| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024214 |
Definition |
Lactococcus phage P162, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
55584 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
82 |
%GC |
33.33 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009036748.1 | NC_024214_p5 | protein of an unannotated phage | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1675 | 2070 |
| YP_009036777.1 | NC_024214_p34 | protein of an unannotated phage | phrog_9516 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 26799 | 27257 |
| YP_009036822.1 | NC_024214_p79 | protein of an unannotated phage | phrog_17479 | unknown function | unknown function | 1 | 50848 | 51144 |
| YP_009036798.1 | NC_024214_p55 | protein of an unannotated phage | phrog_19543 | unknown function | unknown function | 1 | 38698 | 38958 |
| YP_009036815.1 | NC_024214_p72 | protein of an unannotated phage | phrog_21395 | unknown function | unknown function | 1 | 46012 | 46491 |
| YP_009036746.1 | NC_024214_p3 | protein of an unannotated phage | phrog_6918 | holin | lysis | 1 | 941 | 1273 |
| YP_009036762.1 | NC_024214_p19 | protein of an unannotated phage | phrog_21674 | tail protein | tail | 1 | 16966 | 20346 |
| YP_009036820.1 | NC_024214_p77 | protein of an unannotated phage | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 49524 | 50099 |
| YP_009036754.1 | NC_024214_p11 | protein of an unannotated phage | phrog_3270 | head maturation protease | head and packaging | 1 | 6531 | 8777 |
| YP_009036796.1 | NC_024214_p53 | protein of an unannotated phage | phrog_21864 | unknown function | unknown function | 1 | 34452 | 34637 |
| YP_009036775.1 | NC_024214_p32 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 26168 | 26326 |
| YP_009036813.1 | NC_024214_p70 | protein of an unannotated phage | phrog_37996 | unknown function | unknown function | 1 | 44866 | 45444 |
| YP_009036823.1 | NC_024214_p80 | protein of an unannotated phage | phrog_1794 | amidase | lysis | 1 | 51163 | 52245 |
| YP_009036770.1 | NC_024214_p27 | protein of an unannotated phage | phrog_20653 | unknown function | unknown function | 1 | 24397 | 24648 |
| YP_009036801.1 | NC_024214_p58 | protein of an unannotated phage | phrog_3855 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39820 | 40065 |
| YP_009036776.1 | NC_024214_p33 | protein of an unannotated phage | phrog_18812 | unknown function | unknown function | 1 | 26384 | 26758 |
| YP_009036785.1 | NC_024214_p42 | protein of an unannotated phage | phrog_4079 | unknown function | unknown function | 1 | 29525 | 30196 |
| YP_009036756.1 | NC_024214_p13 | protein of an unannotated phage | phrog_78 | tail terminator | connector | 1 | 9148 | 9462 |
| YP_009036824.1 | NC_024214_p81 | protein of an unannotated phage | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 52263 | 55229 |
| YP_009036792.1 | NC_024214_p49 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 32370 | 32504 |
| YP_009036794.1 | NC_024214_p51 | protein of an unannotated phage | phrog_20041 | unknown function | unknown function | 1 | 33039 | 33272 |
| YP_009036807.1 | NC_024214_p64 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 42009 | 42254 |
| YP_009036791.1 | NC_024214_p48 | protein of an unannotated phage | phrog_2152 | unknown function | unknown function | 1 | 31460 | 32299 |
| YP_009036778.1 | NC_024214_p35 | protein of an unannotated phage | phrog_19193 | unknown function | unknown function | 1 | 27247 | 27579 |
| YP_009036771.1 | NC_024214_p28 | protein of an unannotated phage | phrog_19183 | unknown function | unknown function | 1 | 24685 | 24963 |
| YP_009036752.1 | NC_024214_p9 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 3463 | 5193 |
| YP_009036816.1 | NC_024214_p73 | protein of an unannotated phage | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 46792 | 47370 |
| YP_009036749.1 | NC_024214_p6 | protein of an unannotated phage | phrog_4247 | virion structural protein | head and packaging | 1 | 2085 | 2441 |
| YP_009036797.1 | NC_024214_p54 | protein of an unannotated phage | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 34651 | 38685 |
| YP_009036768.1 | NC_024214_p25 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 23685 | 23951 |
| YP_009036809.1 | NC_024214_p66 | protein of an unannotated phage | phrog_14776 | unknown function | unknown function | 1 | 42759 | 43013 |
| YP_009036761.1 | NC_024214_p18 | protein of an unannotated phage | phrog_4372 | tail length tape measure protein | tail | 1 | 11888 | 16966 |
| YP_009036766.1 | NC_024214_p23 | protein of an unannotated phage | phrog_17080 | unknown function | unknown function | 1 | 23057 | 23347 |
| YP_009036784.1 | NC_024214_p41 | protein of an unannotated phage | phrog_19725 | unknown function | unknown function | 1 | 29409 | 29525 |
| YP_009036818.1 | NC_024214_p75 | protein of an unannotated phage | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48592 | 48888 |
| YP_009036767.1 | NC_024214_p24 | protein of an unannotated phage | phrog_19351 | unknown function | unknown function | 1 | 23383 | 23637 |
| YP_009036808.1 | NC_024214_p65 | protein of an unannotated phage | phrog_3962 | unknown function | unknown function | 1 | 42251 | 42769 |
| YP_009036787.1 | NC_024214_p44 | protein of an unannotated phage | phrog_10686 | unknown function | unknown function | 1 | 30328 | 30588 |
| YP_009036783.1 | NC_024214_p40 | protein of an unannotated phage | phrog_21519 | unknown function | unknown function | 1 | 28916 | 29257 |
| YP_009036772.1 | NC_024214_p29 | protein of an unannotated phage | phrog_37342 | unknown function | unknown function | 1 | 24960 | 25352 |
| YP_009036765.1 | NC_024214_p22 | protein of an unannotated phage | phrog_21913 | unknown function | unknown function | 1 | 21849 | 22973 |
| YP_009036819.1 | NC_024214_p76 | protein of an unannotated phage | phrog_4997 | unknown function | unknown function | 1 | 49163 | 49498 |
| YP_009036793.1 | NC_024214_p50 | protein of an unannotated phage | phrog_20304 | unknown function | unknown function | 1 | 32494 | 33042 |
| YP_009036814.1 | NC_024214_p71 | protein of an unannotated phage | phrog_21453 | unknown function | unknown function | 1 | 45434 | 46015 |
| YP_009036804.1 | NC_024214_p61 | protein of an unannotated phage | phrog_10686 | unknown function | unknown function | 1 | 41008 | 41322 |
| YP_009036773.1 | NC_024214_p30 | protein of an unannotated phage | phrog_21426 | unknown function | unknown function | 1 | 25362 | 25733 |
| YP_009036781.1 | NC_024214_p38 | protein of an unannotated phage | phrog_20237 | unknown function | unknown function | 1 | 28340 | 28675 |
| YP_009036810.1 | NC_024214_p67 | protein of an unannotated phage | phrog_21029 | unknown function | unknown function | 1 | 43003 | 43644 |
| YP_009036790.1 | NC_024214_p47 | protein of an unannotated phage | phrog_20422 | unknown function | unknown function | 1 | 31206 | 31373 |
| YP_009036751.1 | NC_024214_p8 | protein of an unannotated phage | phrog_11022 | unknown function | unknown function | 1 | 2818 | 3459 |
| YP_009036821.1 | NC_024214_p78 | protein of an unannotated phage | phrog_22968 | unknown function | unknown function | 1 | 50110 | 50487 |
| YP_009036744.1 | NC_024214_p1 | protein of an unannotated phage | phrog_17502 | unknown function | unknown function | 1 | 230 | 625 |
| YP_009036745.1 | NC_024214_p2 | protein of an unannotated phage | phrog_17025 | unknown function | unknown function | 1 | 628 | 939 |
| YP_009036812.1 | NC_024214_p69 | protein of an unannotated phage | phrog_20361 | unknown function | unknown function | 1 | 44711 | 44878 |
| YP_009036825.1 | NC_024214_p82 | protein of an unannotated phage | phrog_4303 | unknown function | unknown function | 1 | 55234 | 55464 |
| YP_009036802.1 | NC_024214_p59 | protein of an unannotated phage | phrog_301 | secreted protein | other | 1 | 40065 | 40412 |
| YP_009036755.1 | NC_024214_p12 | protein of an unannotated phage | phrog_4270 | unknown function | unknown function | 1 | 8793 | 9155 |
| YP_009036806.1 | NC_024214_p63 | protein of an unannotated phage | phrog_18895 | unknown function | unknown function | 1 | 41813 | 42022 |
| YP_009036779.1 | NC_024214_p36 | protein of an unannotated phage | phrog_20825 | unknown function | unknown function | 1 | 27630 | 27935 |
| YP_009036780.1 | NC_024214_p37 | protein of an unannotated phage | phrog_9078 | unknown function | unknown function | 1 | 27978 | 28340 |
| YP_009036774.1 | NC_024214_p31 | protein of an unannotated phage | phrog_32709 | unknown function | unknown function | 1 | 25780 | 26106 |
| YP_009036817.1 | NC_024214_p74 | protein of an unannotated phage | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 47372 | 48595 |
| YP_009036763.1 | NC_024214_p20 | protein of an unannotated phage | phrog_7064 | tail protein | tail | 1 | 20346 | 21542 |
| YP_009036782.1 | NC_024214_p39 | protein of an unannotated phage | phrog_17482 | unknown function | unknown function | 1 | 28656 | 28913 |
| YP_009036759.1 | NC_024214_p16 | protein of an unannotated phage | phrog_4338 | unknown function | unknown function | 1 | 10949 | 11530 |
| YP_009036795.1 | NC_024214_p52 | protein of an unannotated phage | phrog_17887 | unknown function | unknown function | 1 | 33269 | 34459 |
| YP_009036747.1 | NC_024214_p4 | protein of an unannotated phage | phrog_4259 | unknown function | unknown function | 1 | 1298 | 1672 |
| YP_009036805.1 | NC_024214_p62 | protein of an unannotated phage | phrog_21840 | unknown function | unknown function | 1 | 41325 | 41816 |
| YP_009036789.1 | NC_024214_p46 | protein of an unannotated phage | phrog_19247 | unknown function | unknown function | 1 | 30831 | 31115 |
| YP_009036769.1 | NC_024214_p26 | protein of an unannotated phage | phrog_19023 | unknown function | unknown function | 1 | 23980 | 24240 |
| YP_009036760.1 | NC_024214_p17 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 11505 | 11888 |
| YP_009036799.1 | NC_024214_p56 | protein of an unannotated phage | phrog_18754 | unknown function | unknown function | 1 | 38958 | 39212 |
| YP_009036750.1 | NC_024214_p7 | protein of an unannotated phage | phrog_19428 | unknown function | unknown function | 1 | 2431 | 2808 |
| YP_009036800.1 | NC_024214_p57 | protein of an unannotated phage | phrog_20651 | unknown function | unknown function | 1 | 39212 | 39856 |
| YP_009036788.1 | NC_024214_p45 | protein of an unannotated phage | phrog_20861 | unknown function | unknown function | 1 | 30590 | 30826 |
| YP_009036757.1 | NC_024214_p14 | protein of an unannotated phage | phrog_2645 | major tail protein | tail | 1 | 9477 | 10394 |
| YP_009036786.1 | NC_024214_p43 | protein of an unannotated phage | phrog_21556 | unknown function | unknown function | 1 | 30210 | 30326 |
| YP_009036803.1 | NC_024214_p60 | protein of an unannotated phage | phrog_35542 | unknown function | unknown function | 1 | 40460 | 40621 |
| YP_009036764.1 | NC_024214_p21 | protein of an unannotated phage | phrog_21087 | unknown function | unknown function | 1 | 21545 | 21859 |
| YP_009036758.1 | NC_024214_p15 | protein of an unannotated phage | phrog_4282 | unknown function | unknown function | 1 | 10432 | 10866 |
| YP_009036811.1 | NC_024214_p68 | protein of an unannotated phage | phrog_21846 | unknown function | unknown function | 1 | 43644 | 44708 |
| YP_009036753.1 | NC_024214_p10 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 5193 | 6488 |