| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024361 |
Definition |
Streptococcus phage DCC1738, complete sequence. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
38392 |
Host Name |
Streptococcus pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
40.81 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009043174.1 | NC_024361_p2 | phage holin | phrog_199 | holin | lysis | -1 | 691 | 1107 |
| YP_009043221.1 | NC_024361_p49 | hypothetical protein | phrog_1534 | unknown function | unknown function | -1 | 33571 | 33741 |
| YP_009043224.1 | NC_024361_p52 | hypothetical protein | phrog_5570 | unknown function | unknown function | -1 | 34622 | 34897 |
| YP_009043187.1 | NC_024361_p15 | hypothetical protein | phrog_933 | unknown function | unknown function | -1 | 14879 | 15067 |
| YP_009043189.1 | NC_024361_p17 | carbohydrate-binding phage protein | phrog_544 | major head protein | head and packaging | -1 | 15251 | 16096 |
| YP_009043195.1 | NC_024361_p23 | phage terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | -1 | 21754 | 22215 |
| YP_009043201.1 | NC_024361_p29 | phage endodeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 25215 | 25502 |
| YP_009043199.1 | NC_024361_p27 | hypothetical protein | phrog_834 | unknown function | unknown function | -1 | 24375 | 24704 |
| YP_009043200.1 | NC_024361_p28 | hypothetical protein | phrog_2131 | unknown function | unknown function | -1 | 24749 | 25171 |
| YP_009043214.1 | NC_024361_p42 | hypothetical protein | phrog_2648 | unknown function | unknown function | -1 | 30790 | 31011 |
| YP_009043225.1 | NC_024361_p53 | phage DNA binding protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 35105 | 35842 |
| YP_009043196.1 | NC_024361_p24 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | -1 | 22588 | 23049 |
| YP_009043228.1 | NC_024361_p56 | phage integrase protein | phrog_95 | integrase | integration and excision | 1 | 36947 | 38392 |
| YP_009043192.1 | NC_024361_p20 | minor head phage protein | phrog_2841 | minor head protein | head and packaging | -1 | 17538 | 18971 |
| YP_009043213.1 | NC_024361_p41 | hypothetical protein | phrog_8343 | unknown function | unknown function | -1 | 30535 | 30789 |
| YP_009043220.1 | NC_024361_p48 | hypothetical protein | phrog_8659 | unknown function | unknown function | -1 | 33258 | 33437 |
| YP_009043198.1 | NC_024361_p26 | hypothetical protein | phrog_121 | unknown function | unknown function | -1 | 23699 | 24385 |
| YP_009043206.1 | NC_024361_p34 | hypothetical protein | phrog_4027 | unknown function | unknown function | -1 | 27513 | 27836 |
| YP_009043215.1 | NC_024361_p43 | hypothetical protein | phrog_3624 | unknown function | unknown function | -1 | 31011 | 31172 |
| YP_009043197.1 | NC_024361_p25 | hypothetical protein | phrog_2275 | unknown function | unknown function | -1 | 23124 | 23438 |
| YP_009043181.1 | NC_024361_p9 | hypothetical protein | phrog_2066 | unknown function | unknown function | -1 | 12199 | 12549 |
| YP_009043194.1 | NC_024361_p22 | phage terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 20478 | 21776 |
| YP_009043176.1 | NC_024361_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1470 | 1601 |
| YP_009043210.1 | NC_024361_p38 | hypothetical protein | phrog_16291 | unknown function | unknown function | -1 | 29823 | 30008 |
| YP_009043178.1 | NC_024361_p6 | PblB-type antireceptor | phrog_1210 | PblB-type receptor binding | other | -1 | 1767 | 8159 |
| YP_009043209.1 | NC_024361_p37 | RecT family phage protein | phrog_2760 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29053 | 29805 |
| YP_009043208.1 | NC_024361_p36 | DUF1351 phage protein | phrog_674 | unknown function | unknown function | -1 | 28003 | 29043 |
| YP_009043185.1 | NC_024361_p13 | phage tail protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 13757 | 14083 |
| YP_009043216.1 | NC_024361_p44 | phage antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 31244 | 31969 |
| YP_009043179.1 | NC_024361_p7 | hypothetical protein | phrog_1194 | unknown function | unknown function | -1 | 8200 | 8550 |
| YP_009043180.1 | NC_024361_p8 | structural phage protein | phrog_1535 | tail length tape measure protein | tail | -1 | 8559 | 12212 |
| YP_009043186.1 | NC_024361_p14 | hypothetical protein | phrog_2168 | unknown function | unknown function | -1 | 14247 | 14549 |
| YP_009043188.1 | NC_024361_p16 | hypothetical protein | phrog_2250 | unknown function | unknown function | -1 | 15057 | 15239 |
| YP_009043227.1 | NC_024361_p55 | hypothetical protein | phrog_37776 | unknown function | unknown function | -1 | 36695 | 36826 |
| YP_009043193.1 | NC_024361_p21 | phage portal protein | phrog_64 | portal protein | head and packaging | -1 | 18997 | 20298 |
| YP_009043212.1 | NC_024361_p40 | hypothetical protein | phrog_3819 | unknown function | unknown function | -1 | 30262 | 30522 |
| YP_009043207.1 | NC_024361_p35 | hypothetical protein | phrog_24662 | unknown function | unknown function | -1 | 27839 | 28000 |
| YP_009043219.1 | NC_024361_p47 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 32879 | 33067 |
| YP_009043175.1 | NC_024361_p3 | hypothetical protein | phrog_1164 | unknown function | unknown function | -1 | 1117 | 1467 |
| YP_009043226.1 | NC_024361_p54 | hypothetical protein | phrog_13411 | MazF-like growth inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 36230 | 36664 |
| YP_009043191.1 | NC_024361_p19 | hypothetical protein | phrog_774 | unknown function | unknown function | -1 | 16857 | 17069 |
| YP_009043184.1 | NC_024361_p12 | DUF3168 phage protein | phrog_78 | tail terminator | connector | -1 | 13392 | 13760 |
| YP_009043218.1 | NC_024361_p46 | hypothetical protein | phrog_1456 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32314 | 32739 |
| YP_009043173.1 | NC_024361_p1 | phage holin | phrog_608 | holin | lysis | -1 | 355 | 687 |
| YP_009043217.1 | NC_024361_p45 | hypothetical protein | phrog_4192 | unknown function | unknown function | -1 | 31993 | 32196 |
| YP_009043204.1 | NC_024361_p32 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 26674 | 27090 |
| YP_009043183.1 | NC_024361_p11 | phage tail protein | phrog_158 | major tail protein | tail | -1 | 12973 | 13386 |
| YP_009043202.1 | NC_024361_p30 | hypothetical protein | phrog_1341 | unknown function | unknown function | -1 | 25640 | 25969 |
| YP_009043177.1 | NC_024361_p5 | hypothetical protein | phrog_4793 | unknown function | unknown function | -1 | 1654 | 1770 |
| YP_009043222.1 | NC_024361_p50 | hypothetical protein | phrog_2542 | unknown function | unknown function | 1 | 33940 | 34389 |
| YP_009043205.1 | NC_024361_p33 | hypothetical protein | phrog_5262 | unknown function | unknown function | -1 | 27087 | 27203 |
| YP_009043203.1 | NC_024361_p31 | hypothetical protein | phrog_954 | DNA methyltransferase | other | -1 | 26158 | 26664 |
| YP_009043223.1 | NC_024361_p51 | hypothetical protein | phrog_2798 | unknown function | unknown function | -1 | 34380 | 34511 |
| YP_009043190.1 | NC_024361_p18 | DUF4355 phage protein | phrog_172 | head scaffolding protein | head and packaging | -1 | 16103 | 16687 |
| YP_009043182.1 | NC_024361_p10 | hypothetical protein | phrog_183 | tail chaperone protein | tail | -1 | 12588 | 12968 |
| YP_009043211.1 | NC_024361_p39 | hypothetical protein | phrog_4614 | unknown function | unknown function | -1 | 30074 | 30190 |