Genomic map of Streptococcus phage DCC1738 (NC_024361)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024361
Definition
Streptococcus phage DCC1738, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38392
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
40.81
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009043174.1 NC_024361_p2 phage holin phrog_199 holin lysis -1 691 1107
YP_009043221.1 NC_024361_p49 hypothetical protein phrog_1534 unknown function unknown function -1 33571 33741
YP_009043224.1 NC_024361_p52 hypothetical protein phrog_5570 unknown function unknown function -1 34622 34897
YP_009043187.1 NC_024361_p15 hypothetical protein phrog_933 unknown function unknown function -1 14879 15067
YP_009043189.1 NC_024361_p17 carbohydrate-binding phage protein phrog_544 major head protein head and packaging -1 15251 16096
YP_009043195.1 NC_024361_p23 phage terminase, small subunit phrog_51 terminase small subunit head and packaging -1 21754 22215
YP_009043201.1 NC_024361_p29 phage endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 25215 25502
YP_009043199.1 NC_024361_p27 hypothetical protein phrog_834 unknown function unknown function -1 24375 24704
YP_009043200.1 NC_024361_p28 hypothetical protein phrog_2131 unknown function unknown function -1 24749 25171
YP_009043214.1 NC_024361_p42 hypothetical protein phrog_2648 unknown function unknown function -1 30790 31011
YP_009043225.1 NC_024361_p53 phage DNA binding protein phrog_4 transcriptional repressor transcription regulation 1 35105 35842
YP_009043196.1 NC_024361_p24 hypothetical protein phrog_36 transcriptional regulator transcription regulation -1 22588 23049
YP_009043228.1 NC_024361_p56 phage integrase protein phrog_95 integrase integration and excision 1 36947 38392
YP_009043192.1 NC_024361_p20 minor head phage protein phrog_2841 minor head protein head and packaging -1 17538 18971
YP_009043213.1 NC_024361_p41 hypothetical protein phrog_8343 unknown function unknown function -1 30535 30789
YP_009043220.1 NC_024361_p48 hypothetical protein phrog_8659 unknown function unknown function -1 33258 33437
YP_009043198.1 NC_024361_p26 hypothetical protein phrog_121 unknown function unknown function -1 23699 24385
YP_009043206.1 NC_024361_p34 hypothetical protein phrog_4027 unknown function unknown function -1 27513 27836
YP_009043215.1 NC_024361_p43 hypothetical protein phrog_3624 unknown function unknown function -1 31011 31172
YP_009043197.1 NC_024361_p25 hypothetical protein phrog_2275 unknown function unknown function -1 23124 23438
YP_009043181.1 NC_024361_p9 hypothetical protein phrog_2066 unknown function unknown function -1 12199 12549
YP_009043194.1 NC_024361_p22 phage terminase, large subunit phrog_2 terminase large subunit head and packaging -1 20478 21776
YP_009043176.1 NC_024361_p4 hypothetical protein singleton unknown function unknown function -1 1470 1601
YP_009043210.1 NC_024361_p38 hypothetical protein phrog_16291 unknown function unknown function -1 29823 30008
YP_009043178.1 NC_024361_p6 PblB-type antireceptor phrog_1210 PblB-type receptor binding other -1 1767 8159
YP_009043209.1 NC_024361_p37 RecT family phage protein phrog_2760 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29053 29805
YP_009043208.1 NC_024361_p36 DUF1351 phage protein phrog_674 unknown function unknown function -1 28003 29043
YP_009043185.1 NC_024361_p13 phage tail protein phrog_5 tail completion or Neck1 protein connector -1 13757 14083
YP_009043216.1 NC_024361_p44 phage antirepressor protein phrog_63 anti-repressor Ant transcription regulation -1 31244 31969
YP_009043179.1 NC_024361_p7 hypothetical protein phrog_1194 unknown function unknown function -1 8200 8550
YP_009043180.1 NC_024361_p8 structural phage protein phrog_1535 tail length tape measure protein tail -1 8559 12212
YP_009043186.1 NC_024361_p14 hypothetical protein phrog_2168 unknown function unknown function -1 14247 14549
YP_009043188.1 NC_024361_p16 hypothetical protein phrog_2250 unknown function unknown function -1 15057 15239
YP_009043227.1 NC_024361_p55 hypothetical protein phrog_37776 unknown function unknown function -1 36695 36826
YP_009043193.1 NC_024361_p21 phage portal protein phrog_64 portal protein head and packaging -1 18997 20298
YP_009043212.1 NC_024361_p40 hypothetical protein phrog_3819 unknown function unknown function -1 30262 30522
YP_009043207.1 NC_024361_p35 hypothetical protein phrog_24662 unknown function unknown function -1 27839 28000
YP_009043219.1 NC_024361_p47 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 32879 33067
YP_009043175.1 NC_024361_p3 hypothetical protein phrog_1164 unknown function unknown function -1 1117 1467
YP_009043226.1 NC_024361_p54 hypothetical protein phrog_13411 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover 1 36230 36664
YP_009043191.1 NC_024361_p19 hypothetical protein phrog_774 unknown function unknown function -1 16857 17069
YP_009043184.1 NC_024361_p12 DUF3168 phage protein phrog_78 tail terminator connector -1 13392 13760
YP_009043218.1 NC_024361_p46 hypothetical protein phrog_1456 DNA binding protein DNA, RNA and nucleotide metabolism -1 32314 32739
YP_009043173.1 NC_024361_p1 phage holin phrog_608 holin lysis -1 355 687
YP_009043217.1 NC_024361_p45 hypothetical protein phrog_4192 unknown function unknown function -1 31993 32196
YP_009043204.1 NC_024361_p32 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 26674 27090
YP_009043183.1 NC_024361_p11 phage tail protein phrog_158 major tail protein tail -1 12973 13386
YP_009043202.1 NC_024361_p30 hypothetical protein phrog_1341 unknown function unknown function -1 25640 25969
YP_009043177.1 NC_024361_p5 hypothetical protein phrog_4793 unknown function unknown function -1 1654 1770
YP_009043222.1 NC_024361_p50 hypothetical protein phrog_2542 unknown function unknown function 1 33940 34389
YP_009043205.1 NC_024361_p33 hypothetical protein phrog_5262 unknown function unknown function -1 27087 27203
YP_009043203.1 NC_024361_p31 hypothetical protein phrog_954 DNA methyltransferase other -1 26158 26664
YP_009043223.1 NC_024361_p51 hypothetical protein phrog_2798 unknown function unknown function -1 34380 34511
YP_009043190.1 NC_024361_p18 DUF4355 phage protein phrog_172 head scaffolding protein head and packaging -1 16103 16687
YP_009043182.1 NC_024361_p10 hypothetical protein phrog_183 tail chaperone protein tail -1 12588 12968
YP_009043211.1 NC_024361_p39 hypothetical protein phrog_4614 unknown function unknown function -1 30074 30190