Genomic map of Lactobacillus phage phi jlb1 (NC_024206)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024206
Definition
Lactobacillus phage phi jlb1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
38269
Host Name
Lactobacillus gasseri
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
37.35
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009035517.1 NC_024206_p50 hypothetical protein phrog_134 unknown function unknown function 1 35473 35667
YP_009035498.1 NC_024206_p31 minor capsid protein phrog_194 head scaffolding protein head and packaging 1 19255 19815
YP_009035478.1 NC_024206_p11 replication protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 5710 6618
YP_009035475.1 NC_024206_p8 hypothetical protein phrog_16169 unknown function unknown function 1 4281 4607
YP_009035483.1 NC_024206_p16 hypothetical protein phrog_1945 unknown function unknown function 1 8434 8682
YP_009035477.1 NC_024206_p10 hypothetical protein phrog_8492 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4891 5694
YP_009035485.1 NC_024206_p18 hypothetical protein phrog_834 unknown function unknown function 1 9129 9485
YP_009035493.1 NC_024206_p26 small terminase subunit phrog_309 terminase small subunit head and packaging 1 14342 14839
YP_009035470.1 NC_024206_p3 hypothetical protein phrog_87 metallo-protease other -1 2143 2595
YP_009035508.1 NC_024206_p41 minor tail protein phrog_1204 tail protein tail 1 25196 28606
YP_009035486.1 NC_024206_p19 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9549 10010
YP_009035469.1 NC_024206_p2 hypothetical protein phrog_6148 beta-lactamase-inhibitor protein BLIP moron, auxiliary metabolic gene and host takeover -1 1455 2078
YP_009035489.1 NC_024206_p22 hypothetical protein phrog_17520 unknown function unknown function 1 10616 10828
YP_009035507.1 NC_024206_p40 core tail protein phrog_389 tail protein XkdN-like tail 1 24540 24959
YP_009035494.1 NC_024206_p27 terminase large subunit, PBSX family phrog_2 terminase large subunit head and packaging 1 14802 16031
YP_009035518.1 NC_024206_p51 hypothetical protein phrog_6664 unknown function unknown function 1 36054 36332
YP_009035495.1 NC_024206_p28 portal protein phrog_64 portal protein head and packaging 1 16022 17434
YP_009035468.1 NC_024206_p1 integrase phrog_1 integrase integration and excision -1 123 1241
YP_009035503.1 NC_024206_p36 hypothetical protein phrog_525 unknown function unknown function 1 22082 22489
YP_009035500.1 NC_024206_p33 hypothetical protein phrog_132 head-tail adaptor connector 1 20906 21295
YP_009035490.1 NC_024206_p23 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 10850 11350
YP_009035481.1 NC_024206_p14 hypothetical protein phrog_17798 unknown function unknown function 1 7670 7882
YP_009035513.1 NC_024206_p46 baseplate protein phrog_6 baseplate wedge subunit tail 1 31042 32193
YP_009035506.1 NC_024206_p39 sheath tail protein phrog_365 tail protein tail 1 24058 24528
YP_009035516.1 NC_024206_p49 hypothetical protein phrog_8791 unknown function unknown function 1 34964 35473
YP_009035509.1 NC_024206_p42 hypothetical protein phrog_380 endolysin lysis 1 28608 29288
YP_009035479.1 NC_024206_p12 toxin-antitoxin system, antitoxin component phrog_8 transcriptional regulator transcription regulation 1 6626 6931
YP_009035502.1 NC_024206_p35 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 21651 22085
YP_009035491.1 NC_024206_p24 ParB protein phrog_620 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 12746 13477
YP_009035476.1 NC_024206_p9 hypothetical protein phrog_7634 unknown function unknown function 1 4607 4885
YP_009035520.1 NC_024206_p53 lysin phrog_291 endolysin lysis 1 36770 37702
YP_009035497.1 NC_024206_p30 hypothetical protein phrog_37770 unknown function unknown function 1 18940 19137
YP_009035473.1 NC_024206_p6 hypothetical protein phrog_823 unknown function unknown function 1 3349 3684
YP_009035519.1 NC_024206_p52 LL-H family holin phrog_10813 holin lysis 1 36329 36760
YP_009035474.1 NC_024206_p7 hypothetical protein phrog_18877 unknown function unknown function 1 3689 3967
YP_009035499.1 NC_024206_p32 major capsid protein phrog_422 major head protein head and packaging 1 19815 20897
YP_009035496.1 NC_024206_p29 minor head protein phrog_595 head maturation protease head and packaging 1 17424 18956
YP_009035511.1 NC_024206_p44 hypothetical protein phrog_579 unknown function unknown function 1 30310 30672
YP_009035488.1 NC_024206_p21 hypothetical protein phrog_16953 unknown function unknown function 1 10320 10619
YP_009035480.1 NC_024206_p13 anti-repressor phrog_63 anti-repressor Ant transcription regulation 1 6924 7670
YP_009035472.1 NC_024206_p5 CI-like repressor phrog_3 transcriptional repressor transcription regulation 1 3092 3316
YP_009035492.1 NC_024206_p25 hypothetical protein phrog_842 beta-glucosyl-HMC-alpha-glucosyltransferase other 1 13467 14321
YP_009035482.1 NC_024206_p15 hypothetical protein phrog_3409 unknown function unknown function 1 8075 8431
YP_009035501.1 NC_024206_p34 hypothetical protein phrog_615 head-tail adaptor connector 1 21292 21654
YP_009035514.1 NC_024206_p47 hypothetical protein phrog_521 tail protein tail 1 32183 32743
YP_009035504.1 NC_024206_p37 hypothetical protein phrog_966 unknown function unknown function 1 22473 22691
YP_009035505.1 NC_024206_p38 hypothetical protein phrog_279 tail sheath tail 1 22691 24046
YP_009035471.1 NC_024206_p4 XRE family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 2600 2938
YP_009035487.1 NC_024206_p20 hypothetical protein singleton unknown function unknown function 1 10124 10330
YP_009035515.1 NC_024206_p48 hypothetical protein phrog_12519 unknown function unknown function 1 32756 34924
YP_009035510.1 NC_024206_p43 late control protein phrog_400 tail protein tail 1 29285 30331
YP_009035521.1 NC_024206_p54 hypothetical protein singleton unknown function unknown function 1 37785 37916
YP_009035484.1 NC_024206_p17 hypothetical protein phrog_22112 unknown function unknown function 1 8679 8921
YP_009035512.1 NC_024206_p45 hypothetical protein phrog_120 baseplate wedge subunit tail 1 30629 31045