| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024329 |
Definition |
Podovirus Lau218 strain Abe, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Lauvirus. |
DB of origin |
REFSEQ |
Length |
39425 |
Host Name |
metagenomic |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
34.69 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009042149.1 | NC_024329_p18 | hypothetical protein | phrog_26586 | unknown function | unknown function | 1 | 12592 | 12786 |
| YP_009042175.1 | NC_024329_p44 | hypothetical protein | phrog_23124 | unknown function | unknown function | 1 | 31227 | 31769 |
| YP_009042178.1 | NC_024329_p47 | sulphite reductase, dissimilatory-type alpha subunit | phrog_24411 | unknown function | unknown function | 1 | 37677 | 38984 |
| YP_009042143.1 | NC_024329_p12 | DNA-directed RNA polymerase, phage-type | phrog_36028 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 6972 | 7934 |
| YP_009042152.1 | NC_024329_p21 | ribonucleotide reductase, large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 14232 | 15965 |
| YP_009042140.1 | NC_024329_p9 | hypothetical protein | phrog_23028 | unknown function | unknown function | 1 | 5095 | 5265 |
| YP_009042134.1 | NC_024329_p3 | hypothetical protein | phrog_20597 | unknown function | unknown function | 1 | 3072 | 3299 |
| YP_009042133.1 | NC_024329_p2 | hypothetical protein | phrog_26366 | unknown function | unknown function | 1 | 2204 | 2344 |
| YP_009042153.1 | NC_024329_p22 | hypothetical protein | phrog_24462 | unknown function | unknown function | 1 | 16061 | 16318 |
| YP_009042161.1 | NC_024329_p30 | FmdB family transcriptional regulator | phrog_1076 | FmdB-like transcriptional regulator | transcription regulation | 1 | 18575 | 18754 |
| YP_009042172.1 | NC_024329_p41 | hypothetical protein | phrog_26926 | unknown function | unknown function | 1 | 30299 | 30640 |
| YP_009042165.1 | NC_024329_p34 | hypothetical protein | phrog_24533 | unknown function | unknown function | 1 | 20956 | 21159 |
| YP_009042151.1 | NC_024329_p20 | hypothetical protein | phrog_799 | DNA methyltransferase | other | 1 | 13711 | 14235 |
| YP_009042146.1 | NC_024329_p15 | hypothetical protein | phrog_2340 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10882 | 11259 |
| YP_009042148.1 | NC_024329_p17 | endodeoxyribonuclease | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 12193 | 12585 |
| YP_009042150.1 | NC_024329_p19 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 12797 | 13543 |
| YP_009042173.1 | NC_024329_p42 | hypothetical protein | phrog_19883 | unknown function | unknown function | 1 | 30637 | 30960 |
| YP_009042171.1 | NC_024329_p40 | phage fiber protein | phrog_24456 | tail fiber protein | tail | 1 | 27354 | 30299 |
| YP_009042164.1 | NC_024329_p33 | hypothetical protein | phrog_25618 | unknown function | unknown function | 1 | 20788 | 20952 |
| YP_009042177.1 | NC_024329_p46 | hypothetical protein | phrog_22060 | unknown function | unknown function | 1 | 34140 | 37664 |
| YP_009042147.1 | NC_024329_p16 | DNA-directed DNA polymerase | phrog_15971 | DNA polymerase I | DNA, RNA and nucleotide metabolism | 1 | 11252 | 12193 |
| YP_009042158.1 | NC_024329_p27 | sulfur transfer protein, DsrC | phrog_17249 | unknown function | unknown function | 1 | 17374 | 17664 |
| YP_009042162.1 | NC_024329_p31 | N6 adenine-specific DNA methyltransferase, N12 class | phrog_56 | DNA methyltransferase | other | 1 | 18751 | 19701 |
| YP_009042159.1 | NC_024329_p28 | hypothetical protein | phrog_25755 | unknown function | unknown function | 1 | 17680 | 17955 |
| YP_009042179.1 | NC_024329_p48 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 39075 | 39302 |
| YP_009042136.1 | NC_024329_p5 | hypothetical protein | phrog_27348 | unknown function | unknown function | 1 | 3965 | 4162 |
| YP_009042166.1 | NC_024329_p35 | phage head-to-tail joining protein, podovirus-type | phrog_449 | head-tail adaptor | connector | 1 | 21170 | 22657 |
| YP_009042138.1 | NC_024329_p7 | hypothetical protein | phrog_25600 | unknown function | unknown function | 1 | 4419 | 4784 |
| YP_009042176.1 | NC_024329_p45 | hypothetical protein | phrog_25560 | unknown function | unknown function | 1 | 31741 | 34044 |
| YP_009042160.1 | NC_024329_p29 | thymidylate synthase ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 17952 | 18575 |
| YP_009042145.1 | NC_024329_p14 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 9170 | 10840 |
| YP_009042168.1 | NC_024329_p37 | phage capsid protein | phrog_267 | major head protein | head and packaging | 1 | 23621 | 24499 |
| YP_009042155.1 | NC_024329_p24 | hypothetical protein | phrog_19180 | unknown function | unknown function | 1 | 16763 | 17080 |
| YP_009042137.1 | NC_024329_p6 | hypothetical protein | phrog_24297 | unknown function | unknown function | 1 | 4200 | 4376 |
| YP_009042144.1 | NC_024329_p13 | phage ssDNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8487 | 9146 |
| YP_009042132.1 | NC_024329_p1 | maturase, NTPase containing | phrog_38 | terminase large subunit | head and packaging | 1 | 1 | 1686 |
| YP_009042163.1 | NC_024329_p32 | ribonucleotide reductase, small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 19789 | 20766 |
| YP_009042142.1 | NC_024329_p11 | DNA-directed RNA polymerase, phage-type | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 5455 | 6858 |
| YP_009042170.1 | NC_024329_p39 | phage tail protein | phrog_457 | tail protein | tail | 1 | 25156 | 27357 |
| YP_009042174.1 | NC_024329_p43 | hypothetical protein | phrog_25445 | unknown function | unknown function | 1 | 30964 | 31224 |
| YP_009042156.1 | NC_024329_p25 | hypothetical protein | phrog_24606 | unknown function | unknown function | 1 | 17091 | 17189 |
| YP_009042157.1 | NC_024329_p26 | hypothetical protein | phrog_24559 | unknown function | unknown function | 1 | 17149 | 17361 |
| YP_009042139.1 | NC_024329_p8 | hypothetical protein | phrog_24497 | unknown function | unknown function | 1 | 4813 | 5007 |
| YP_009042154.1 | NC_024329_p23 | hypothetical protein | phrog_22976 | unknown function | unknown function | 1 | 16489 | 16758 |
| YP_009042169.1 | NC_024329_p38 | phage tail protein | phrog_446 | tail protein | tail | 1 | 24573 | 25145 |
| YP_009042135.1 | NC_024329_p4 | N6 adenine-specific DNA methyltransferase, N12 class | phrog_799 | DNA methyltransferase | other | 1 | 3348 | 3920 |
| YP_009042141.1 | NC_024329_p10 | hypothetical protein | phrog_22301 | unknown function | unknown function | 1 | 5258 | 5458 |
| YP_009042167.1 | NC_024329_p36 | phage capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 22727 | 23509 |