| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024208 |
Definition |
Lactococcus phage P118, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
54173 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
33.49 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009035873.1 | NC_024208_p58 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 39263 | 39610 |
| YP_009035843.1 | NC_024208_p28 | hypothetical protein | phrog_37342 | unknown function | unknown function | 1 | 24618 | 25010 |
| YP_009035884.1 | NC_024208_p69 | hypothetical protein | phrog_21453 | unknown function | unknown function | 1 | 44022 | 44603 |
| YP_009035833.1 | NC_024208_p18 | hypothetical protein | phrog_4372 | tail length tape measure protein | tail | 1 | 11894 | 16972 |
| YP_009035835.1 | NC_024208_p20 | hypothetical protein | phrog_7064 | tail protein | tail | 1 | 20349 | 21545 |
| YP_009035870.1 | NC_024208_p55 | hypothetical protein | phrog_18754 | unknown function | unknown function | 1 | 38156 | 38410 |
| YP_009035890.1 | NC_024208_p75 | hypothetical protein | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 48119 | 48694 |
| YP_009035855.1 | NC_024208_p40 | hypothetical protein | phrog_21556 | unknown function | unknown function | 1 | 29090 | 29206 |
| YP_009035892.1 | NC_024208_p77 | hypothetical protein | phrog_17479 | unknown function | unknown function | 1 | 49509 | 49727 |
| YP_009035878.1 | NC_024208_p63 | hypothetical protein | phrog_3962 | unknown function | unknown function | 1 | 41229 | 41747 |
| YP_009035861.1 | NC_024208_p46 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 30541 | 31380 |
| YP_009035856.1 | NC_024208_p41 | hypothetical protein | phrog_10686 | unknown function | unknown function | 1 | 29208 | 29468 |
| YP_009035871.1 | NC_024208_p56 | hypothetical protein | phrog_20651 | unknown function | unknown function | 1 | 38410 | 39054 |
| YP_009035824.1 | NC_024208_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 3472 | 5202 |
| YP_009035819.1 | NC_024208_p4 | hypothetical protein | phrog_4259 | unknown function | unknown function | 1 | 1298 | 1672 |
| YP_009035862.1 | NC_024208_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31452 | 31571 |
| YP_009035832.1 | NC_024208_p17 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 11511 | 11894 |
| YP_009035826.1 | NC_024208_p11 | hypothetical protein | phrog_3270 | head maturation protease | head and packaging | 1 | 6538 | 8784 |
| YP_009035836.1 | NC_024208_p21 | hypothetical protein | phrog_21087 | unknown function | unknown function | 1 | 21548 | 21862 |
| YP_009035837.1 | NC_024208_p22 | hypothetical protein | phrog_21913 | unknown function | unknown function | 1 | 21852 | 22976 |
| YP_009035888.1 | NC_024208_p73 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47186 | 47482 |
| YP_009035840.1 | NC_024208_p25 | hypothetical protein | phrog_19023 | unknown function | unknown function | 1 | 23750 | 24010 |
| YP_009035831.1 | NC_024208_p16 | hypothetical protein | phrog_4338 | unknown function | unknown function | 1 | 10955 | 11536 |
| YP_009035822.1 | NC_024208_p7 | hypothetical protein | phrog_19428 | unknown function | unknown function | 1 | 2431 | 2808 |
| YP_009035867.1 | NC_024208_p52 | hypothetical protein | phrog_21864 | unknown function | unknown function | 1 | 33650 | 33835 |
| YP_009035823.1 | NC_024208_p8 | hypothetical protein | phrog_11022 | unknown function | unknown function | 1 | 2818 | 3468 |
| YP_009035881.1 | NC_024208_p66 | hypothetical protein | phrog_21846 | unknown function | unknown function | 1 | 42640 | 43704 |
| YP_009035869.1 | NC_024208_p54 | hypothetical protein | phrog_19543 | unknown function | unknown function | 1 | 37896 | 38156 |
| YP_009035845.1 | NC_024208_p30 | hypothetical protein | phrog_18812 | unknown function | unknown function | 1 | 25439 | 25813 |
| YP_009035853.1 | NC_024208_p38 | hypothetical protein | phrog_19725 | unknown function | unknown function | 1 | 28277 | 28393 |
| YP_009035859.1 | NC_024208_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29985 | 30290 |
| YP_009035854.1 | NC_024208_p39 | hypothetical protein | phrog_4079 | unknown function | unknown function | 1 | 28393 | 29076 |
| YP_009035829.1 | NC_024208_p14 | cell adhesion domain-containing protein | phrog_2645 | major tail protein | tail | 1 | 9484 | 10401 |
| YP_009035868.1 | NC_024208_p53 | hypothetical protein | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 33849 | 37883 |
| YP_009035850.1 | NC_024208_p35 | hypothetical protein | phrog_20237 | unknown function | unknown function | 1 | 27248 | 27583 |
| YP_009035841.1 | NC_024208_p26 | hypothetical protein | phrog_20653 | unknown function | unknown function | 1 | 24057 | 24308 |
| YP_009035849.1 | NC_024208_p34 | hypothetical protein | phrog_9078 | unknown function | unknown function | 1 | 26886 | 27248 |
| YP_009035883.1 | NC_024208_p68 | hypothetical protein | phrog_34038 | unknown function | unknown function | 1 | 43862 | 44032 |
| YP_009035834.1 | NC_024208_p19 | hypothetical protein | phrog_21674 | tail protein | tail | 1 | 16972 | 20349 |
| YP_009035848.1 | NC_024208_p33 | hypothetical protein | phrog_23609 | unknown function | unknown function | 1 | 26583 | 26879 |
| YP_009035877.1 | NC_024208_p62 | hypothetical protein | phrog_18895 | unknown function | unknown function | 1 | 41008 | 41232 |
| YP_009035889.1 | NC_024208_p74 | hypothetical protein | phrog_4997 | unknown function | unknown function | 1 | 47746 | 48093 |
| YP_009035842.1 | NC_024208_p27 | hypothetical protein | phrog_19183 | unknown function | unknown function | 1 | 24394 | 24621 |
| YP_009035885.1 | NC_024208_p70 | hypothetical protein | phrog_21395 | unknown function | unknown function | 1 | 44600 | 45079 |
| YP_009035820.1 | NC_024208_p5 | homing endonuclease | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1675 | 2070 |
| YP_009035886.1 | NC_024208_p71 | hypothetical protein | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45386 | 45964 |
| YP_009035894.1 | NC_024208_p79 | hypothetical protein | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 50853 | 53819 |
| YP_009035838.1 | NC_024208_p23 | hypothetical protein | phrog_17080 | unknown function | unknown function | 1 | 23063 | 23353 |
| YP_009035825.1 | NC_024208_p10 | tail length tape-measure protein | phrog_12 | portal protein | head and packaging | 1 | 5202 | 6497 |
| YP_009035828.1 | NC_024208_p13 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 9155 | 9469 |
| YP_009035847.1 | NC_024208_p32 | hypothetical protein | phrog_20825 | unknown function | unknown function | 1 | 26235 | 26540 |
| YP_009035858.1 | NC_024208_p43 | hypothetical protein | phrog_19247 | unknown function | unknown function | 1 | 29711 | 29992 |
| YP_009035816.1 | NC_024208_p1 | hypothetical protein | phrog_17502 | unknown function | unknown function | 1 | 230 | 625 |
| YP_009035846.1 | NC_024208_p31 | hypothetical protein | phrog_19193 | unknown function | unknown function | 1 | 25852 | 26184 |
| YP_009035895.1 | NC_024208_p80 | hypothetical protein | phrog_4303 | unknown function | unknown function | 1 | 53824 | 54054 |
| YP_009035818.1 | NC_024208_p3 | hypothetical protein | phrog_6918 | holin | lysis | 1 | 941 | 1273 |
| YP_009035876.1 | NC_024208_p61 | hypothetical protein | phrog_21840 | unknown function | unknown function | 1 | 40520 | 41011 |
| YP_009035817.1 | NC_024208_p2 | hypothetical protein | phrog_17025 | unknown function | unknown function | 1 | 628 | 939 |
| YP_009035852.1 | NC_024208_p37 | hypothetical protein | phrog_21519 | unknown function | unknown function | 1 | 27824 | 28165 |
| YP_009035893.1 | NC_024208_p78 | lysin | phrog_1794 | amidase | lysis | 1 | 49747 | 50835 |
| YP_009035872.1 | NC_024208_p57 | hypothetical protein | phrog_3855 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39018 | 39263 |
| YP_009035830.1 | NC_024208_p15 | hypothetical protein | phrog_4282 | unknown function | unknown function | 1 | 10439 | 10873 |
| YP_009035882.1 | NC_024208_p67 | hypothetical protein | phrog_20361 | unknown function | unknown function | 1 | 43707 | 43865 |
| YP_009035891.1 | NC_024208_p76 | hypothetical protein | phrog_22968 | unknown function | unknown function | 1 | 48705 | 49082 |
| YP_009035821.1 | NC_024208_p6 | hypothetical protein | phrog_4247 | virion structural protein | head and packaging | 1 | 2085 | 2441 |
| YP_009035875.1 | NC_024208_p60 | hypothetical protein | phrog_10686 | unknown function | unknown function | 1 | 40203 | 40517 |
| YP_009035866.1 | NC_024208_p51 | hypothetical protein | phrog_17887 | unknown function | unknown function | 1 | 32497 | 33657 |
| YP_009035863.1 | NC_024208_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31573 | 31725 |
| YP_009035880.1 | NC_024208_p65 | hypothetical protein | phrog_21029 | unknown function | unknown function | 1 | 41981 | 42640 |
| YP_009035864.1 | NC_024208_p49 | hypothetical protein | phrog_20304 | unknown function | unknown function | 1 | 31722 | 32270 |
| YP_009035865.1 | NC_024208_p50 | hypothetical protein | phrog_20041 | unknown function | unknown function | 1 | 32267 | 32500 |
| YP_009035839.1 | NC_024208_p24 | hypothetical protein | phrog_19351 | unknown function | unknown function | 1 | 23387 | 23641 |
| YP_009035887.1 | NC_024208_p72 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 45966 | 47189 |
| YP_009035851.1 | NC_024208_p36 | hypothetical protein | phrog_17482 | unknown function | unknown function | 1 | 27564 | 27821 |
| YP_009035844.1 | NC_024208_p29 | hypothetical protein | phrog_21426 | unknown function | unknown function | 1 | 25019 | 25390 |
| YP_009035874.1 | NC_024208_p59 | hypothetical protein | phrog_32709 | unknown function | unknown function | 1 | 39658 | 40017 |
| YP_009035879.1 | NC_024208_p64 | hypothetical protein | phrog_14776 | unknown function | unknown function | 1 | 41737 | 41991 |
| YP_009035857.1 | NC_024208_p42 | hypothetical protein | phrog_20861 | unknown function | unknown function | 1 | 29470 | 29706 |
| YP_009035827.1 | NC_024208_p12 | hypothetical protein | phrog_4270 | unknown function | unknown function | 1 | 8800 | 9162 |
| YP_009035860.1 | NC_024208_p45 | hypothetical protein | phrog_20422 | unknown function | unknown function | 1 | 30287 | 30454 |