| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024140 |
Definition |
Pseudomonas phage vB_PaeP_C2-10_Ab09, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus. |
DB of origin |
REFSEQ |
Length |
72028 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
83 |
%GC |
54.89 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009031808.1 | NC_024140_p31 | hypothetical protein | phrog_14291 | unknown function | unknown function | 1 | 14686 | 15180 |
| YP_009031788.1 | NC_024140_p11 | hypothetical protein | phrog_8570 | unknown function | unknown function | 1 | 3288 | 3539 |
| YP_009031855.1 | NC_024140_p78 | N4 gp68-like protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67313 | 68965 |
| YP_009031853.1 | NC_024140_p76 | hypothetical protein | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 65827 | 66246 |
| YP_009031815.1 | NC_024140_p38 | N4 gp33-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 22220 | 24736 |
| YP_009031782.1 | NC_024140_p5 | hypothetical protein | phrog_7875 | unknown function | unknown function | 1 | 1542 | 1796 |
| YP_009031781.1 | NC_024140_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1304 | 1501 |
| YP_009031824.1 | NC_024140_p47 | hypothetical protein | phrog_2398 | unknown function | unknown function | -1 | 29154 | 29666 |
| YP_009031802.1 | NC_024140_p25 | hypothetical protein | phrog_8451 | unknown function | unknown function | 1 | 10693 | 11277 |
| YP_009031825.1 | NC_024140_p48 | hypothetical protein | phrog_7697 | tail fiber protein | tail | -1 | 29633 | 32935 |
| YP_009031828.1 | NC_024140_p51 | hypothetical protein | phrog_496 | tail fiber protein | tail | -1 | 33908 | 35221 |
| YP_009031791.1 | NC_024140_p14 | N4 gp14-like protein | phrog_2072 | unknown function | unknown function | 1 | 4398 | 4802 |
| YP_009031829.1 | NC_024140_p52 | hypothetical protein | phrog_3360 | unknown function | unknown function | 1 | 35590 | 36018 |
| YP_009031801.1 | NC_024140_p24 | hypothetical protein | phrog_8613 | unknown function | unknown function | 1 | 10142 | 10696 |
| YP_009031786.1 | NC_024140_p9 | hypothetical protein | phrog_8334 | unknown function | unknown function | 1 | 2788 | 3063 |
| YP_009031780.1 | NC_024140_p3 | hypothetical protein | phrog_3968 | unknown function | unknown function | 1 | 1059 | 1307 |
| YP_009031797.1 | NC_024140_p20 | hypothetical protein | phrog_14277 | unknown function | unknown function | 1 | 7132 | 7416 |
| YP_009031823.1 | NC_024140_p46 | hypothetical protein | phrog_2687 | unknown function | unknown function | -1 | 29084 | 29326 |
| YP_009031809.1 | NC_024140_p32 | N4 gp25-like protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15180 | 16406 |
| YP_009031790.1 | NC_024140_p13 | hypothetical protein | phrog_8775 | unknown function | unknown function | 1 | 4075 | 4401 |
| YP_009031789.1 | NC_024140_p12 | hypothetical protein | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 3633 | 3923 |
| YP_009031804.1 | NC_024140_p27 | hypothetical protein | phrog_8112 | unknown function | unknown function | 1 | 12263 | 12448 |
| YP_009031787.1 | NC_024140_p10 | hypothetical protein | phrog_8895 | unknown function | unknown function | 1 | 2979 | 3281 |
| YP_009031817.1 | NC_024140_p40 | hypothetical protein | phrog_7722 | unknown function | unknown function | 1 | 26575 | 26799 |
| YP_009031838.1 | NC_024140_p61 | hypothetical protein | phrog_7564 | unknown function | unknown function | 1 | 42515 | 42952 |
| YP_009031821.1 | NC_024140_p44 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | -1 | 28054 | 28608 |
| YP_009031858.1 | NC_024140_p81 | hypothetical protein | phrog_8800 | unknown function | unknown function | 1 | 70188 | 70400 |
| YP_009031807.1 | NC_024140_p30 | N4 gp24-like protein | phrog_1297 | ATPase | other | 1 | 13580 | 14650 |
| YP_009031832.1 | NC_024140_p55 | N4 gp43-like protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37419 | 39596 |
| YP_009031851.1 | NC_024140_p74 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 63204 | 63596 |
| YP_009031785.1 | NC_024140_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2528 | 2833 |
| YP_009031841.1 | NC_024140_p64 | hypothetical protein | phrog_7891 | unknown function | unknown function | 1 | 44053 | 44370 |
| YP_009031783.1 | NC_024140_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1909 | 2388 |
| YP_009031857.1 | NC_024140_p80 | hypothetical protein | phrog_9047 | unknown function | unknown function | 1 | 69757 | 70188 |
| YP_009031795.1 | NC_024140_p18 | N4 gp15-like protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5892 | 6824 |
| YP_009031850.1 | NC_024140_p73 | N4 gp57-like protein | phrog_2120 | tail length tape measure protein | tail | -1 | 62014 | 63204 |
| YP_009031843.1 | NC_024140_p66 | N4 gp50-like protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 44599 | 54795 |
| YP_009031813.1 | NC_024140_p36 | hypothetical protein | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 20886 | 21455 |
| YP_009031847.1 | NC_024140_p70 | N4 gp54-like protein | phrog_2050 | virion structural protein | head and packaging | -1 | 59089 | 60054 |
| YP_009031779.1 | NC_024140_p2 | hypothetical protein | phrog_7624 | unknown function | unknown function | 1 | 871 | 1062 |
| YP_009031810.1 | NC_024140_p33 | N4 gp37-like protein | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 16325 | 17662 |
| YP_009031860.1 | NC_024140_p83 | hypothetical protein | phrog_8657 | unknown function | unknown function | 1 | 71160 | 71810 |
| YP_009031834.1 | NC_024140_p57 | N4 gp45-like protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40358 | 41146 |
| YP_009031830.1 | NC_024140_p53 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 36015 | 36395 |
| YP_009031816.1 | NC_024140_p39 | N4 gp34-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 24733 | 26526 |
| YP_009031793.1 | NC_024140_p16 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 5053 | 5493 |
| YP_009031784.1 | NC_024140_p7 | hypothetical protein | phrog_8477 | unknown function | unknown function | 1 | 2392 | 2595 |
| YP_009031856.1 | NC_024140_p79 | N4 gp69-like protein | phrog_2109 | unknown function | unknown function | -1 | 68965 | 69762 |
| YP_009031798.1 | NC_024140_p21 | hypothetical protein | phrog_8144 | unknown function | unknown function | 1 | 7420 | 7692 |
| YP_009031805.1 | NC_024140_p28 | hypothetical protein | phrog_5534 | unknown function | unknown function | 1 | 12521 | 13309 |
| YP_009031844.1 | NC_024140_p67 | hypothetical protein | phrog_6467 | unknown function | unknown function | -1 | 54796 | 56361 |
| YP_009031794.1 | NC_024140_p17 | hypothetical protein | phrog_8585 | unknown function | unknown function | 1 | 5527 | 5880 |
| YP_009031848.1 | NC_024140_p71 | N4 gp55-like protein | phrog_2130 | unknown function | unknown function | -1 | 60058 | 60723 |
| YP_009031859.1 | NC_024140_p82 | hypothetical protein | phrog_9146 | unknown function | unknown function | 1 | 70381 | 70956 |
| YP_009031833.1 | NC_024140_p56 | N4 gp44-like protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39627 | 40373 |
| YP_009031800.1 | NC_024140_p23 | hypothetical protein | phrog_7111 | unknown function | unknown function | 1 | 9519 | 10145 |
| YP_009031822.1 | NC_024140_p45 | hypothetical protein | phrog_3108 | unknown function | unknown function | -1 | 28563 | 29087 |
| YP_009031803.1 | NC_024140_p26 | hypothetical protein | phrog_8374 | unknown function | unknown function | 1 | 11175 | 11798 |
| YP_009031831.1 | NC_024140_p54 | N4 gp42-like protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36367 | 37407 |
| YP_009031812.1 | NC_024140_p35 | N4 gp39-like protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18147 | 20804 |
| YP_009031811.1 | NC_024140_p34 | hypothetical protein | phrog_7095 | unknown function | unknown function | 1 | 17662 | 18189 |
| YP_009031799.1 | NC_024140_p22 | N4 gp16-like protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7727 | 8968 |
| YP_009031845.1 | NC_024140_p68 | N4 gp52-like protein | phrog_2646 | unknown function | unknown function | -1 | 56361 | 56828 |
| YP_009031792.1 | NC_024140_p15 | hypothetical protein | phrog_7756 | unknown function | unknown function | 1 | 4736 | 5053 |
| YP_009031840.1 | NC_024140_p63 | hypothetical protein | phrog_8394 | unknown function | unknown function | 1 | 43694 | 44056 |
| YP_009031796.1 | NC_024140_p19 | hypothetical protein | phrog_8597 | unknown function | unknown function | 1 | 6897 | 7097 |
| YP_009031854.1 | NC_024140_p77 | N4 gp67-like protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66582 | 67373 |
| YP_009031814.1 | NC_024140_p37 | hypothetical protein | phrog_8620 | unknown function | unknown function | 1 | 21630 | 22028 |
| YP_009031837.1 | NC_024140_p60 | N4 gp46-like protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 41943 | 42503 |
| YP_009031835.1 | NC_024140_p58 | hypothetical protein | phrog_6026 | unknown function | unknown function | 1 | 41150 | 41515 |
| YP_009031826.1 | NC_024140_p49 | hypothetical protein | phrog_3370 | unknown function | unknown function | -1 | 32944 | 33615 |
| YP_009031827.1 | NC_024140_p50 | hypothetical protein | phrog_4047 | unknown function | unknown function | -1 | 33612 | 33911 |
| YP_009031846.1 | NC_024140_p69 | N4 gp53-like protein | phrog_2220 | unknown function | unknown function | -1 | 56809 | 59043 |
| YP_009031778.1 | NC_024140_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5 | 454 |
| YP_009031820.1 | NC_024140_p43 | hypothetical protein | phrog_8796 | unknown function | unknown function | 1 | 27404 | 27991 |
| YP_009031819.1 | NC_024140_p42 | hypothetical protein | phrog_8307 | unknown function | unknown function | 1 | 27112 | 27441 |
| YP_009031839.1 | NC_024140_p62 | hypothetical protein | phrog_7212 | unknown function | unknown function | 1 | 43010 | 43414 |
| YP_009031818.1 | NC_024140_p41 | hypothetical protein | phrog_6854 | holin | lysis | 1 | 26826 | 27200 |
| YP_009031842.1 | NC_024140_p65 | hypothetical protein | phrog_8152 | unknown function | unknown function | 1 | 44380 | 44583 |
| YP_009031849.1 | NC_024140_p72 | N4 gp56-like protein | phrog_1357 | major head protein | head and packaging | -1 | 60780 | 61979 |
| YP_009031836.1 | NC_024140_p59 | N4 gp48-like protein | phrog_3934 | unknown function | unknown function | 1 | 41512 | 41955 |
| YP_009031852.1 | NC_024140_p75 | N4 gp59-like protein | phrog_1216 | portal protein | head and packaging | -1 | 63612 | 65792 |
| YP_009031806.1 | NC_024140_p29 | hypothetical protein | phrog_4781 | unknown function | unknown function | 1 | 13306 | 13548 |