Genomic map of Escherichia phage Bp4 (NC_024142)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024142
Definition
Enterobacteria phage Bp4, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus.
DB of origin
REFSEQ
Length
72583
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
42.88
Number of singletons
17
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009031998.1 NC_024142_p31 hypothetical protein phrog_872 unknown function unknown function -1 35703 36194
YP_009032045.1 NC_024142_p81 hypothetical protein phrog_2072 unknown function unknown function -1 68128 68511
YP_009032021.1 NC_024142_p58 thymidilate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 57137 58081
YP_009032031.1 NC_024142_p67 hypothetical protein singleton unknown function unknown function -1 61720 61953
YP_009113210.1 NC_024142_p4 hypothetical protein phrog_11661 unknown function unknown function -1 1396 1698
YP_009032038.1 NC_024142_p74 hypothetical protein phrog_26763 unknown function unknown function -1 64030 64290
YP_009113228.1 NC_024142_p51 rIIA-like protein singleton unknown function unknown function -1 53534 53779
YP_009032022.1 NC_024142_p59 hypothetical protein phrog_9867 unknown function unknown function -1 58081 58524
YP_009113219.1 NC_024142_p36 ssDNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 40042 40845
YP_009032041.1 NC_024142_p77 RNA polymerase RNAP2 subunit A phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism -1 65575 66792
YP_009113226.1 NC_024142_p48 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 50638 50976
YP_009031970.1 NC_024142_p10 tail fiber protein phrog_12242 tail protein tail 1 5713 7515
YP_009031957.1 NC_024142_p91 hypothetical protein phrog_7648 unknown function unknown function -1 70897 71025
YP_009031976.1 NC_024142_p14 tail length tape-measure protein phrog_5211 unknown function unknown function 1 11380 11709
YP_009032035.1 NC_024142_p71 hypothetical protein phrog_18793 unknown function unknown function -1 63318 63527
YP_009032025.1 NC_024142_p62 hypothetical protein phrog_7594 unknown function unknown function -1 59337 59546
YP_009113224.1 NC_024142_p44 DNA polymerase singleton unknown function unknown function -1 46167 46661
YP_009113223.1 NC_024142_p41 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 44820 45317
YP_009113221.1 NC_024142_p38 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism -1 41694 43586
YP_009032009.1 NC_024142_p43 hypothetical protein phrog_5974 unknown function unknown function -1 45865 46170
YP_009031979.2 NC_024142_p20 tape measure protein phrog_2120 tail length tape measure protein tail 1 15717 16937
YP_009031999.1 NC_024142_p32 hypothetical protein phrog_322 unknown function unknown function -1 36313 36693
YP_009031980.1 NC_024142_p17 Rz/Rzl spanin protein phrog_20026 Rz-like spanin lysis 1 12842 13066
YP_009113233.1 NC_024142_p70 hypothetical protein phrog_7665 unknown function unknown function -1 63136 63321
YP_009032023.1 NC_024142_p60 hypothetical protein phrog_12812 unknown function unknown function -1 58524 58904
YP_009032044.1 NC_024142_p80 hypothetical protein phrog_14487 unknown function unknown function -1 67871 68131
YP_009031981.1 NC_024142_p18 portal protein phrog_1216 portal protein head and packaging 1 13069 15339
YP_009113229.1 NC_024142_p52 rIIA-like protein singleton unknown function unknown function -1 53881 55263
YP_009032026.1 NC_024142_p63 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism -1 59556 60062
YP_009032040.1 NC_024142_p76 hypothetical protein phrog_12530 unknown function unknown function -1 65335 65517
YP_009031956.1 NC_024142_p90 hypothetical protein phrog_464 unknown function unknown function -1 70510 70818
YP_009032006.1 NC_024142_p40 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism -1 43843 44823
YP_009113236.1 NC_024142_p94 RNA polymerase RNAP1 subunit A phrog_4099 unknown function unknown function -1 71518 71898
YP_009031969.1 NC_024142_p9 tail protein phrog_2125 virion structural protein head and packaging 1 5012 5722
YP_009113212.1 NC_024142_p12 tail spike protein phrog_4217 tail protein tail 1 8484 10598
YP_009031955.2 NC_024142_p5 hypothetical protein phrog_9160 unknown function unknown function -1 1685 2074
YP_009031986.1 NC_024142_p22 hypothetical protein phrog_2130 unknown function unknown function 1 18230 18865
YP_009032033.1 NC_024142_p69 hypothetical protein phrog_11132 unknown function unknown function -1 62806 63135
YP_009032036.1 NC_024142_p72 hypothetical protein phrog_19185 unknown function unknown function -1 63524 63784
YP_009031971.1 NC_024142_p11 hypothetical protein singleton unknown function unknown function 1 7521 8435
YP_009113230.1 NC_024142_p61 membrane immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 59060 59263
YP_009032017.1 NC_024142_p54 hypothetical protein phrog_7471 unknown function unknown function -1 56127 56318
YP_009031977.1 NC_024142_p15 holin protein phrog_1356 holin lysis 1 11694 11954
YP_009113231.1 NC_024142_p64 hypothetical protein phrog_30358 unknown function unknown function -1 60062 60580
YP_009113220.1 NC_024142_p37 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 40885 41637
YP_009031968.1 NC_024142_p8 terminase subunit A phrog_38 terminase large subunit head and packaging 1 3416 5005
YP_009113213.1 NC_024142_p24 hypothetical protein singleton unknown function unknown function 1 19780 20916
YP_009113232.1 NC_024142_p65 hypothetical protein singleton unknown function unknown function -1 60635 61234
YP_009113227.1 NC_024142_p49 hypothetical protein phrog_6377 unknown function unknown function -1 51023 51418
YP_009031962.2 NC_024142_p3 hypothetical protein singleton unknown function unknown function -1 1076 1249
YP_009032018.1 NC_024142_p55 hypothetical protein phrog_9004 unknown function unknown function -1 56311 56637
YP_009031982.1 NC_024142_p19 hypothetical protein phrog_2346 unknown function unknown function 1 15353 15697
YP_009032046.2 NC_024142_p82 hypothetical protein singleton unknown function unknown function -1 68588 68692
YP_009113225.1 NC_024142_p45 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 46948 48633
YP_009113217.1 NC_024142_p29 structural protein singleton unknown function unknown function 1 24026 24862
YP_009031952.1 NC_024142_p86 hypothetical protein phrog_24669 unknown function unknown function -1 69618 69809
YP_009032014.1 NC_024142_p50 rllB-like protein phrog_2886 RIIB lysis inhibitor lysis -1 51481 53529
YP_009032019.1 NC_024142_p56 hypothetical protein phrog_7900 unknown function unknown function -1 56630 56842
YP_009113218.1 NC_024142_p30 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism 1 24956 35668
YP_009031954.1 NC_024142_p88 hypothetical protein phrog_6887 unknown function unknown function -1 70060 70281
YP_009032027.2 NC_024142_p73 hypothetical protein phrog_7508 unknown function unknown function -1 63781 63969
YP_009031967.1 NC_024142_p7 hypothetical protein phrog_2109 unknown function unknown function 1 2734 3423
YP_009032002.1 NC_024142_p35 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 39488 40042
YP_009113234.1 NC_024142_p83 hypothetical protein singleton unknown function unknown function -1 68689 68832
YP_009113215.1 NC_024142_p27 structural protein singleton unknown function unknown function 1 22903 23769
YP_009031951.1 NC_024142_p85 hypothetical protein phrog_7827 unknown function unknown function -1 69307 69621
YP_009031959.1 NC_024142_p93 hypothetical protein phrog_13158 unknown function unknown function -1 71189 71377
YP_009032001.1 NC_024142_p34 hypothetical protein phrog_7641 unknown function unknown function -1 39046 39486
YP_009113214.1 NC_024142_p25 hypothetical protein singleton unknown function unknown function 1 21108 22433
YP_009031985.1 NC_024142_p21 major coat protein phrog_1357 major head protein head and packaging 1 16954 18156
YP_009113211.1 NC_024142_p6 hypothetical protein phrog_7213 unknown function unknown function -1 2274 2564
YP_009032030.1 NC_024142_p66 hypothetical protein phrog_4578 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61234 61545
YP_009032008.1 NC_024142_p42 hypothetical protein phrog_9919 unknown function unknown function -1 45389 45865
YP_009032039.1 NC_024142_p75 capsid decorating protein phrog_2973 Hoc-like head decoration head and packaging -1 64428 65261
YP_009032010.1 NC_024142_p46 hypothetical protein phrog_4881 unknown function unknown function -1 48753 49283
YP_009031953.1 NC_024142_p87 hypothetical protein phrog_1972 unknown function unknown function -1 69806 70063
YP_009031975.1 NC_024142_p13 hypothetical protein phrog_17779 unknown function unknown function -1 10629 11282
YP_009031950.1 NC_024142_p84 hypothetical protein phrog_464 unknown function unknown function -1 68930 69310
YP_009032042.1 NC_024142_p78 hypothetical protein phrog_15352 unknown function unknown function -1 66848 67009
YP_009113235.1 NC_024142_p89 hypothetical protein phrog_20151 unknown function unknown function -1 70287 70517
YP_009032000.1 NC_024142_p33 hypothetical protein phrog_14773 unknown function unknown function -1 38611 38811
YP_009032016.1 NC_024142_p53 rIIA-like protein singleton unknown function unknown function -1 55281 56099
YP_009113222.1 NC_024142_p39 DNA primase singleton unknown function unknown function -1 43583 43726
YP_009032020.1 NC_024142_p57 hypothetical protein phrog_12633 unknown function unknown function -1 56902 57117
YP_009032032.1 NC_024142_p68 hypothetical protein phrog_16335 ATPase other -1 61965 62771
YP_009031992.1 NC_024142_p26 structural protein phrog_2646 unknown function unknown function 1 22447 22890
YP_009031972.2 NC_024142_p16 N-acetylmuramidase phrog_315 endolysin lysis 1 11944 12579
YP_009031958.1 NC_024142_p92 hypothetical protein phrog_5407 unknown function unknown function -1 71010 71192
YP_009031987.1 NC_024142_p23 structural protein phrog_2050 virion structural protein head and packaging 1 18942 19778
YP_009032043.1 NC_024142_p79 RNA polymerase RNAP1 subunit B phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism -1 66999 67817
YP_009032011.1 NC_024142_p47 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 49294 50604
YP_009031961.2 NC_024142_p2 hypothetical protein singleton unknown function unknown function -1 793 948
YP_009113216.1 NC_024142_p28 structural protein singleton unknown function unknown function 1 23766 24029
YP_009031960.2 NC_024142_p1 hypothetical protein phrog_1365 unknown function unknown function -1 470 796