Genomic map of Mycobacterium phage ZoeJ (NC_024147)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024147
Definition
Mycobacterium phage ZoeJ, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
57315
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
68.52
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009032455.1 NC_024147_p61 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 42753 43610
YP_009032450.1 NC_024147_p56 hypothetical protein phrog_3186 unknown function unknown function 1 40540 40935
YP_009032483.1 NC_024147_p89 hypothetical protein phrog_12460 unknown function unknown function 1 56156 56392
YP_009032399.1 NC_024147_p5 portal protein phrog_104 portal protein head and packaging 1 2085 3584
YP_009032479.1 NC_024147_p85 hypothetical protein phrog_22109 unknown function unknown function 1 54677 55147
YP_009032417.1 NC_024147_p23 minor tail protein phrog_746 minor tail protein tail 1 18602 20941
YP_009032433.1 NC_024147_p39 hypothetical protein phrog_549 unknown function unknown function -1 30775 31158
YP_009032395.1 NC_024147_p1 hypothetical protein phrog_5391 unknown function unknown function 1 88 222
YP_009032467.1 NC_024147_p73 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 49283 49918
YP_009032449.1 NC_024147_p55 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 39915 40547
YP_009032398.1 NC_024147_p4 terminase phrog_2 terminase large subunit head and packaging 1 652 2073
YP_009032429.1 NC_024147_p35 hypothetical protein singleton unknown function unknown function 1 28793 28999
YP_009032430.1 NC_024147_p36 transcription factor phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29156 29560
YP_009032437.1 NC_024147_p43 integrase phrog_1 integrase integration and excision 1 33972 35072
YP_009032401.1 NC_024147_p7 hypothetical protein phrog_1757 unknown function unknown function 1 5049 5234
YP_009032446.1 NC_024147_p52 hypothetical protein phrog_2286 unknown function unknown function 1 38268 39008
YP_009032458.1 NC_024147_p64 hypothetical protein phrog_14762 unknown function unknown function 1 44097 44417
YP_009032431.1 NC_024147_p37 hypothetical protein phrog_14992 unknown function unknown function 1 29557 29883
YP_009032409.1 NC_024147_p15 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 9211 10076
YP_009032473.1 NC_024147_p79 hypothetical protein phrog_14958 unknown function unknown function 1 52197 52334
YP_009032423.1 NC_024147_p29 lysin B phrog_102 endolysin lysis 1 24755 25963
YP_009032465.1 NC_024147_p71 DNA primase/helicase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 46264 48819
YP_009032439.1 NC_024147_p45 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36121 36489
YP_009032457.1 NC_024147_p63 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 43777 43995
YP_009032422.1 NC_024147_p28 lysin A phrog_1519 endolysin lysis 1 23040 24749
YP_009032418.1 NC_024147_p24 minor tail protein phrog_3901 unknown function unknown function 1 20942 21223
YP_009032470.1 NC_024147_p76 hypothetical protein phrog_908 unknown function unknown function 1 50548 51450
YP_009032456.1 NC_024147_p62 hypothetical protein phrog_15653 unknown function unknown function 1 43607 43780
YP_009032416.1 NC_024147_p22 minor tail protein phrog_1736 minor tail protein tail 1 18364 18618
YP_009032414.1 NC_024147_p20 minor tail protein phrog_1697 minor tail protein tail 1 16723 17187
YP_009032424.1 NC_024147_p30 holin phrog_565 holin lysis 1 25982 26392
YP_009032445.1 NC_024147_p51 hypothetical protein phrog_1622 unknown function unknown function 1 38060 38263
YP_009032442.1 NC_024147_p48 hypothetical protein phrog_15371 unknown function unknown function 1 37251 37472
YP_009032482.1 NC_024147_p88 hypothetical protein phrog_2057 unknown function unknown function 1 55979 56146
YP_009032410.1 NC_024147_p16 tail assembly chaperone phrog_1861 unknown function unknown function 1 9211 9663
YP_009032463.1 NC_024147_p69 hypothetical protein phrog_1091 unknown function unknown function 1 45716 45883
YP_009032428.1 NC_024147_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27607 28791
YP_009032426.1 NC_024147_p32 hypothetical protein phrog_726 unknown function unknown function 1 26884 27375
YP_009032419.1 NC_024147_p25 minor tail protein phrog_416 minor tail protein tail 1 21223 22245
YP_009032464.1 NC_024147_p70 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45880 46251
YP_009032451.1 NC_024147_p57 hypothetical protein phrog_1956 unknown function unknown function 1 40928 41206
YP_009032400.1 NC_024147_p6 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 3565 5052
YP_009032440.1 NC_024147_p46 Cro-like protein phrog_1702 transcriptional repressor transcription regulation 1 36666 36992
YP_009032406.1 NC_024147_p12 hypothetical protein phrog_387 neck protein connector 1 7662 7913
YP_009032481.1 NC_024147_p87 hypothetical protein phrog_15374 unknown function unknown function 1 55593 55982
YP_009032438.1 NC_024147_p44 hypothetical protein phrog_950 unknown function unknown function -1 35175 36029
YP_009032435.1 NC_024147_p41 hypothetical protein phrog_4095 unknown function unknown function 1 31857 32555
YP_009032480.1 NC_024147_p86 hypothetical protein phrog_6135 unknown function unknown function 1 55266 55529
YP_009032448.1 NC_024147_p54 hypothetical protein phrog_15484 hydrolase other 1 39235 39918
YP_009032469.1 NC_024147_p75 hypothetical protein phrog_15365 unknown function unknown function 1 50226 50555
YP_009032402.1 NC_024147_p8 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 5306 5842
YP_009032447.1 NC_024147_p53 WhiB-like transcriptional regulator phrog_472 WhiB transcriptional factor transcription regulation 1 39008 39238
YP_009032425.1 NC_024147_p31 hypothetical protein phrog_1298 minor tail protein tail 1 26475 26894
YP_009032459.1 NC_024147_p65 hypothetical protein phrog_5466 unknown function unknown function 1 44414 44623
YP_009032396.1 NC_024147_p2 hypothetical protein phrog_2622 unknown function unknown function 1 224 436
YP_009032421.1 NC_024147_p27 hypothetical protein phrog_240 head protein head and packaging 1 22641 23009
YP_009032404.1 NC_024147_p10 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 6927 7310
YP_009032403.1 NC_024147_p9 major capsid protein phrog_10 major head protein head and packaging 1 5897 6814
YP_009032468.1 NC_024147_p74 hypothetical protein phrog_17570 unknown function unknown function 1 49918 50229
YP_009032478.1 NC_024147_p84 hypothetical protein phrog_666 unknown function unknown function 1 54414 54614
YP_009032461.1 NC_024147_p67 hypothetical protein phrog_1911 unknown function unknown function 1 44866 45384
YP_009032475.1 NC_024147_p81 SprT-like protein phrog_1006 unknown function unknown function 1 52756 53337
YP_009032476.1 NC_024147_p82 hypothetical protein phrog_2342 unknown function unknown function 1 53369 54163
YP_009032407.1 NC_024147_p13 hypothetical protein phrog_123 tail terminator connector 1 7910 8329
YP_009032454.1 NC_024147_p60 hydrolase phrog_789 esterase/lipase other 1 41932 42756
YP_009032436.1 NC_024147_p42 hypothetical protein phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 32676 33515
YP_009032453.1 NC_024147_p59 DnaQ phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 41402 41935
YP_009032462.1 NC_024147_p68 NrdH-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 45471 45716
YP_009032474.1 NC_024147_p80 hypothetical protein phrog_5546 unknown function unknown function 1 52392 52703
YP_009032415.1 NC_024147_p21 minor tail protein phrog_1565 minor tail protein tail 1 17280 18359
YP_009032432.1 NC_024147_p38 hypothetical protein phrog_2433 unknown function unknown function 1 30003 30707
YP_009032427.1 NC_024147_p33 hypothetical protein phrog_1738 unknown function unknown function 1 27372 27620
YP_009032413.1 NC_024147_p19 minor tail protein phrog_110 minor tail protein tail 1 14954 16723
YP_009032484.1 NC_024147_p90 hypothetical protein phrog_747 unknown function unknown function 1 56403 56699
YP_009032486.1 NC_024147_p92 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56879 57157
YP_009032405.1 NC_024147_p11 hypothetical protein phrog_763 head-tail adaptor connector 1 7310 7669
YP_009032441.1 NC_024147_p47 Xis phrog_1840 excisionase integration and excision 1 36989 37246
YP_009032444.1 NC_024147_p50 hypothetical protein phrog_3903 unknown function unknown function 1 37766 38047
YP_009032411.1 NC_024147_p17 tapemeasure phrog_971 endolysin lysis 1 10077 13724
YP_009032485.1 NC_024147_p91 hypothetical protein phrog_15574 unknown function unknown function 1 56712 56882
YP_009032471.1 NC_024147_p77 hypothetical protein phrog_6045 unknown function unknown function 1 51447 51908
YP_009032472.1 NC_024147_p78 hypothetical protein phrog_1338 unknown function unknown function 1 51905 52174
YP_009032420.1 NC_024147_p26 hypothetical protein phrog_2269 unknown function unknown function 1 22259 22486
YP_009032452.1 NC_024147_p58 hypothetical protein phrog_18188 unknown function unknown function 1 41203 41319
YP_009032434.1 NC_024147_p40 queuine tRNA-ribosyltransferase phrog_806 unknown function unknown function -1 31158 31721
YP_009032397.1 NC_024147_p3 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 426 674
YP_009032412.1 NC_024147_p18 minor tail protein phrog_106 minor tail protein tail 1 13830 14957
YP_009032443.1 NC_024147_p49 hypothetical protein phrog_2654 unknown function unknown function 1 37545 37769
YP_009032466.1 NC_024147_p72 hypothetical protein phrog_27140 unknown function unknown function 1 48816 49280
YP_009032477.1 NC_024147_p83 hypothetical protein phrog_3868 unknown function unknown function 1 54160 54420
YP_009032460.1 NC_024147_p66 hypothetical protein phrog_2388 unknown function unknown function 1 44678 44797
YP_009032408.1 NC_024147_p14 major tail subunit phrog_117 major tail protein tail 1 8484 9104