| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024142 |
Definition |
Enterobacteria phage Bp4, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus. |
DB of origin |
REFSEQ |
Length |
72583 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
42.88 |
Number of singletons |
17 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009031998.1 | NC_024142_p31 | hypothetical protein | phrog_872 | unknown function | unknown function | -1 | 35703 | 36194 |
| YP_009032045.1 | NC_024142_p81 | hypothetical protein | phrog_2072 | unknown function | unknown function | -1 | 68128 | 68511 |
| YP_009032021.1 | NC_024142_p58 | thymidilate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 57137 | 58081 |
| YP_009032031.1 | NC_024142_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61720 | 61953 |
| YP_009113210.1 | NC_024142_p4 | hypothetical protein | phrog_11661 | unknown function | unknown function | -1 | 1396 | 1698 |
| YP_009032038.1 | NC_024142_p74 | hypothetical protein | phrog_26763 | unknown function | unknown function | -1 | 64030 | 64290 |
| YP_009113228.1 | NC_024142_p51 | rIIA-like protein | singleton | unknown function | unknown function | -1 | 53534 | 53779 |
| YP_009032022.1 | NC_024142_p59 | hypothetical protein | phrog_9867 | unknown function | unknown function | -1 | 58081 | 58524 |
| YP_009113219.1 | NC_024142_p36 | ssDNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 40042 | 40845 |
| YP_009032041.1 | NC_024142_p77 | RNA polymerase RNAP2 subunit A | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 65575 | 66792 |
| YP_009113226.1 | NC_024142_p48 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | -1 | 50638 | 50976 |
| YP_009031970.1 | NC_024142_p10 | tail fiber protein | phrog_12242 | tail protein | tail | 1 | 5713 | 7515 |
| YP_009031957.1 | NC_024142_p91 | hypothetical protein | phrog_7648 | unknown function | unknown function | -1 | 70897 | 71025 |
| YP_009031976.1 | NC_024142_p14 | tail length tape-measure protein | phrog_5211 | unknown function | unknown function | 1 | 11380 | 11709 |
| YP_009032035.1 | NC_024142_p71 | hypothetical protein | phrog_18793 | unknown function | unknown function | -1 | 63318 | 63527 |
| YP_009032025.1 | NC_024142_p62 | hypothetical protein | phrog_7594 | unknown function | unknown function | -1 | 59337 | 59546 |
| YP_009113224.1 | NC_024142_p44 | DNA polymerase | singleton | unknown function | unknown function | -1 | 46167 | 46661 |
| YP_009113223.1 | NC_024142_p41 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44820 | 45317 |
| YP_009113221.1 | NC_024142_p38 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 41694 | 43586 |
| YP_009032009.1 | NC_024142_p43 | hypothetical protein | phrog_5974 | unknown function | unknown function | -1 | 45865 | 46170 |
| YP_009031979.2 | NC_024142_p20 | tape measure protein | phrog_2120 | tail length tape measure protein | tail | 1 | 15717 | 16937 |
| YP_009031999.1 | NC_024142_p32 | hypothetical protein | phrog_322 | unknown function | unknown function | -1 | 36313 | 36693 |
| YP_009031980.1 | NC_024142_p17 | Rz/Rzl spanin protein | phrog_20026 | Rz-like spanin | lysis | 1 | 12842 | 13066 |
| YP_009113233.1 | NC_024142_p70 | hypothetical protein | phrog_7665 | unknown function | unknown function | -1 | 63136 | 63321 |
| YP_009032023.1 | NC_024142_p60 | hypothetical protein | phrog_12812 | unknown function | unknown function | -1 | 58524 | 58904 |
| YP_009032044.1 | NC_024142_p80 | hypothetical protein | phrog_14487 | unknown function | unknown function | -1 | 67871 | 68131 |
| YP_009031981.1 | NC_024142_p18 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 13069 | 15339 |
| YP_009113229.1 | NC_024142_p52 | rIIA-like protein | singleton | unknown function | unknown function | -1 | 53881 | 55263 |
| YP_009032026.1 | NC_024142_p63 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 59556 | 60062 |
| YP_009032040.1 | NC_024142_p76 | hypothetical protein | phrog_12530 | unknown function | unknown function | -1 | 65335 | 65517 |
| YP_009031956.1 | NC_024142_p90 | hypothetical protein | phrog_464 | unknown function | unknown function | -1 | 70510 | 70818 |
| YP_009032006.1 | NC_024142_p40 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43843 | 44823 |
| YP_009113236.1 | NC_024142_p94 | RNA polymerase RNAP1 subunit A | phrog_4099 | unknown function | unknown function | -1 | 71518 | 71898 |
| YP_009031969.1 | NC_024142_p9 | tail protein | phrog_2125 | virion structural protein | head and packaging | 1 | 5012 | 5722 |
| YP_009113212.1 | NC_024142_p12 | tail spike protein | phrog_4217 | tail protein | tail | 1 | 8484 | 10598 |
| YP_009031955.2 | NC_024142_p5 | hypothetical protein | phrog_9160 | unknown function | unknown function | -1 | 1685 | 2074 |
| YP_009031986.1 | NC_024142_p22 | hypothetical protein | phrog_2130 | unknown function | unknown function | 1 | 18230 | 18865 |
| YP_009032033.1 | NC_024142_p69 | hypothetical protein | phrog_11132 | unknown function | unknown function | -1 | 62806 | 63135 |
| YP_009032036.1 | NC_024142_p72 | hypothetical protein | phrog_19185 | unknown function | unknown function | -1 | 63524 | 63784 |
| YP_009031971.1 | NC_024142_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7521 | 8435 |
| YP_009113230.1 | NC_024142_p61 | membrane immunity protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 59060 | 59263 |
| YP_009032017.1 | NC_024142_p54 | hypothetical protein | phrog_7471 | unknown function | unknown function | -1 | 56127 | 56318 |
| YP_009031977.1 | NC_024142_p15 | holin protein | phrog_1356 | holin | lysis | 1 | 11694 | 11954 |
| YP_009113231.1 | NC_024142_p64 | hypothetical protein | phrog_30358 | unknown function | unknown function | -1 | 60062 | 60580 |
| YP_009113220.1 | NC_024142_p37 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 40885 | 41637 |
| YP_009031968.1 | NC_024142_p8 | terminase subunit A | phrog_38 | terminase large subunit | head and packaging | 1 | 3416 | 5005 |
| YP_009113213.1 | NC_024142_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19780 | 20916 |
| YP_009113232.1 | NC_024142_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60635 | 61234 |
| YP_009113227.1 | NC_024142_p49 | hypothetical protein | phrog_6377 | unknown function | unknown function | -1 | 51023 | 51418 |
| YP_009031962.2 | NC_024142_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1076 | 1249 |
| YP_009032018.1 | NC_024142_p55 | hypothetical protein | phrog_9004 | unknown function | unknown function | -1 | 56311 | 56637 |
| YP_009031982.1 | NC_024142_p19 | hypothetical protein | phrog_2346 | unknown function | unknown function | 1 | 15353 | 15697 |
| YP_009032046.2 | NC_024142_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68588 | 68692 |
| YP_009113225.1 | NC_024142_p45 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 46948 | 48633 |
| YP_009113217.1 | NC_024142_p29 | structural protein | singleton | unknown function | unknown function | 1 | 24026 | 24862 |
| YP_009031952.1 | NC_024142_p86 | hypothetical protein | phrog_24669 | unknown function | unknown function | -1 | 69618 | 69809 |
| YP_009032014.1 | NC_024142_p50 | rllB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | -1 | 51481 | 53529 |
| YP_009032019.1 | NC_024142_p56 | hypothetical protein | phrog_7900 | unknown function | unknown function | -1 | 56630 | 56842 |
| YP_009113218.1 | NC_024142_p30 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 24956 | 35668 |
| YP_009031954.1 | NC_024142_p88 | hypothetical protein | phrog_6887 | unknown function | unknown function | -1 | 70060 | 70281 |
| YP_009032027.2 | NC_024142_p73 | hypothetical protein | phrog_7508 | unknown function | unknown function | -1 | 63781 | 63969 |
| YP_009031967.1 | NC_024142_p7 | hypothetical protein | phrog_2109 | unknown function | unknown function | 1 | 2734 | 3423 |
| YP_009032002.1 | NC_024142_p35 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 39488 | 40042 |
| YP_009113234.1 | NC_024142_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68689 | 68832 |
| YP_009113215.1 | NC_024142_p27 | structural protein | singleton | unknown function | unknown function | 1 | 22903 | 23769 |
| YP_009031951.1 | NC_024142_p85 | hypothetical protein | phrog_7827 | unknown function | unknown function | -1 | 69307 | 69621 |
| YP_009031959.1 | NC_024142_p93 | hypothetical protein | phrog_13158 | unknown function | unknown function | -1 | 71189 | 71377 |
| YP_009032001.1 | NC_024142_p34 | hypothetical protein | phrog_7641 | unknown function | unknown function | -1 | 39046 | 39486 |
| YP_009113214.1 | NC_024142_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21108 | 22433 |
| YP_009031985.1 | NC_024142_p21 | major coat protein | phrog_1357 | major head protein | head and packaging | 1 | 16954 | 18156 |
| YP_009113211.1 | NC_024142_p6 | hypothetical protein | phrog_7213 | unknown function | unknown function | -1 | 2274 | 2564 |
| YP_009032030.1 | NC_024142_p66 | hypothetical protein | phrog_4578 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 61234 | 61545 |
| YP_009032008.1 | NC_024142_p42 | hypothetical protein | phrog_9919 | unknown function | unknown function | -1 | 45389 | 45865 |
| YP_009032039.1 | NC_024142_p75 | capsid decorating protein | phrog_2973 | Hoc-like head decoration | head and packaging | -1 | 64428 | 65261 |
| YP_009032010.1 | NC_024142_p46 | hypothetical protein | phrog_4881 | unknown function | unknown function | -1 | 48753 | 49283 |
| YP_009031953.1 | NC_024142_p87 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 69806 | 70063 |
| YP_009031975.1 | NC_024142_p13 | hypothetical protein | phrog_17779 | unknown function | unknown function | -1 | 10629 | 11282 |
| YP_009031950.1 | NC_024142_p84 | hypothetical protein | phrog_464 | unknown function | unknown function | -1 | 68930 | 69310 |
| YP_009032042.1 | NC_024142_p78 | hypothetical protein | phrog_15352 | unknown function | unknown function | -1 | 66848 | 67009 |
| YP_009113235.1 | NC_024142_p89 | hypothetical protein | phrog_20151 | unknown function | unknown function | -1 | 70287 | 70517 |
| YP_009032000.1 | NC_024142_p33 | hypothetical protein | phrog_14773 | unknown function | unknown function | -1 | 38611 | 38811 |
| YP_009032016.1 | NC_024142_p53 | rIIA-like protein | singleton | unknown function | unknown function | -1 | 55281 | 56099 |
| YP_009113222.1 | NC_024142_p39 | DNA primase | singleton | unknown function | unknown function | -1 | 43583 | 43726 |
| YP_009032020.1 | NC_024142_p57 | hypothetical protein | phrog_12633 | unknown function | unknown function | -1 | 56902 | 57117 |
| YP_009032032.1 | NC_024142_p68 | hypothetical protein | phrog_16335 | ATPase | other | -1 | 61965 | 62771 |
| YP_009031992.1 | NC_024142_p26 | structural protein | phrog_2646 | unknown function | unknown function | 1 | 22447 | 22890 |
| YP_009031972.2 | NC_024142_p16 | N-acetylmuramidase | phrog_315 | endolysin | lysis | 1 | 11944 | 12579 |
| YP_009031958.1 | NC_024142_p92 | hypothetical protein | phrog_5407 | unknown function | unknown function | -1 | 71010 | 71192 |
| YP_009031987.1 | NC_024142_p23 | structural protein | phrog_2050 | virion structural protein | head and packaging | 1 | 18942 | 19778 |
| YP_009032043.1 | NC_024142_p79 | RNA polymerase RNAP1 subunit B | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 66999 | 67817 |
| YP_009032011.1 | NC_024142_p47 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | -1 | 49294 | 50604 |
| YP_009031961.2 | NC_024142_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 793 | 948 |
| YP_009113216.1 | NC_024142_p28 | structural protein | singleton | unknown function | unknown function | 1 | 23766 | 24029 |
| YP_009031960.2 | NC_024142_p1 | hypothetical protein | phrog_1365 | unknown function | unknown function | -1 | 470 | 796 |