Genomic map of Lactococcus phage P118 (NC_024208)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024208
Definition
Lactococcus phage P118, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
54173
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
33.49
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009035873.1 NC_024208_p58 hypothetical protein phrog_301 secreted protein other 1 39263 39610
YP_009035843.1 NC_024208_p28 hypothetical protein phrog_37342 unknown function unknown function 1 24618 25010
YP_009035884.1 NC_024208_p69 hypothetical protein phrog_21453 unknown function unknown function 1 44022 44603
YP_009035833.1 NC_024208_p18 hypothetical protein phrog_4372 tail length tape measure protein tail 1 11894 16972
YP_009035835.1 NC_024208_p20 hypothetical protein phrog_7064 tail protein tail 1 20349 21545
YP_009035870.1 NC_024208_p55 hypothetical protein phrog_18754 unknown function unknown function 1 38156 38410
YP_009035890.1 NC_024208_p75 hypothetical protein phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 48119 48694
YP_009035855.1 NC_024208_p40 hypothetical protein phrog_21556 unknown function unknown function 1 29090 29206
YP_009035892.1 NC_024208_p77 hypothetical protein phrog_17479 unknown function unknown function 1 49509 49727
YP_009035878.1 NC_024208_p63 hypothetical protein phrog_3962 unknown function unknown function 1 41229 41747
YP_009035861.1 NC_024208_p46 hypothetical protein phrog_2152 unknown function unknown function 1 30541 31380
YP_009035856.1 NC_024208_p41 hypothetical protein phrog_10686 unknown function unknown function 1 29208 29468
YP_009035871.1 NC_024208_p56 hypothetical protein phrog_20651 unknown function unknown function 1 38410 39054
YP_009035824.1 NC_024208_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 3472 5202
YP_009035819.1 NC_024208_p4 hypothetical protein phrog_4259 unknown function unknown function 1 1298 1672
YP_009035862.1 NC_024208_p47 hypothetical protein singleton unknown function unknown function 1 31452 31571
YP_009035832.1 NC_024208_p17 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 11511 11894
YP_009035826.1 NC_024208_p11 hypothetical protein phrog_3270 head maturation protease head and packaging 1 6538 8784
YP_009035836.1 NC_024208_p21 hypothetical protein phrog_21087 unknown function unknown function 1 21548 21862
YP_009035837.1 NC_024208_p22 hypothetical protein phrog_21913 unknown function unknown function 1 21852 22976
YP_009035888.1 NC_024208_p73 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 47186 47482
YP_009035840.1 NC_024208_p25 hypothetical protein phrog_19023 unknown function unknown function 1 23750 24010
YP_009035831.1 NC_024208_p16 hypothetical protein phrog_4338 unknown function unknown function 1 10955 11536
YP_009035822.1 NC_024208_p7 hypothetical protein phrog_19428 unknown function unknown function 1 2431 2808
YP_009035867.1 NC_024208_p52 hypothetical protein phrog_21864 unknown function unknown function 1 33650 33835
YP_009035823.1 NC_024208_p8 hypothetical protein phrog_11022 unknown function unknown function 1 2818 3468
YP_009035881.1 NC_024208_p66 hypothetical protein phrog_21846 unknown function unknown function 1 42640 43704
YP_009035869.1 NC_024208_p54 hypothetical protein phrog_19543 unknown function unknown function 1 37896 38156
YP_009035845.1 NC_024208_p30 hypothetical protein phrog_18812 unknown function unknown function 1 25439 25813
YP_009035853.1 NC_024208_p38 hypothetical protein phrog_19725 unknown function unknown function 1 28277 28393
YP_009035859.1 NC_024208_p44 hypothetical protein singleton unknown function unknown function 1 29985 30290
YP_009035854.1 NC_024208_p39 hypothetical protein phrog_4079 unknown function unknown function 1 28393 29076
YP_009035829.1 NC_024208_p14 cell adhesion domain-containing protein phrog_2645 major tail protein tail 1 9484 10401
YP_009035868.1 NC_024208_p53 hypothetical protein phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 33849 37883
YP_009035850.1 NC_024208_p35 hypothetical protein phrog_20237 unknown function unknown function 1 27248 27583
YP_009035841.1 NC_024208_p26 hypothetical protein phrog_20653 unknown function unknown function 1 24057 24308
YP_009035849.1 NC_024208_p34 hypothetical protein phrog_9078 unknown function unknown function 1 26886 27248
YP_009035883.1 NC_024208_p68 hypothetical protein phrog_34038 unknown function unknown function 1 43862 44032
YP_009035834.1 NC_024208_p19 hypothetical protein phrog_21674 tail protein tail 1 16972 20349
YP_009035848.1 NC_024208_p33 hypothetical protein phrog_23609 unknown function unknown function 1 26583 26879
YP_009035877.1 NC_024208_p62 hypothetical protein phrog_18895 unknown function unknown function 1 41008 41232
YP_009035889.1 NC_024208_p74 hypothetical protein phrog_4997 unknown function unknown function 1 47746 48093
YP_009035842.1 NC_024208_p27 hypothetical protein phrog_19183 unknown function unknown function 1 24394 24621
YP_009035885.1 NC_024208_p70 hypothetical protein phrog_21395 unknown function unknown function 1 44600 45079
YP_009035820.1 NC_024208_p5 homing endonuclease phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1675 2070
YP_009035886.1 NC_024208_p71 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 45386 45964
YP_009035894.1 NC_024208_p79 hypothetical protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 50853 53819
YP_009035838.1 NC_024208_p23 hypothetical protein phrog_17080 unknown function unknown function 1 23063 23353
YP_009035825.1 NC_024208_p10 tail length tape-measure protein phrog_12 portal protein head and packaging 1 5202 6497
YP_009035828.1 NC_024208_p13 hypothetical protein phrog_78 tail terminator connector 1 9155 9469
YP_009035847.1 NC_024208_p32 hypothetical protein phrog_20825 unknown function unknown function 1 26235 26540
YP_009035858.1 NC_024208_p43 hypothetical protein phrog_19247 unknown function unknown function 1 29711 29992
YP_009035816.1 NC_024208_p1 hypothetical protein phrog_17502 unknown function unknown function 1 230 625
YP_009035846.1 NC_024208_p31 hypothetical protein phrog_19193 unknown function unknown function 1 25852 26184
YP_009035895.1 NC_024208_p80 hypothetical protein phrog_4303 unknown function unknown function 1 53824 54054
YP_009035818.1 NC_024208_p3 hypothetical protein phrog_6918 holin lysis 1 941 1273
YP_009035876.1 NC_024208_p61 hypothetical protein phrog_21840 unknown function unknown function 1 40520 41011
YP_009035817.1 NC_024208_p2 hypothetical protein phrog_17025 unknown function unknown function 1 628 939
YP_009035852.1 NC_024208_p37 hypothetical protein phrog_21519 unknown function unknown function 1 27824 28165
YP_009035893.1 NC_024208_p78 lysin phrog_1794 amidase lysis 1 49747 50835
YP_009035872.1 NC_024208_p57 hypothetical protein phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 39018 39263
YP_009035830.1 NC_024208_p15 hypothetical protein phrog_4282 unknown function unknown function 1 10439 10873
YP_009035882.1 NC_024208_p67 hypothetical protein phrog_20361 unknown function unknown function 1 43707 43865
YP_009035891.1 NC_024208_p76 hypothetical protein phrog_22968 unknown function unknown function 1 48705 49082
YP_009035821.1 NC_024208_p6 hypothetical protein phrog_4247 virion structural protein head and packaging 1 2085 2441
YP_009035875.1 NC_024208_p60 hypothetical protein phrog_10686 unknown function unknown function 1 40203 40517
YP_009035866.1 NC_024208_p51 hypothetical protein phrog_17887 unknown function unknown function 1 32497 33657
YP_009035863.1 NC_024208_p48 hypothetical protein singleton unknown function unknown function 1 31573 31725
YP_009035880.1 NC_024208_p65 hypothetical protein phrog_21029 unknown function unknown function 1 41981 42640
YP_009035864.1 NC_024208_p49 hypothetical protein phrog_20304 unknown function unknown function 1 31722 32270
YP_009035865.1 NC_024208_p50 hypothetical protein phrog_20041 unknown function unknown function 1 32267 32500
YP_009035839.1 NC_024208_p24 hypothetical protein phrog_19351 unknown function unknown function 1 23387 23641
YP_009035887.1 NC_024208_p72 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 45966 47189
YP_009035851.1 NC_024208_p36 hypothetical protein phrog_17482 unknown function unknown function 1 27564 27821
YP_009035844.1 NC_024208_p29 hypothetical protein phrog_21426 unknown function unknown function 1 25019 25390
YP_009035874.1 NC_024208_p59 hypothetical protein phrog_32709 unknown function unknown function 1 39658 40017
YP_009035879.1 NC_024208_p64 hypothetical protein phrog_14776 unknown function unknown function 1 41737 41991
YP_009035857.1 NC_024208_p42 hypothetical protein phrog_20861 unknown function unknown function 1 29470 29706
YP_009035827.1 NC_024208_p12 hypothetical protein phrog_4270 unknown function unknown function 1 8800 9162
YP_009035860.1 NC_024208_p45 hypothetical protein phrog_20422 unknown function unknown function 1 30287 30454