Genomic map of Salmonella phage vB_SenS-Ent3 (NC_024204)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024204
Definition
Salmonella phage vB_SenS-Ent3 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus.
DB of origin
REFSEQ
Length
42764
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
49.79
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009035184.1 NC_024204_p47 hypothetical protein phrog_3766 unknown function unknown function 1 38702 38905
YP_009035158.1 NC_024204_p21 hypothetical protein phrog_2452 unknown function unknown function -1 13611 13841
YP_009035196.1 NC_024204_p59 hypothetical protein phrog_2531 unknown function unknown function 1 42133 42411
YP_009035163.1 NC_024204_p26 hypothetical protein phrog_4557 unknown function unknown function 1 16355 16714
YP_009035197.1 NC_024204_p60 hypothetical protein phrog_10956 unknown function unknown function 1 42427 42609
YP_009035167.1 NC_024204_p30 hypothetical protein phrog_329 minor tail protein tail 1 20051 20416
YP_009035178.1 NC_024204_p41 hypothetical protein phrog_3127 unknown function unknown function -1 33884 34414
YP_009035192.1 NC_024204_p55 hypothetical protein phrog_4684 unknown function unknown function 1 41360 41515
YP_009035160.1 NC_024204_p23 serine/threonine protein phosphatase phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 14367 15521
YP_009035145.1 NC_024204_p8 hypothetical protein phrog_5672 Rz-like spanin lysis 1 6339 6482
YP_009035157.1 NC_024204_p20 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation -1 12828 13499
YP_009035175.1 NC_024204_p38 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31533 32159
YP_009035170.1 NC_024204_p33 hypothetical protein phrog_5915 unknown function unknown function -1 25151 25321
YP_009035150.1 NC_024204_p13 hypothetical protein phrog_4451 unknown function unknown function 1 9151 9339
YP_009035146.1 NC_024204_p9 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6567 7268
YP_009035173.1 NC_024204_p36 restriction endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 28003 28290
YP_009035139.1 NC_024204_p2 phage terminase, large subunit phrog_2 terminase large subunit head and packaging 1 562 1833
YP_009035159.1 NC_024204_p22 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 13851 14351
YP_009035185.1 NC_024204_p48 hypothetical protein phrog_4947 unknown function unknown function 1 38908 39279
YP_009035193.1 NC_024204_p56 hypothetical protein phrog_1402 unknown function unknown function 1 41512 41745
YP_009035149.1 NC_024204_p12 Hoc protein phrog_4069 Hoc-like head decoration head and packaging 1 8764 9114
YP_009035181.1 NC_024204_p44 uvsX-like protein phrog_5169 unknown function unknown function -1 37024 37257
YP_009035144.1 NC_024204_p7 hypothetical protein phrog_2536 Rz-like spanin lysis 1 5987 6373
YP_009035142.1 NC_024204_p5 head morphogenesis protein, SPP1family phrog_241 head morphogenesis head and packaging 1 4165 5208
YP_009035141.1 NC_024204_p4 hypothetical protein phrog_6095 amidase lysis -1 3349 3999
YP_009035168.1 NC_024204_p31 tail fibre protein phrog_469 tail protein tail 1 20407 22965
YP_009035174.1 NC_024204_p37 intein-containing DNA polymerase precursor phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28377 31475
YP_009035156.1 NC_024204_p19 major tail protein phrog_290 minor tail protein tail 1 11630 12799
YP_009035169.1 NC_024204_p32 tailspike protein phrog_1819 tail spike protein tail 1 22978 25032
YP_009035151.1 NC_024204_p14 head-tail joining protein phrog_477 head-tail adaptor Ad1 connector 1 9343 9852
YP_009035191.1 NC_024204_p54 hypothetical protein phrog_3002 unknown function unknown function 1 41205 41363
YP_009035183.1 NC_024204_p46 hypothetical protein phrog_18511 unknown function unknown function 1 38424 38705
YP_009035165.1 NC_024204_p28 hypothetical protein phrog_384 virion structural protein head and packaging 1 19099 19542
YP_009035180.1 NC_024204_p43 phage replicative helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 34781 36967
YP_009035153.1 NC_024204_p16 head-tail joining protein phrog_161 head closure Hc1 connector 1 10460 10819
YP_009035187.1 NC_024204_p50 hypothetical protein phrog_2359 holin lysis 1 39799 40080
YP_009035152.1 NC_024204_p15 hypothetical protein phrog_3614 unknown function unknown function 1 9855 10460
YP_009035190.1 NC_024204_p53 hypothetical protein phrog_2180 unknown function unknown function 1 41023 41208
YP_009035176.1 NC_024204_p39 hypothetical protein phrog_13603 unknown function unknown function -1 32241 32417
YP_009035182.1 NC_024204_p45 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision -1 37254 37424
YP_009035154.1 NC_024204_p17 strucutral protein phrog_169 tail completion or Neck1 protein connector 1 10816 11211
YP_009035188.1 NC_024204_p51 holin, class II phrog_2508 holin lysis 1 40082 40369
YP_009035161.1 NC_024204_p24 imm immunity to superinfection membrane protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 15584 15763
YP_009035147.1 NC_024204_p10 major coat protein phrog_247 major head protein head and packaging 1 7272 8321
YP_009035179.1 NC_024204_p42 DNA-binding protein phrog_3 transcriptional repressor transcription regulation 1 34548 34766
YP_009035186.1 NC_024204_p49 hypothetical protein phrog_1040 peptidase HslV family other 1 39285 39719
YP_009035195.1 NC_024204_p58 NinH-like protein phrog_268 unknown function unknown function 1 41888 42115
YP_009035164.1 NC_024204_p27 tape measure protein phrog_1538 tail length tape measure protein tail 1 16707 19040
YP_009035148.1 NC_024204_p11 head fibre protein phrog_1954 virion structural protein head and packaging 1 8381 8752
YP_009035143.1 NC_024204_p6 head decoration protein phrog_3945 Hoc-like head decoration head and packaging 1 5211 5669
YP_009035194.1 NC_024204_p57 hypothetical protein phrog_10200 unknown function unknown function 1 41742 41891
YP_009035189.1 NC_024204_p52 lysozyme phrog_7 endolysin lysis 1 40350 40838
YP_009035140.1 NC_024204_p3 portal protein phrog_145 portal protein head and packaging 1 1846 3318
YP_009035172.1 NC_024204_p35 hypothetical protein phrog_4879 unknown function unknown function -1 27780 27971
YP_009035162.1 NC_024204_p25 hypothetical protein phrog_313 Tail assembly chaperone tail 1 15933 16349
YP_009035166.1 NC_024204_p29 hypothetical protein phrog_396 minor tail protein tail 1 19539 20054
YP_009035138.1 NC_024204_p1 phage terminase, small subunit phrog_3064 terminase head and packaging 1 66 572
YP_009035171.1 NC_024204_p34 intein containing helicase precursor phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 25318 27783
YP_009035155.1 NC_024204_p18 hypothetical protein phrog_179 tail terminator connector 1 11211 11630
YP_009035177.1 NC_024204_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 32417 33841