| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024204 |
Definition |
Salmonella phage vB_SenS-Ent3 complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus. |
DB of origin |
REFSEQ |
Length |
42764 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
49.79 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009035184.1 | NC_024204_p47 | hypothetical protein | phrog_3766 | unknown function | unknown function | 1 | 38702 | 38905 |
| YP_009035158.1 | NC_024204_p21 | hypothetical protein | phrog_2452 | unknown function | unknown function | -1 | 13611 | 13841 |
| YP_009035196.1 | NC_024204_p59 | hypothetical protein | phrog_2531 | unknown function | unknown function | 1 | 42133 | 42411 |
| YP_009035163.1 | NC_024204_p26 | hypothetical protein | phrog_4557 | unknown function | unknown function | 1 | 16355 | 16714 |
| YP_009035197.1 | NC_024204_p60 | hypothetical protein | phrog_10956 | unknown function | unknown function | 1 | 42427 | 42609 |
| YP_009035167.1 | NC_024204_p30 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 20051 | 20416 |
| YP_009035178.1 | NC_024204_p41 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 33884 | 34414 |
| YP_009035192.1 | NC_024204_p55 | hypothetical protein | phrog_4684 | unknown function | unknown function | 1 | 41360 | 41515 |
| YP_009035160.1 | NC_024204_p23 | serine/threonine protein phosphatase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 14367 | 15521 |
| YP_009035145.1 | NC_024204_p8 | hypothetical protein | phrog_5672 | Rz-like spanin | lysis | 1 | 6339 | 6482 |
| YP_009035157.1 | NC_024204_p20 | DNA-binding protein | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 12828 | 13499 |
| YP_009035175.1 | NC_024204_p38 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31533 | 32159 |
| YP_009035170.1 | NC_024204_p33 | hypothetical protein | phrog_5915 | unknown function | unknown function | -1 | 25151 | 25321 |
| YP_009035150.1 | NC_024204_p13 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 9151 | 9339 |
| YP_009035146.1 | NC_024204_p9 | scaffold protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 6567 | 7268 |
| YP_009035173.1 | NC_024204_p36 | restriction endonuclease | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28003 | 28290 |
| YP_009035139.1 | NC_024204_p2 | phage terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 562 | 1833 |
| YP_009035159.1 | NC_024204_p22 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 13851 | 14351 |
| YP_009035185.1 | NC_024204_p48 | hypothetical protein | phrog_4947 | unknown function | unknown function | 1 | 38908 | 39279 |
| YP_009035193.1 | NC_024204_p56 | hypothetical protein | phrog_1402 | unknown function | unknown function | 1 | 41512 | 41745 |
| YP_009035149.1 | NC_024204_p12 | Hoc protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 8764 | 9114 |
| YP_009035181.1 | NC_024204_p44 | uvsX-like protein | phrog_5169 | unknown function | unknown function | -1 | 37024 | 37257 |
| YP_009035144.1 | NC_024204_p7 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | 1 | 5987 | 6373 |
| YP_009035142.1 | NC_024204_p5 | head morphogenesis protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 4165 | 5208 |
| YP_009035141.1 | NC_024204_p4 | hypothetical protein | phrog_6095 | amidase | lysis | -1 | 3349 | 3999 |
| YP_009035168.1 | NC_024204_p31 | tail fibre protein | phrog_469 | tail protein | tail | 1 | 20407 | 22965 |
| YP_009035174.1 | NC_024204_p37 | intein-containing DNA polymerase precursor | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28377 | 31475 |
| YP_009035156.1 | NC_024204_p19 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 11630 | 12799 |
| YP_009035169.1 | NC_024204_p32 | tailspike protein | phrog_1819 | tail spike protein | tail | 1 | 22978 | 25032 |
| YP_009035151.1 | NC_024204_p14 | head-tail joining protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 9343 | 9852 |
| YP_009035191.1 | NC_024204_p54 | hypothetical protein | phrog_3002 | unknown function | unknown function | 1 | 41205 | 41363 |
| YP_009035183.1 | NC_024204_p46 | hypothetical protein | phrog_18511 | unknown function | unknown function | 1 | 38424 | 38705 |
| YP_009035165.1 | NC_024204_p28 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 19099 | 19542 |
| YP_009035180.1 | NC_024204_p43 | phage replicative helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 34781 | 36967 |
| YP_009035153.1 | NC_024204_p16 | head-tail joining protein | phrog_161 | head closure Hc1 | connector | 1 | 10460 | 10819 |
| YP_009035187.1 | NC_024204_p50 | hypothetical protein | phrog_2359 | holin | lysis | 1 | 39799 | 40080 |
| YP_009035152.1 | NC_024204_p15 | hypothetical protein | phrog_3614 | unknown function | unknown function | 1 | 9855 | 10460 |
| YP_009035190.1 | NC_024204_p53 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 41023 | 41208 |
| YP_009035176.1 | NC_024204_p39 | hypothetical protein | phrog_13603 | unknown function | unknown function | -1 | 32241 | 32417 |
| YP_009035182.1 | NC_024204_p45 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 37254 | 37424 |
| YP_009035154.1 | NC_024204_p17 | strucutral protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 10816 | 11211 |
| YP_009035188.1 | NC_024204_p51 | holin, class II | phrog_2508 | holin | lysis | 1 | 40082 | 40369 |
| YP_009035161.1 | NC_024204_p24 | imm immunity to superinfection membrane protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 15584 | 15763 |
| YP_009035147.1 | NC_024204_p10 | major coat protein | phrog_247 | major head protein | head and packaging | 1 | 7272 | 8321 |
| YP_009035179.1 | NC_024204_p42 | DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34548 | 34766 |
| YP_009035186.1 | NC_024204_p49 | hypothetical protein | phrog_1040 | peptidase HslV family | other | 1 | 39285 | 39719 |
| YP_009035195.1 | NC_024204_p58 | NinH-like protein | phrog_268 | unknown function | unknown function | 1 | 41888 | 42115 |
| YP_009035164.1 | NC_024204_p27 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 16707 | 19040 |
| YP_009035148.1 | NC_024204_p11 | head fibre protein | phrog_1954 | virion structural protein | head and packaging | 1 | 8381 | 8752 |
| YP_009035143.1 | NC_024204_p6 | head decoration protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 5211 | 5669 |
| YP_009035194.1 | NC_024204_p57 | hypothetical protein | phrog_10200 | unknown function | unknown function | 1 | 41742 | 41891 |
| YP_009035189.1 | NC_024204_p52 | lysozyme | phrog_7 | endolysin | lysis | 1 | 40350 | 40838 |
| YP_009035140.1 | NC_024204_p3 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 1846 | 3318 |
| YP_009035172.1 | NC_024204_p35 | hypothetical protein | phrog_4879 | unknown function | unknown function | -1 | 27780 | 27971 |
| YP_009035162.1 | NC_024204_p25 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 15933 | 16349 |
| YP_009035166.1 | NC_024204_p29 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 19539 | 20054 |
| YP_009035138.1 | NC_024204_p1 | phage terminase, small subunit | phrog_3064 | terminase | head and packaging | 1 | 66 | 572 |
| YP_009035171.1 | NC_024204_p34 | intein containing helicase precursor | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25318 | 27783 |
| YP_009035155.1 | NC_024204_p18 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 11211 | 11630 |
| YP_009035177.1 | NC_024204_p40 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 32417 | 33841 |