| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024357 |
Definition |
Streptococcus phage K13, complete sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
39360 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
40.61 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009042744.1 | NC_024357_p27 | hypothetical protein | phrog_2275 | unknown function | unknown function | -1 | 24697 | 25011 |
| YP_009042766.1 | NC_024357_p49 | hypothetical protein | phrog_5570 | unknown function | unknown function | -1 | 35610 | 35885 |
| YP_009042729.1 | NC_024357_p12 | DUF3168 phage protein | phrog_78 | tail terminator | connector | -1 | 13408 | 13776 |
| YP_009042735.1 | NC_024357_p18 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 16835 | 17047 |
| YP_009042722.1 | NC_024357_p5 | hypothetical protein | phrog_4793 | unknown function | unknown function | -1 | 1742 | 1858 |
| YP_009042741.1 | NC_024357_p24 | phage terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 21166 | 22464 |
| YP_009042731.1 | NC_024357_p14 | hypothetical protein | phrog_2168 | unknown function | unknown function | -1 | 14263 | 14565 |
| YP_009042736.1 | NC_024357_p19 | hypothetical protein | phrog_14725 | unknown function | unknown function | -1 | 17188 | 17496 |
| YP_009042770.1 | NC_024357_p53 | phage integrase protein | phrog_95 | integrase | integration and excision | 1 | 37915 | 39360 |
| YP_009042739.1 | NC_024357_p22 | minor head phage protein | phrog_2841 | minor head protein | head and packaging | -1 | 18139 | 19722 |
| YP_009042748.1 | NC_024357_p31 | hypothetical protein | phrog_121 | unknown function | unknown function | -1 | 26775 | 27293 |
| YP_009042750.1 | NC_024357_p33 | Lactococcus phage M3 protein | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 27609 | 28124 |
| YP_009042759.1 | NC_024357_p42 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 31856 | 32077 |
| YP_009042755.1 | NC_024357_p38 | hypothetical protein | phrog_2553 | unknown function | unknown function | -1 | 30898 | 31092 |
| YP_009042721.1 | NC_024357_p4 | hypothetical protein | phrog_1137 | unknown function | unknown function | -1 | 1558 | 1761 |
| YP_009042747.1 | NC_024357_p30 | hypothetical protein | phrog_4667 | unknown function | unknown function | -1 | 25931 | 26101 |
| YP_009042763.1 | NC_024357_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34168 | 34302 |
| YP_009042764.1 | NC_024357_p47 | hypothetical protein | phrog_8659 | unknown function | unknown function | -1 | 34586 | 34789 |
| YP_009042761.1 | NC_024357_p44 | ATP-binding phage protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 32456 | 33310 |
| YP_009042758.1 | NC_024357_p41 | hypothetical protein | phrog_8343 | unknown function | unknown function | -1 | 31601 | 31855 |
| YP_009042745.1 | NC_024357_p28 | hypothetical protein | phrog_98 | unknown function | unknown function | -1 | 25204 | 25617 |
| YP_009042733.1 | NC_024357_p16 | carbohydrate-binding phage protein | phrog_422 | major head protein | head and packaging | -1 | 15093 | 16118 |
| YP_009042762.1 | NC_024357_p45 | phage replication initiation protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | -1 | 33320 | 34171 |
| YP_009042746.1 | NC_024357_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25674 | 25805 |
| YP_009042760.1 | NC_024357_p43 | hypothetical protein | phrog_3624 | unknown function | unknown function | -1 | 32077 | 32193 |
| YP_009042727.1 | NC_024357_p10 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 12607 | 12987 |
| YP_009042742.1 | NC_024357_p25 | phage terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | -1 | 22442 | 22954 |
| YP_009042737.1 | NC_024357_p20 | hypothetical protein | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 17518 | 17931 |
| YP_009042743.1 | NC_024357_p26 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 24218 | 24622 |
| YP_009042767.1 | NC_024357_p50 | phage DNA binding protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 35854 | 36870 |
| YP_009042751.1 | NC_024357_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28121 | 28279 |
| YP_009042738.1 | NC_024357_p21 | hypothetical protein | phrog_3514 | unknown function | unknown function | -1 | 17928 | 18137 |
| YP_009042752.1 | NC_024357_p35 | DUF1351 phage protein | phrog_674 | unknown function | unknown function | -1 | 28622 | 29647 |
| YP_009042768.1 | NC_024357_p51 | PemK domain phage protein | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | 1 | 36872 | 37636 |
| YP_009042719.1 | NC_024357_p2 | hypothetical protein | phrog_1625 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | -1 | 897 | 1196 |
| YP_009042718.1 | NC_024357_p1 | phage holin | phrog_608 | holin | lysis | -1 | 558 | 893 |
| YP_009042730.1 | NC_024357_p13 | phage tail protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 13773 | 14240 |
| YP_009042725.1 | NC_024357_p8 | structural phage protein | phrog_1535 | tail length tape measure protein | tail | -1 | 8578 | 12231 |
| YP_009042765.1 | NC_024357_p48 | hypothetical protein | phrog_4488 | unknown function | unknown function | -1 | 35414 | 35536 |
| YP_009042753.1 | NC_024357_p36 | RecT family phage protein | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29649 | 30389 |
| YP_009042749.1 | NC_024357_p32 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 27280 | 27594 |
| YP_009042723.1 | NC_024357_p6 | PblB-type antireceptor | phrog_1210 | PblB-type receptor binding | other | -1 | 1855 | 8178 |
| YP_009042726.1 | NC_024357_p9 | hypothetical protein | phrog_2066 | unknown function | unknown function | -1 | 12218 | 12568 |
| YP_009042728.1 | NC_024357_p11 | phage tail protein | phrog_158 | major tail protein | tail | -1 | 12992 | 13405 |
| YP_009042740.1 | NC_024357_p23 | phage portal protein | phrog_64 | portal protein | head and packaging | -1 | 19685 | 20986 |
| YP_009042724.1 | NC_024357_p7 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 8219 | 8569 |
| YP_009042754.1 | NC_024357_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30405 | 30695 |
| YP_009042720.1 | NC_024357_p3 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 1205 | 1555 |
| YP_009042732.1 | NC_024357_p15 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 14895 | 15083 |
| YP_009042757.1 | NC_024357_p40 | hypothetical protein | phrog_3819 | unknown function | unknown function | -1 | 31328 | 31588 |
| YP_009042769.1 | NC_024357_p52 | hypothetical protein | phrog_37776 | unknown function | unknown function | -1 | 37663 | 37794 |
| YP_009042756.1 | NC_024357_p39 | hypothetical protein | phrog_5637 | unknown function | unknown function | -1 | 31198 | 31341 |
| YP_009042734.1 | NC_024357_p17 | DUF4355 phage protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 16141 | 16665 |