Genomic map of Lactococcus phage P162 (NC_024214)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024214
Definition
Lactococcus phage P162, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
55584
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
33.33
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009036748.1 NC_024214_p5 protein of an unannotated phage phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1675 2070
YP_009036777.1 NC_024214_p34 protein of an unannotated phage phrog_9516 replication initiation protein DNA, RNA and nucleotide metabolism 1 26799 27257
YP_009036822.1 NC_024214_p79 protein of an unannotated phage phrog_17479 unknown function unknown function 1 50848 51144
YP_009036798.1 NC_024214_p55 protein of an unannotated phage phrog_19543 unknown function unknown function 1 38698 38958
YP_009036815.1 NC_024214_p72 protein of an unannotated phage phrog_21395 unknown function unknown function 1 46012 46491
YP_009036746.1 NC_024214_p3 protein of an unannotated phage phrog_6918 holin lysis 1 941 1273
YP_009036762.1 NC_024214_p19 protein of an unannotated phage phrog_21674 tail protein tail 1 16966 20346
YP_009036820.1 NC_024214_p77 protein of an unannotated phage phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 49524 50099
YP_009036754.1 NC_024214_p11 protein of an unannotated phage phrog_3270 head maturation protease head and packaging 1 6531 8777
YP_009036796.1 NC_024214_p53 protein of an unannotated phage phrog_21864 unknown function unknown function 1 34452 34637
YP_009036775.1 NC_024214_p32 protein of an unannotated phage singleton unknown function unknown function 1 26168 26326
YP_009036813.1 NC_024214_p70 protein of an unannotated phage phrog_37996 unknown function unknown function 1 44866 45444
YP_009036823.1 NC_024214_p80 protein of an unannotated phage phrog_1794 amidase lysis 1 51163 52245
YP_009036770.1 NC_024214_p27 protein of an unannotated phage phrog_20653 unknown function unknown function 1 24397 24648
YP_009036801.1 NC_024214_p58 protein of an unannotated phage phrog_3855 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 39820 40065
YP_009036776.1 NC_024214_p33 protein of an unannotated phage phrog_18812 unknown function unknown function 1 26384 26758
YP_009036785.1 NC_024214_p42 protein of an unannotated phage phrog_4079 unknown function unknown function 1 29525 30196
YP_009036756.1 NC_024214_p13 protein of an unannotated phage phrog_78 tail terminator connector 1 9148 9462
YP_009036824.1 NC_024214_p81 protein of an unannotated phage phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 52263 55229
YP_009036792.1 NC_024214_p49 protein of an unannotated phage singleton unknown function unknown function 1 32370 32504
YP_009036794.1 NC_024214_p51 protein of an unannotated phage phrog_20041 unknown function unknown function 1 33039 33272
YP_009036807.1 NC_024214_p64 protein of an unannotated phage singleton unknown function unknown function 1 42009 42254
YP_009036791.1 NC_024214_p48 protein of an unannotated phage phrog_2152 unknown function unknown function 1 31460 32299
YP_009036778.1 NC_024214_p35 protein of an unannotated phage phrog_19193 unknown function unknown function 1 27247 27579
YP_009036771.1 NC_024214_p28 protein of an unannotated phage phrog_19183 unknown function unknown function 1 24685 24963
YP_009036752.1 NC_024214_p9 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 3463 5193
YP_009036816.1 NC_024214_p73 protein of an unannotated phage phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 46792 47370
YP_009036749.1 NC_024214_p6 protein of an unannotated phage phrog_4247 virion structural protein head and packaging 1 2085 2441
YP_009036797.1 NC_024214_p54 protein of an unannotated phage phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 34651 38685
YP_009036768.1 NC_024214_p25 protein of an unannotated phage singleton unknown function unknown function 1 23685 23951
YP_009036809.1 NC_024214_p66 protein of an unannotated phage phrog_14776 unknown function unknown function 1 42759 43013
YP_009036761.1 NC_024214_p18 protein of an unannotated phage phrog_4372 tail length tape measure protein tail 1 11888 16966
YP_009036766.1 NC_024214_p23 protein of an unannotated phage phrog_17080 unknown function unknown function 1 23057 23347
YP_009036784.1 NC_024214_p41 protein of an unannotated phage phrog_19725 unknown function unknown function 1 29409 29525
YP_009036818.1 NC_024214_p75 protein of an unannotated phage phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 48592 48888
YP_009036767.1 NC_024214_p24 protein of an unannotated phage phrog_19351 unknown function unknown function 1 23383 23637
YP_009036808.1 NC_024214_p65 protein of an unannotated phage phrog_3962 unknown function unknown function 1 42251 42769
YP_009036787.1 NC_024214_p44 protein of an unannotated phage phrog_10686 unknown function unknown function 1 30328 30588
YP_009036783.1 NC_024214_p40 protein of an unannotated phage phrog_21519 unknown function unknown function 1 28916 29257
YP_009036772.1 NC_024214_p29 protein of an unannotated phage phrog_37342 unknown function unknown function 1 24960 25352
YP_009036765.1 NC_024214_p22 protein of an unannotated phage phrog_21913 unknown function unknown function 1 21849 22973
YP_009036819.1 NC_024214_p76 protein of an unannotated phage phrog_4997 unknown function unknown function 1 49163 49498
YP_009036793.1 NC_024214_p50 protein of an unannotated phage phrog_20304 unknown function unknown function 1 32494 33042
YP_009036814.1 NC_024214_p71 protein of an unannotated phage phrog_21453 unknown function unknown function 1 45434 46015
YP_009036804.1 NC_024214_p61 protein of an unannotated phage phrog_10686 unknown function unknown function 1 41008 41322
YP_009036773.1 NC_024214_p30 protein of an unannotated phage phrog_21426 unknown function unknown function 1 25362 25733
YP_009036781.1 NC_024214_p38 protein of an unannotated phage phrog_20237 unknown function unknown function 1 28340 28675
YP_009036810.1 NC_024214_p67 protein of an unannotated phage phrog_21029 unknown function unknown function 1 43003 43644
YP_009036790.1 NC_024214_p47 protein of an unannotated phage phrog_20422 unknown function unknown function 1 31206 31373
YP_009036751.1 NC_024214_p8 protein of an unannotated phage phrog_11022 unknown function unknown function 1 2818 3459
YP_009036821.1 NC_024214_p78 protein of an unannotated phage phrog_22968 unknown function unknown function 1 50110 50487
YP_009036744.1 NC_024214_p1 protein of an unannotated phage phrog_17502 unknown function unknown function 1 230 625
YP_009036745.1 NC_024214_p2 protein of an unannotated phage phrog_17025 unknown function unknown function 1 628 939
YP_009036812.1 NC_024214_p69 protein of an unannotated phage phrog_20361 unknown function unknown function 1 44711 44878
YP_009036825.1 NC_024214_p82 protein of an unannotated phage phrog_4303 unknown function unknown function 1 55234 55464
YP_009036802.1 NC_024214_p59 protein of an unannotated phage phrog_301 secreted protein other 1 40065 40412
YP_009036755.1 NC_024214_p12 protein of an unannotated phage phrog_4270 unknown function unknown function 1 8793 9155
YP_009036806.1 NC_024214_p63 protein of an unannotated phage phrog_18895 unknown function unknown function 1 41813 42022
YP_009036779.1 NC_024214_p36 protein of an unannotated phage phrog_20825 unknown function unknown function 1 27630 27935
YP_009036780.1 NC_024214_p37 protein of an unannotated phage phrog_9078 unknown function unknown function 1 27978 28340
YP_009036774.1 NC_024214_p31 protein of an unannotated phage phrog_32709 unknown function unknown function 1 25780 26106
YP_009036817.1 NC_024214_p74 protein of an unannotated phage phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 47372 48595
YP_009036763.1 NC_024214_p20 protein of an unannotated phage phrog_7064 tail protein tail 1 20346 21542
YP_009036782.1 NC_024214_p39 protein of an unannotated phage phrog_17482 unknown function unknown function 1 28656 28913
YP_009036759.1 NC_024214_p16 protein of an unannotated phage phrog_4338 unknown function unknown function 1 10949 11530
YP_009036795.1 NC_024214_p52 protein of an unannotated phage phrog_17887 unknown function unknown function 1 33269 34459
YP_009036747.1 NC_024214_p4 protein of an unannotated phage phrog_4259 unknown function unknown function 1 1298 1672
YP_009036805.1 NC_024214_p62 protein of an unannotated phage phrog_21840 unknown function unknown function 1 41325 41816
YP_009036789.1 NC_024214_p46 protein of an unannotated phage phrog_19247 unknown function unknown function 1 30831 31115
YP_009036769.1 NC_024214_p26 protein of an unannotated phage phrog_19023 unknown function unknown function 1 23980 24240
YP_009036760.1 NC_024214_p17 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 11505 11888
YP_009036799.1 NC_024214_p56 protein of an unannotated phage phrog_18754 unknown function unknown function 1 38958 39212
YP_009036750.1 NC_024214_p7 protein of an unannotated phage phrog_19428 unknown function unknown function 1 2431 2808
YP_009036800.1 NC_024214_p57 protein of an unannotated phage phrog_20651 unknown function unknown function 1 39212 39856
YP_009036788.1 NC_024214_p45 protein of an unannotated phage phrog_20861 unknown function unknown function 1 30590 30826
YP_009036757.1 NC_024214_p14 protein of an unannotated phage phrog_2645 major tail protein tail 1 9477 10394
YP_009036786.1 NC_024214_p43 protein of an unannotated phage phrog_21556 unknown function unknown function 1 30210 30326
YP_009036803.1 NC_024214_p60 protein of an unannotated phage phrog_35542 unknown function unknown function 1 40460 40621
YP_009036764.1 NC_024214_p21 protein of an unannotated phage phrog_21087 unknown function unknown function 1 21545 21859
YP_009036758.1 NC_024214_p15 protein of an unannotated phage phrog_4282 unknown function unknown function 1 10432 10866
YP_009036811.1 NC_024214_p68 protein of an unannotated phage phrog_21846 unknown function unknown function 1 43644 44708
YP_009036753.1 NC_024214_p10 protein of an unannotated phage phrog_12 portal protein head and packaging 1 5193 6488