12 portal protein head and packaging -1 101681 102898
YP_009031647.1 NC_024139_p26 hypothetical protein phrog_5967 unknown function unknown function -1 14249 14449
YP_009031702.1 NC_024139_p81 spore cortex lytic enzyme precursor phrog_938 endolysin lysis -1 40842 41291
YP_009031747.1 NC_024139_p126 recombination endonuclease subunit D13 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 75883 77721
YP_009031692.1 NC_024139_p71 hypothetical protein phrog_5153 unknown function unknown function -1 34856 35062
YP_009031725.1 NC_024139_p104 hypothetical protein phrog_5116 unknown function unknown function 1 56556 56738
YP_009031655.1 NC_024139_p34 hypothetical protein phrog_14979 unknown function unknown function -1 17061 17360
YP_009031701.1 NC_024139_p80 hypothetical protein phrog_5077 unknown function unknown function -1 40603 40773
YP_009031765.1 NC_024139_p144 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 97821 98588
YP_009031772.1 NC_024139_p151 terminase large subunit phrog_2 terminase large subunit head and packaging -1 103450 104766
YP_009031669.1 NC_024139_p48 hypothetical protein phrog_5265 unknown function unknown function -1 24883 25167
YP_009031624.1 NC_024139_p3 hypothetical protein phrog_8297 unknown function unknown function -1 1250 1507
YP_009031757.1 NC_024139_p136 tail protein Pb3 phrog_31 central tail fiber J tail -1 86831 89680
YP_009031687.1 NC_024139_p66 hypothetical protein phrog_3972 unknown function unknown function -1 32602 32949
YP_009031636.1 NC_024139_p15 hypothetical protein phrog_6973 unknown function unknown function 1 8495 8698
YP_009031654.1 NC_024139_p33 serine/threonine protein phosphatase phrog_547 phosphoesterase other -1 16481 17071
YP_009031738.1 NC_024139_p117 transcription factor phrog_323 transcriptional regulator, D5-like transcription regulation 1 65940 66707
YP_009031740.1 NC_024139_p119 DNA replication primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 68259 69149
YP_009031627.1 NC_024139_p6 DNA-binding protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3608 4015
YP_009031634.1 NC_024139_p13 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 7940 8152
YP_009031756.1 NC_024139_p135 tail protein Pb4 phrog_3890 straight fibre tail protein tail -1 84774 86831
YP_009031709.1 NC_024139_p88 hypothetical protein phrog_4516 unknown function unknown function -1 44290 44805
YP_009031749.1 NC_024139_p128 flap endonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 78207 79082
YP_009031674.1 NC_024139_p53 hypothetical protein phrog_5021 unknown function unknown function -1 26476 26823
YP_009031773.1 NC_024139_p152 hypothetical protein phrog_3802 terminase small subunit head and packaging -1 104766 105248
YP_009031717.1 NC_024139_p96 aerobic ribonucleoside diphosphate reductase, large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 49218 51551
YP_009031665.1 NC_024139_p44 deoxynucleoside-5-monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 22133 22885
YP_009031642.1 NC_024139_p21 hypothetical protein phrog_9887 unknown function unknown function -1 12482 12772
YP_009031767.1 NC_024139_p146 major head protein precursor phrog_10 major head protein head and packaging -1 99160 100536
YP_009031660.1 NC_024139_p39 hypothetical protein phrog_4328 unknown function unknown function -1 19297 19728
YP_009031750.1 NC_024139_p129 deoxyUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 79079 79525
YP_009031657.1 NC_024139_p36 hypothetical protein phrog_7354 major head protein head and packaging -1 18226 18471
YP_009031729.1 NC_024139_p108 replication origin binding protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 58677 61466
YP_009031733.1 NC_024139_p112 D3 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 62804 63214
YP_009031743.1 NC_024139_p122 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 72266 73618
YP_009031659.1 NC_024139_p38 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 19014 19304
YP_009031661.1 NC_024139_p40 hypothetical protein phrog_5944 unknown function unknown function -1 19807 20223
YP_009031751.1 NC_024139_p130 hypothetical protein phrog_5592 unknown function unknown function 1 79503 79751
YP_009031708.1 NC_024139_p87 hypothetical protein phrog_2380 unknown function unknown function -1 44010 44225
YP_009031705.1 NC_024139_p84 hypothetical protein phrog_5252 unknown function unknown function -1 42749 42931
YP_009031646.1 NC_024139_p25 hypothetical protein phrog_4215 unknown function unknown function -1 13791 14252
YP_009031700.1 NC_024139_p79 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 40160 40603
YP_009031735.1 NC_024139_p114 hypothetical protein phrog_4053 transcriptional regulator transcription regulation 1 63598 63906
YP_009031668.1 NC_024139_p47 hypothetical protein phrog_5468 unknown function unknown function -1 24428 24772
YP_009031718.1 NC_024139_p97 hypothetical protein phrog_5357 tail length tape measure protein tail -1 51693 51914
YP_009031650.1 NC_024139_p29 hypothetical protein phrog_4984 unknown function unknown function -1 15107 15352
YP_009031689.1 NC_024139_p68 hypothetical protein phrog_22204 unknown function unknown function 1 33267 33398
YP_009031776.1 NC_024139_p155 hypothetical protein phrog_8596 unknown function unknown function 1 107658 107786
YP_009031696.1 NC_024139_p75 hypothetical protein phrog_8119 unknown function unknown function 1 36509 37492
YP_009031651.1 NC_024139_p30 hypothetical protein phrog_3880 unknown function unknown function -1 15552 15803
YP_009031724.1 NC_024139_p103 Sir2-like protein phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 55741 56565
YP_009031699.1 NC_024139_p78 hypothetical protein phrog_19105 unknown function unknown function -1 39709 39846
YP_009031742.1 NC_024139_p121 hypothetical protein phrog_4386 unknown function unknown function 1 71772 72269
YP_009031737.1 NC_024139_p116 NAD-dependent DNA ligase, subunit B phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 65168 65947
YP_009031622.1 NC_024139_p1 deoxynucleoside-5-monophosphase phrog_415 polynucleotide kinase other -1 1 735
YP_009031680.1 NC_024139_p59 hypothetical protein phrog_5598 unknown function unknown function -1 28855 29076
YP_009031676.1 NC_024139_p55 acetyltransferase-like protein phrog_1209 unknown function unknown function -1 27341 27709
YP_009031670.1 NC_024139_p49 hypothetical protein phrog_5792 unknown function unknown function -1 25164 25460
YP_009031691.1 NC_024139_p70 hypothetical protein phrog_4551 unknown function unknown function -1 34490 34765
YP_009031730.1 NC_024139_p109 hypothetical protein phrog_5291 unknown function unknown function 1 61450 61683
YP_009031695.1 NC_024139_p74 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 35724 36242
YP_009031683.1 NC_024139_p62 hypothetical protein phrog_13931 unknown function unknown function -1 31036 31179
YP_009031727.1 NC_024139_p106 hypothetical protein phrog_2502 unknown function unknown function 1 57234 57662
YP_009031637.1 NC_024139_p16 hypothetical protein phrog_18411 homing endonuclease DNA, RNA and nucleotide metabolism -1 10382 10738
YP_009031719.1 NC_024139_p98 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 51916 52668
YP_009031698.1 NC_024139_p77 hypothetical protein phrog_200 lipoprotein other -1 38255 39202
YP_009031752.1 NC_024139_p131 tail fiber protein phrog_6921 tail fiber protein tail -1 79875 81617
YP_009031664.1 NC_024139_p43 ATP-dependent Clp protease phrog_1827 ATP-dependent protease other -1 21524 22120
YP_009031648.1 NC_024139_p27 hypothetical protein phrog_4731 unknown function unknown function -1 14549 14875
YP_009031728.1 NC_024139_p107 hypothetical protein phrog_2502 unknown function unknown function 1 57672 58064
YP_009031685.1 NC_024139_p64 hypothetical protein phrog_6221 unknown function unknown function -1 31594 31761
YP_009031732.1 NC_024139_p111 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 62449 62700