Genomic map of Lactoccocus phage WP-2 (NC_024149)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024149
Definition
Lactoccocus phage WP-2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Picovirinae; Negarvirus; Lactococcus virus WP2.
DB of origin
REFSEQ
Length
18899
Host Name
Lactococcus garvieae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
24
%GC
31.11
Number of singletons
14
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009032587.1 NC_024149_p10 hypothetical protein phrog_16072 unknown function unknown function 1 7332 7613
YP_009032592.1 NC_024149_p15 endolysin singleton unknown function unknown function 1 8941 10320
YP_009032596.1 NC_024149_p19 holin phrog_199 holin lysis -1 12859 13245
YP_009032578.1 NC_024149_p1 hypothetical protein phrog_8577 endolysin lysis 1 579 1262
YP_009032591.1 NC_024149_p14 hypothetical protein singleton unknown function unknown function 1 8615 8890
YP_009032594.1 NC_024149_p17 major tail protein phrog_2248 tail protein tail -1 10857 12590
YP_009032580.1 NC_024149_p3 hypothetical protein singleton unknown function unknown function 1 1621 1827
YP_009032601.1 NC_024149_p24 hypothetical protein singleton unknown function unknown function -1 18431 18613
YP_009032589.1 NC_024149_p12 hypothetical protein singleton unknown function unknown function 1 8093 8338
YP_009032586.1 NC_024149_p9 hypothetical protein singleton unknown function unknown function 1 7078 7335
YP_009032593.1 NC_024149_p16 hypothetical protein singleton unknown function unknown function 1 10322 10828
YP_009032595.1 NC_024149_p18 hypothetical protein singleton unknown function unknown function -1 12628 12858
YP_009032600.1 NC_024149_p23 major capsid protein phrog_2006 major head protein head and packaging -1 16978 18354
YP_009032598.1 NC_024149_p21 lower collar protein phrog_3225 adaptor Ad4 connector -1 15207 15851
YP_009032583.1 NC_024149_p6 hypothetical protein singleton unknown function unknown function 1 3626 4162
YP_009032584.1 NC_024149_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4285 6684
YP_009032590.1 NC_024149_p13 hypothetical protein singleton unknown function unknown function 1 8341 8622
YP_009032581.1 NC_024149_p4 hypothetical protein singleton unknown function unknown function 1 1831 2229
YP_009032597.1 NC_024149_p20 tail spike phrog_4636 tail spike protein tail -1 13242 15188
YP_009032599.1 NC_024149_p22 upper collar protein phrog_2038 upper collar connector connector -1 15844 16875
YP_009032582.1 NC_024149_p5 encapsidation protein phrog_2150 terminase head and packaging 1 2219 3511
YP_009032579.1 NC_024149_p2 hypothetical protein singleton unknown function unknown function 1 1277 1624
YP_009032585.1 NC_024149_p8 hypothetical protein singleton unknown function unknown function 1 6825 7076
YP_009032588.1 NC_024149_p11 hypothetical protein singleton unknown function unknown function 1 7617 8096