| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024147 |
Definition |
Mycobacterium phage ZoeJ, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
REFSEQ |
Length |
57315 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
68.52 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009032455.1 | NC_024147_p61 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42753 | 43610 |
| YP_009032450.1 | NC_024147_p56 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 40540 | 40935 |
| YP_009032483.1 | NC_024147_p89 | hypothetical protein | phrog_12460 | unknown function | unknown function | 1 | 56156 | 56392 |
| YP_009032399.1 | NC_024147_p5 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2085 | 3584 |
| YP_009032479.1 | NC_024147_p85 | hypothetical protein | phrog_22109 | unknown function | unknown function | 1 | 54677 | 55147 |
| YP_009032417.1 | NC_024147_p23 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 18602 | 20941 |
| YP_009032433.1 | NC_024147_p39 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 30775 | 31158 |
| YP_009032395.1 | NC_024147_p1 | hypothetical protein | phrog_5391 | unknown function | unknown function | 1 | 88 | 222 |
| YP_009032467.1 | NC_024147_p73 | RusA | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 49283 | 49918 |
| YP_009032449.1 | NC_024147_p55 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 39915 | 40547 |
| YP_009032398.1 | NC_024147_p4 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 652 | 2073 |
| YP_009032429.1 | NC_024147_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28793 | 28999 |
| YP_009032430.1 | NC_024147_p36 | transcription factor | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29156 | 29560 |
| YP_009032437.1 | NC_024147_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 33972 | 35072 |
| YP_009032401.1 | NC_024147_p7 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 5049 | 5234 |
| YP_009032446.1 | NC_024147_p52 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 38268 | 39008 |
| YP_009032458.1 | NC_024147_p64 | hypothetical protein | phrog_14762 | unknown function | unknown function | 1 | 44097 | 44417 |
| YP_009032431.1 | NC_024147_p37 | hypothetical protein | phrog_14992 | unknown function | unknown function | 1 | 29557 | 29883 |
| YP_009032409.1 | NC_024147_p15 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 9211 | 10076 |
| YP_009032473.1 | NC_024147_p79 | hypothetical protein | phrog_14958 | unknown function | unknown function | 1 | 52197 | 52334 |
| YP_009032423.1 | NC_024147_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 24755 | 25963 |
| YP_009032465.1 | NC_024147_p71 | DNA primase/helicase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 46264 | 48819 |
| YP_009032439.1 | NC_024147_p45 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 36121 | 36489 |
| YP_009032457.1 | NC_024147_p63 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 43777 | 43995 |
| YP_009032422.1 | NC_024147_p28 | lysin A | phrog_1519 | endolysin | lysis | 1 | 23040 | 24749 |
| YP_009032418.1 | NC_024147_p24 | minor tail protein | phrog_3901 | unknown function | unknown function | 1 | 20942 | 21223 |
| YP_009032470.1 | NC_024147_p76 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 50548 | 51450 |
| YP_009032456.1 | NC_024147_p62 | hypothetical protein | phrog_15653 | unknown function | unknown function | 1 | 43607 | 43780 |
| YP_009032416.1 | NC_024147_p22 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 18364 | 18618 |
| YP_009032414.1 | NC_024147_p20 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 16723 | 17187 |
| YP_009032424.1 | NC_024147_p30 | holin | phrog_565 | holin | lysis | 1 | 25982 | 26392 |
| YP_009032445.1 | NC_024147_p51 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 38060 | 38263 |
| YP_009032442.1 | NC_024147_p48 | hypothetical protein | phrog_15371 | unknown function | unknown function | 1 | 37251 | 37472 |
| YP_009032482.1 | NC_024147_p88 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55979 | 56146 |
| YP_009032410.1 | NC_024147_p16 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 9211 | 9663 |
| YP_009032463.1 | NC_024147_p69 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 45716 | 45883 |
| YP_009032428.1 | NC_024147_p34 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27607 | 28791 |
| YP_009032426.1 | NC_024147_p32 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 26884 | 27375 |
| YP_009032419.1 | NC_024147_p25 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21223 | 22245 |
| YP_009032464.1 | NC_024147_p70 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45880 | 46251 |
| YP_009032451.1 | NC_024147_p57 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40928 | 41206 |
| YP_009032400.1 | NC_024147_p6 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 3565 | 5052 |
| YP_009032440.1 | NC_024147_p46 | Cro-like protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36666 | 36992 |
| YP_009032406.1 | NC_024147_p12 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 7662 | 7913 |
| YP_009032481.1 | NC_024147_p87 | hypothetical protein | phrog_15374 | unknown function | unknown function | 1 | 55593 | 55982 |
| YP_009032438.1 | NC_024147_p44 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 35175 | 36029 |
| YP_009032435.1 | NC_024147_p41 | hypothetical protein | phrog_4095 | unknown function | unknown function | 1 | 31857 | 32555 |
| YP_009032480.1 | NC_024147_p86 | hypothetical protein | phrog_6135 | unknown function | unknown function | 1 | 55266 | 55529 |
| YP_009032448.1 | NC_024147_p54 | hypothetical protein | phrog_15484 | hydrolase | other | 1 | 39235 | 39918 |
| YP_009032469.1 | NC_024147_p75 | hypothetical protein | phrog_15365 | unknown function | unknown function | 1 | 50226 | 50555 |
| YP_009032402.1 | NC_024147_p8 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 5306 | 5842 |
| YP_009032447.1 | NC_024147_p53 | WhiB-like transcriptional regulator | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 39008 | 39238 |
| YP_009032425.1 | NC_024147_p31 | hypothetical protein | phrog_1298 | minor tail protein | tail | 1 | 26475 | 26894 |
| YP_009032459.1 | NC_024147_p65 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 44414 | 44623 |
| YP_009032396.1 | NC_024147_p2 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 224 | 436 |
| YP_009032421.1 | NC_024147_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22641 | 23009 |
| YP_009032404.1 | NC_024147_p10 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6927 | 7310 |
| YP_009032403.1 | NC_024147_p9 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5897 | 6814 |
| YP_009032468.1 | NC_024147_p74 | hypothetical protein | phrog_17570 | unknown function | unknown function | 1 | 49918 | 50229 |
| YP_009032478.1 | NC_024147_p84 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 54414 | 54614 |
| YP_009032461.1 | NC_024147_p67 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 44866 | 45384 |
| YP_009032475.1 | NC_024147_p81 | SprT-like protein | phrog_1006 | unknown function | unknown function | 1 | 52756 | 53337 |
| YP_009032476.1 | NC_024147_p82 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 53369 | 54163 |
| YP_009032407.1 | NC_024147_p13 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 7910 | 8329 |
| YP_009032454.1 | NC_024147_p60 | hydrolase | phrog_789 | esterase/lipase | other | 1 | 41932 | 42756 |
| YP_009032436.1 | NC_024147_p42 | hypothetical protein | phrog_1279 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 32676 | 33515 |
| YP_009032453.1 | NC_024147_p59 | DnaQ | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 41402 | 41935 |
| YP_009032462.1 | NC_024147_p68 | NrdH-like glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 45471 | 45716 |
| YP_009032474.1 | NC_024147_p80 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 52392 | 52703 |
| YP_009032415.1 | NC_024147_p21 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 17280 | 18359 |
| YP_009032432.1 | NC_024147_p38 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30003 | 30707 |
| YP_009032427.1 | NC_024147_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 27372 | 27620 |
| YP_009032413.1 | NC_024147_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14954 | 16723 |
| YP_009032484.1 | NC_024147_p90 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 56403 | 56699 |
| YP_009032486.1 | NC_024147_p92 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 56879 | 57157 |
| YP_009032405.1 | NC_024147_p11 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 7310 | 7669 |
| YP_009032441.1 | NC_024147_p47 | Xis | phrog_1840 | excisionase | integration and excision | 1 | 36989 | 37246 |
| YP_009032444.1 | NC_024147_p50 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 37766 | 38047 |
| YP_009032411.1 | NC_024147_p17 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 10077 | 13724 |
| YP_009032485.1 | NC_024147_p91 | hypothetical protein | phrog_15574 | unknown function | unknown function | 1 | 56712 | 56882 |
| YP_009032471.1 | NC_024147_p77 | hypothetical protein | phrog_6045 | unknown function | unknown function | 1 | 51447 | 51908 |
| YP_009032472.1 | NC_024147_p78 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 51905 | 52174 |
| YP_009032420.1 | NC_024147_p26 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 22259 | 22486 |
| YP_009032452.1 | NC_024147_p58 | hypothetical protein | phrog_18188 | unknown function | unknown function | 1 | 41203 | 41319 |
| YP_009032434.1 | NC_024147_p40 | queuine tRNA-ribosyltransferase | phrog_806 | unknown function | unknown function | -1 | 31158 | 31721 |
| YP_009032397.1 | NC_024147_p3 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 426 | 674 |
| YP_009032412.1 | NC_024147_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13830 | 14957 |
| YP_009032443.1 | NC_024147_p49 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37545 | 37769 |
| YP_009032466.1 | NC_024147_p72 | hypothetical protein | phrog_27140 | unknown function | unknown function | 1 | 48816 | 49280 |
| YP_009032477.1 | NC_024147_p83 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 54160 | 54420 |
| YP_009032460.1 | NC_024147_p66 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 44678 | 44797 |
| YP_009032408.1 | NC_024147_p14 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 8484 | 9104 |