Genomic map of Escherichia phage e4/1c (NC_024210)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024210
Definition
Escherichia phage e4/1c, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus.
DB of origin
REFSEQ
Length
47112
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
72
%GC
44.07
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009036056.1 NC_024210_p57 hypothetical protein phrog_11986 unknown function unknown function -1 41342 41524
YP_009036002.1 NC_024210_p3 endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2203 2550
YP_009036062.1 NC_024210_p63 hypothetical protein phrog_4841 unknown function unknown function 1 43614 44156
YP_009036041.1 NC_024210_p42 hypothetical protein phrog_2676 unknown function unknown function 1 34684 34911
YP_009036067.1 NC_024210_p68 hypothetical protein phrog_1312 unknown function unknown function 1 45676 45804
YP_009036005.1 NC_024210_p6 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 3996 4739
YP_009036045.1 NC_024210_p46 hypothetical protein phrog_4596 unknown function unknown function 1 35541 35798
YP_009036026.1 NC_024210_p27 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 22020 22982
YP_009036013.1 NC_024210_p14 hypothetical protein phrog_302 virion structural protein head and packaging 1 9992 10393
YP_009036039.1 NC_024210_p40 hypothetical protein phrog_824 unknown function unknown function 1 34045 34434
YP_009036037.1 NC_024210_p38 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation -1 31535 32008
YP_009036003.1 NC_024210_p4 HNH endonuclease singleton unknown function unknown function 1 2478 2720
YP_009036023.1 NC_024210_p24 hypothetical protein phrog_30 minor tail protein tail 1 17169 17975
YP_009036061.1 NC_024210_p62 hypothetical protein phrog_5684 unknown function unknown function -1 42686 42916
YP_009036010.1 NC_024210_p11 tail fiber protein phrog_5073 tail fiber protein tail 1 7065 8582
YP_009036044.1 NC_024210_p45 hypothetical protein phrog_2817 unknown function unknown function 1 35305 35544
YP_009036051.1 NC_024210_p52 phage-related lysozyme phrog_7 endolysin lysis 1 38235 38717
YP_009036043.1 NC_024210_p44 hypothetical protein phrog_2180 unknown function unknown function 1 35183 35308
YP_009036033.1 NC_024210_p34 endonuclease protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 26791 27294
YP_009036046.1 NC_024210_p47 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 35827 37077
YP_009036063.1 NC_024210_p64 hypothetical protein phrog_7327 unknown function unknown function 1 44156 44704
YP_009036029.1 NC_024210_p30 hypothetical protein singleton unknown function unknown function 1 24240 24806
YP_009036036.1 NC_024210_p37 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 30556 31482
YP_009036006.1 NC_024210_p7 hypothetical protein phrog_530 head maturation protease head and packaging 1 4729 5838
YP_009036021.1 NC_024210_p22 minor tail protein phrog_14 minor tail protein tail 1 16057 16407
YP_009036066.1 NC_024210_p67 hypothetical protein phrog_2452 unknown function unknown function 1 45283 45603
YP_009036048.1 NC_024210_p49 hypothetical protein phrog_10052 unknown function unknown function 1 37530 37718
YP_009036060.1 NC_024210_p61 hypothetical protein phrog_4448 unknown function unknown function -1 42450 42689
YP_009036040.1 NC_024210_p41 hypothetical protein phrog_6031 unknown function unknown function 1 34493 34687
YP_009036034.1 NC_024210_p35 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 27296 27718
YP_009036022.1 NC_024210_p23 hypothetical protein phrog_18 minor tail protein tail 1 16409 17218
YP_009036009.1 NC_024210_p10 hypothetical protein singleton unknown function unknown function 1 6594 6983
YP_009036028.1 NC_024210_p29 hypothetical protein singleton unknown function unknown function 1 23864 24235
YP_009036012.1 NC_024210_p13 hypothetical protein phrog_2716 unknown function unknown function 1 9703 9948
YP_009036053.1 NC_024210_p54 YdbL phrog_2794 unknown function unknown function -1 39117 39452
YP_009036050.1 NC_024210_p51 holin phrog_2877 holin lysis 1 38020 38235
YP_009036052.1 NC_024210_p53 hypothetical protein phrog_1804 Rz-like spanin lysis 1 38699 39103
YP_009036065.1 NC_024210_p66 hypothetical protein phrog_25960 unknown function unknown function 1 45128 45283
YP_009036047.1 NC_024210_p48 hypothetical protein phrog_7411 unknown function unknown function 1 37300 37530
YP_009036027.1 NC_024210_p28 hypothetical protein phrog_4281 unknown function unknown function -1 22982 23302
YP_009036019.1 NC_024210_p20 hypothetical protein phrog_680 tail length tape measure protein tail 1 12683 12937
YP_009036025.1 NC_024210_p26 tail fiber protein phrog_31 central tail fiber J tail 1 18573 21989
YP_009036004.1 NC_024210_p5 truncated portal protein phrog_146 portal protein head and packaging 1 2764 3930
YP_009036064.1 NC_024210_p65 hypothetical protein phrog_8335 unknown function unknown function 1 44776 45009
YP_009036032.1 NC_024210_p33 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 26102 26749
YP_009036058.1 NC_024210_p59 hypothetical protein phrog_12926 unknown function unknown function -1 41920 42222
YP_009036020.1 NC_024210_p21 tail length tape measure protein precursor phrog_24 tail length tape measure protein tail 1 12945 16025
YP_009036008.1 NC_024210_p9 hypothetical protein singleton unknown function unknown function 1 6402 6560
YP_009036014.1 NC_024210_p15 hypothetical protein phrog_161 head closure Hc1 connector 1 10381 10761
YP_009036011.1 NC_024210_p12 hypothetical protein phrog_264 major head protein head and packaging 1 8663 9610
YP_009036018.1 NC_024210_p19 hypothetical protein phrog_569 tail length tape measure protein tail 1 12306 12620
YP_009036042.1 NC_024210_p43 hypothetical protein phrog_3249 unknown function unknown function 1 34908 35108
YP_009036035.1 NC_024210_p36 tail fiber protein phrog_4818 tail fiber protein tail -1 27751 30498
YP_009036069.1 NC_024210_p70 hypothetical protein phrog_303 unknown function unknown function 1 46034 46273
YP_009036068.1 NC_024210_p69 hypothetical protein phrog_3955 unknown function unknown function 1 45801 46031
YP_009036000.1 NC_024210_p1 terminase small subunit phrog_606 terminase small subunit head and packaging 1 3 539
YP_009036001.1 NC_024210_p2 terminase large subunit phrog_38 terminase large subunit head and packaging 1 634 2178
YP_009036071.1 NC_024210_p72 hypothetical protein phrog_2919 unknown function unknown function 1 46828 47013
YP_009036007.1 NC_024210_p8 hypothetical protein phrog_1989 unknown function unknown function 1 5850 6374
YP_009036057.1 NC_024210_p58 hypothetical protein phrog_2684 unknown function unknown function -1 41541 41894
YP_009036038.1 NC_024210_p39 hypothetical protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 32102 34045
YP_009036017.1 NC_024210_p18 hypothetical protein phrog_584 major tail protein tail 1 11582 12232
YP_009036055.1 NC_024210_p56 hypothetical protein phrog_8121 unknown function unknown function -1 41080 41259
YP_009036030.1 NC_024210_p31 hypothetical protein phrog_5247 unknown function unknown function 1 24880 25074
YP_009036031.1 NC_024210_p32 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 25078 26046
YP_009036016.1 NC_024210_p17 hypothetical protein phrog_179 tail terminator connector 1 11169 11567
YP_009036059.1 NC_024210_p60 hypothetical protein phrog_4548 unknown function unknown function -1 42297 42449
YP_009036049.1 NC_024210_p50 hypothetical protein phrog_4788 unknown function unknown function 1 37731 37904
YP_009036024.1 NC_024210_p25 tail assembly protein I phrog_32 tail assembly protein tail 1 17947 18522
YP_009036070.1 NC_024210_p71 hypothetical protein phrog_10885 unknown function unknown function 1 46251 46460
YP_009036015.1 NC_024210_p16 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 10751 11179
YP_009036054.1 NC_024210_p55 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 39457 41046