Genomic map of Streptococcus phage K13 (NC_024357)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024357
Definition
Streptococcus phage K13, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39360
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
40.61
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009042744.1 NC_024357_p27 hypothetical protein phrog_2275 unknown function unknown function -1 24697 25011
YP_009042766.1 NC_024357_p49 hypothetical protein phrog_5570 unknown function unknown function -1 35610 35885
YP_009042729.1 NC_024357_p12 DUF3168 phage protein phrog_78 tail terminator connector -1 13408 13776
YP_009042735.1 NC_024357_p18 hypothetical protein phrog_774 unknown function unknown function -1 16835 17047
YP_009042722.1 NC_024357_p5 hypothetical protein phrog_4793 unknown function unknown function -1 1742 1858
YP_009042741.1 NC_024357_p24 phage terminase, large subunit phrog_2 terminase large subunit head and packaging -1 21166 22464
YP_009042731.1 NC_024357_p14 hypothetical protein phrog_2168 unknown function unknown function -1 14263 14565
YP_009042736.1 NC_024357_p19 hypothetical protein phrog_14725 unknown function unknown function -1 17188 17496
YP_009042770.1 NC_024357_p53 phage integrase protein phrog_95 integrase integration and excision 1 37915 39360
YP_009042739.1 NC_024357_p22 minor head phage protein phrog_2841 minor head protein head and packaging -1 18139 19722
YP_009042748.1 NC_024357_p31 hypothetical protein phrog_121 unknown function unknown function -1 26775 27293
YP_009042750.1 NC_024357_p33 Lactococcus phage M3 protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 27609 28124
YP_009042759.1 NC_024357_p42 hypothetical protein phrog_2648 unknown function unknown function -1 31856 32077
YP_009042755.1 NC_024357_p38 hypothetical protein phrog_2553 unknown function unknown function -1 30898 31092
YP_009042721.1 NC_024357_p4 hypothetical protein phrog_1137 unknown function unknown function -1 1558 1761
YP_009042747.1 NC_024357_p30 hypothetical protein phrog_4667 unknown function unknown function -1 25931 26101
YP_009042763.1 NC_024357_p46 hypothetical protein singleton unknown function unknown function -1 34168 34302
YP_009042764.1 NC_024357_p47 hypothetical protein phrog_8659 unknown function unknown function -1 34586 34789
YP_009042761.1 NC_024357_p44 ATP-binding phage protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism -1 32456 33310
YP_009042758.1 NC_024357_p41 hypothetical protein phrog_8343 unknown function unknown function -1 31601 31855
YP_009042745.1 NC_024357_p28 hypothetical protein phrog_98 unknown function unknown function -1 25204 25617
YP_009042733.1 NC_024357_p16 carbohydrate-binding phage protein phrog_422 major head protein head and packaging -1 15093 16118
YP_009042762.1 NC_024357_p45 phage replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism -1 33320 34171
YP_009042746.1 NC_024357_p29 hypothetical protein singleton unknown function unknown function -1 25674 25805
YP_009042760.1 NC_024357_p43 hypothetical protein phrog_3624 unknown function unknown function -1 32077 32193
YP_009042727.1 NC_024357_p10 hypothetical protein phrog_183 tail chaperone protein tail -1 12607 12987
YP_009042742.1 NC_024357_p25 phage terminase, small subunit phrog_51 terminase small subunit head and packaging -1 22442 22954
YP_009042737.1 NC_024357_p20 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 17518 17931
YP_009042743.1 NC_024357_p26 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 24218 24622
YP_009042767.1 NC_024357_p50 phage DNA binding protein phrog_4 transcriptional repressor transcription regulation 1 35854 36870
YP_009042751.1 NC_024357_p34 hypothetical protein singleton unknown function unknown function -1 28121 28279
YP_009042738.1 NC_024357_p21 hypothetical protein phrog_3514 unknown function unknown function -1 17928 18137
YP_009042752.1 NC_024357_p35 DUF1351 phage protein phrog_674 unknown function unknown function -1 28622 29647
YP_009042768.1 NC_024357_p51 PemK domain phage protein phrog_1412 antitoxin mazE-like moron, auxiliary metabolic gene and host takeover 1 36872 37636
YP_009042719.1 NC_024357_p2 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover -1 897 1196
YP_009042718.1 NC_024357_p1 phage holin phrog_608 holin lysis -1 558 893
YP_009042730.1 NC_024357_p13 phage tail protein phrog_5 tail completion or Neck1 protein connector -1 13773 14240
YP_009042725.1 NC_024357_p8 structural phage protein phrog_1535 tail length tape measure protein tail -1 8578 12231
YP_009042765.1 NC_024357_p48 hypothetical protein phrog_4488 unknown function unknown function -1 35414 35536
YP_009042753.1 NC_024357_p36 RecT family phage protein phrog_2760 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29649 30389
YP_009042749.1 NC_024357_p32 hypothetical protein phrog_834 unknown function unknown function -1 27280 27594
YP_009042723.1 NC_024357_p6 PblB-type antireceptor phrog_1210 PblB-type receptor binding other -1 1855 8178
YP_009042726.1 NC_024357_p9 hypothetical protein phrog_2066 unknown function unknown function -1 12218 12568
YP_009042728.1 NC_024357_p11 phage tail protein phrog_158 major tail protein tail -1 12992 13405
YP_009042740.1 NC_024357_p23 phage portal protein phrog_64 portal protein head and packaging -1 19685 20986
YP_009042724.1 NC_024357_p7 hypothetical protein phrog_1194 unknown function unknown function -1 8219 8569
YP_009042754.1 NC_024357_p37 hypothetical protein singleton unknown function unknown function -1 30405 30695
YP_009042720.1 NC_024357_p3 hypothetical protein phrog_1164 unknown function unknown function -1 1205 1555
YP_009042732.1 NC_024357_p15 hypothetical protein phrog_933 unknown function unknown function -1 14895 15083
YP_009042757.1 NC_024357_p40 hypothetical protein phrog_3819 unknown function unknown function -1 31328 31588
YP_009042769.1 NC_024357_p52 hypothetical protein phrog_37776 unknown function unknown function -1 37663 37794
YP_009042756.1 NC_024357_p39 hypothetical protein phrog_5637 unknown function unknown function -1 31198 31341
YP_009042734.1 NC_024357_p17 DUF4355 phage protein phrog_172 head scaffolding protein head and packaging -1 16141 16665