Genomic map of Listeria phage List-36 (NC_024364)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024364
Definition
Listeria phage List-36, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus List36.
DB of origin
REFSEQ
Length
131952
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
174
%GC
36.01
Number of singletons
8
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009043397.1 NC_024364_p21 hypothetical protein phrog_2356 unknown function unknown function -1 14088 14570
YP_009043450.1 NC_024364_p74 hypothetical protein phrog_975 baseplate protein tail -1 65185 65895
YP_009043392.1 NC_024364_p16 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 10337 11353
YP_009043434.1 NC_024364_p58 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 43520 44167
YP_009043488.1 NC_024364_p112 hypothetical protein singleton unknown function unknown function 1 101625 101837
YP_009043384.1 NC_024364_p8 hypothetical protein phrog_1104 virion structural protein head and packaging -1 5385 5852
YP_009043465.1 NC_024364_p89 hypothetical protein phrog_9462 unknown function unknown function -1 81883 82248
YP_009043455.1 NC_024364_p79 hypothetical protein phrog_1047 tail associated lysin tail -1 71154 74870
YP_009043541.1 NC_024364_p165 hypothetical protein phrog_9612 unknown function unknown function -1 127654 127926
YP_009043459.1 NC_024364_p83 hypothetical protein phrog_279 tail sheath tail -1 76678 78366
YP_009043443.1 NC_024364_p67 hypothetical protein phrog_9920 unknown function unknown function -1 54046 54456
YP_009043451.1 NC_024364_p75 hypothetical protein phrog_1073 unknown function unknown function -1 65882 66415
YP_009043431.1 NC_024364_p55 hypothetical protein singleton unknown function unknown function -1 42873 42986
YP_009043511.1 NC_024364_p135 hypothetical protein phrog_9937 unknown function unknown function 1 115718 115945
YP_009043463.1 NC_024364_p87 hypothetical protein phrog_1004 virion structural protein head and packaging -1 80159 80977
YP_009043462.1 NC_024364_p86 hypothetical protein phrog_1127 unknown function unknown function -1 79542 80108
YP_009043549.1 NC_024364_p173 hypothetical protein phrog_5149 unknown function unknown function -1 131015 131236
YP_009043519.1 NC_024364_p143 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 118900 119673
YP_009043509.1 NC_024364_p133 hypothetical protein phrog_10136 unknown function unknown function 1 114038 114460
YP_009043379.1 NC_024364_p3 hypothetical protein phrog_10429 unknown function unknown function -1 1965 2153
YP_009043550.1 NC_024364_p174 hypothetical protein phrog_4264 unknown function unknown function -1 131411 131752
YP_009043505.1 NC_024364_p129 hypothetical protein phrog_1934 unknown function unknown function 1 112238 112657
YP_009043378.1 NC_024364_p2 hypothetical protein phrog_3543 unknown function unknown function -1 557 916
YP_009043436.1 NC_024364_p60 hypothetical protein phrog_1070 anti-sigma factor moron, auxiliary metabolic gene and host takeover -1 45275 45865
YP_009043401.1 NC_024364_p25 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 16547 17818
YP_009043410.1 NC_024364_p34 hypothetical protein phrog_1069 unknown function unknown function -1 24246 24722
YP_009043423.1 NC_024364_p47 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 36914 37225
YP_009043547.1 NC_024364_p171 hypothetical protein phrog_10501 unknown function unknown function -1 130245 130523
YP_009043399.1 NC_024364_p23 hypothetical protein phrog_1080 unknown function unknown function -1 15591 16136
YP_009043432.1 NC_024364_p56 hypothetical protein phrog_7516 unknown function unknown function -1 42979 43302
YP_009043402.1 NC_024364_p26 hypothetical protein phrog_1850 exopolyphosphatase other -1 17877 18806
YP_009043406.1 NC_024364_p30 hypothetical protein phrog_1025 RNA polymerase sigma factor transcription regulation -1 20558 21196
YP_009043520.1 NC_024364_p144 hypothetical protein phrog_10214 unknown function unknown function -1 119717 120073
YP_009043513.1 NC_024364_p137 hypothetical protein phrog_9517 unknown function unknown function 1 116769 117050
YP_009043545.1 NC_024364_p169 hypothetical protein phrog_9566 unknown function unknown function -1 129198 129455
YP_009043391.1 NC_024364_p15 hypothetical protein phrog_7005 unknown function unknown function -1 9505 10350
YP_009043494.1 NC_024364_p118 hypothetical protein phrog_9650 unknown function unknown function 1 106377 106580
YP_009043476.1 NC_024364_p100 hypothetical protein phrog_13012 unknown function unknown function -1 91132 91248
YP_009043393.1 NC_024364_p17 hypothetical protein phrog_9512 unknown function unknown function -1 11358 12062
YP_009043467.1 NC_024364_p91 hypothetical protein phrog_1133 unknown function unknown function -1 83906 84811
YP_009043409.1 NC_024364_p33 single-stranded DNA-binding protein phrog_1867 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22949 24208
YP_009043474.1 NC_024364_p98 hypothetical protein phrog_1991 unknown function unknown function -1 90134 90514
YP_009043512.1 NC_024364_p136 hypothetical protein phrog_9379 unknown function unknown function 1 115942 116484
YP_009043543.1 NC_024364_p167 hypothetical protein phrog_9527 unknown function unknown function -1 128380 128592
YP_009043533.1 NC_024364_p157 hypothetical protein phrog_12028 unknown function unknown function -1 125334 125639
YP_009043539.1 NC_024364_p163 hypothetical protein phrog_1933 unknown function unknown function -1 127134 127331
YP_009043532.1 NC_024364_p156 hypothetical protein phrog_12804 unknown function unknown function -1 124880 125239
YP_009043461.1 NC_024364_p85 hypothetical protein phrog_1000 unknown function unknown function -1 78690 79529
YP_009043383.1 NC_024364_p7 hypothetical protein phrog_9186 unknown function unknown function -1 4194 5270
YP_009043530.1 NC_024364_p154 hypothetical protein phrog_7738 unknown function unknown function -1 123107 123532
YP_009043458.1 NC_024364_p82 hypothetical protein phrog_985 virion structural protein head and packaging -1 76188 76610
YP_009043422.1 NC_024364_p46 thioredoxin phrog_20804 thioredoxin domain DNA, RNA and nucleotide metabolism -1 36811 36939
YP_009043515.1 NC_024364_p139 hypothetical protein phrog_10844 unknown function unknown function 1 117240 117524
YP_009043445.1 NC_024364_p69 hypothetical protein phrog_1074 unknown function unknown function -1 55783 56004
YP_009043442.1 NC_024364_p66 hypothetical protein phrog_134 unknown function unknown function -1 53912 54049
YP_009043387.1 NC_024364_p11 hypothetical protein phrog_10568 unknown function unknown function -1 7206 7784
YP_009043478.1 NC_024364_p102 terminase large subunit phrog_675 terminase large subunit head and packaging -1 92242 93795
YP_009043480.1 NC_024364_p104 hypothetical protein phrog_1063 terminase small subunit head and packaging -1 94426 94842
YP_009043405.1 NC_024364_p29 hypothetical protein singleton unknown function unknown function -1 20248 20499
YP_009043390.1 NC_024364_p14 hypothetical protein phrog_7350 unknown function unknown function -1 8976 9443
YP_009043540.1 NC_024364_p164 hypothetical protein phrog_24326 unknown function unknown function -1 127356 127571
YP_009043389.1 NC_024364_p13 hypothetical protein phrog_7350 unknown function unknown function -1 8392 8970
YP_009043472.1 NC_024364_p96 hypothetical protein phrog_6631 unknown function unknown function -1 88132 88872
YP_009043412.1 NC_024364_p36 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism -1 27211 27708
YP_009043516.1 NC_024364_p140 hypothetical protein phrog_7296 unknown function unknown function 1 117743 118252
YP_009043489.1 NC_024364_p113 hypothetical protein phrog_6885 unknown function unknown function 1 102908 103126
YP_009043429.1 NC_024364_p53 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 41940 42560
YP_009043525.1 NC_024364_p149 hypothetical protein phrog_9728 unknown function unknown function -1 121511 121771
YP_009043495.1 NC_024364_p119 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 106688 107899
YP_009043548.1 NC_024364_p172 hypothetical protein phrog_7822 unknown function unknown function -1 130560 131009
YP_009043497.1 NC_024364_p121 hypothetical protein phrog_1017 unknown function unknown function 1 108217 108720
YP_009043435.1 NC_024364_p59 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 44214 45275
YP_009043526.1 NC_024364_p150 hypothetical protein phrog_3392 unknown function unknown function -1 121803 122150
YP_009043481.1 NC_024364_p105 hypothetical protein phrog_3395 membrane protein moron, auxiliary metabolic gene and host takeover -1 95104 95490
YP_009043508.1 NC_024364_p132 hypothetical protein phrog_10442 unknown function unknown function 1 113485 113973
YP_009043417.1 NC_024364_p41 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 32486 34279
YP_009043528.1 NC_024364_p152 hypothetical protein phrog_923 unknown function unknown function -1 122332 122802
YP_009043400.1 NC_024364_p24 hypothetical protein phrog_7143 unknown function unknown function -1 16144 16527
YP_009043499.1 NC_024364_p123 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 108909 109445
YP_009043487.1 NC_024364_p111 hypothetical protein phrog_9389 unknown function unknown function 1 101207 101404
YP_009043473.1 NC_024364_p97 lysin, N-acetylmuramoyl-L-alanine amidase phrog_5182 endolysin lysis -1 89045 90070
YP_009043448.1 NC_024364_p72 hypothetical protein phrog_2386 virion structural protein head and packaging -1 60160 64089
YP_009043418.1 NC_024364_p42 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 34290 35204
YP_009043531.1 NC_024364_p155 hypothetical protein phrog_11450 unknown function unknown function -1 123685 124869
YP_009043521.1 NC_024364_p145 hypothetical protein singleton unknown function unknown function -1 120073 120225
YP_009043454.1 NC_024364_p78 secretory antigen SsaA-like protein phrog_1015 tail protein with lysin activity tail -1 68721 71108
YP_009043537.1 NC_024364_p161 hypothetical protein phrog_98 unknown function unknown function -1 126196 126600
YP_009043491.1 NC_024364_p115 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 103837 105357
YP_009043411.1 NC_024364_p35 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 24817 26985
YP_009043506.1 NC_024364_p130 tail fibers protein phrog_12982 tail fiber protein tail 1 112647 112844
YP_009043510.1 NC_024364_p134 hypothetical protein phrog_10246 unknown function unknown function 1 114462 115715
YP_009043394.1 NC_024364_p18 hypothetical protein phrog_6360 unknown function unknown function -1 12163 12609
YP_009043449.1 NC_024364_p73 baseplate phrog_6 baseplate wedge subunit tail -1 64125 65171
YP_009043388.1 NC_024364_p12 hypothetical protein phrog_10641 unknown function unknown function -1 7781 8353
YP_009043496.1 NC_024364_p120 hypothetical protein phrog_9717 unknown function unknown function 1 107946 108215
YP_009043456.1 NC_024364_p80 hypothetical protein phrog_1316 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism -1 74932 75525
YP_009043502.1 NC_024364_p126 hypothetical protein phrog_1238 phosphoheptose isomerase moron, auxiliary metabolic gene and host takeover 1 110839 111216
YP_009043522.1 NC_024364_p146 hypothetical protein singleton unknown function unknown function -1 120263 120436
YP_009043407.1 NC_024364_p31 hypothetical protein phrog_1089 unknown function unknown function -1 21196 21573
YP_009043381.1 NC_024364_p5 hypothetical protein phrog_9011 unknown function unknown function -1 3041 3574
YP_009043535.1 NC_024364_p159 hypothetical protein phrog_7175 unknown function unknown function -1 125752 125973
YP_009043385.1 NC_024364_p9 hypothetical protein phrog_1007 unknown function unknown function -1 5867 6595
YP_009043398.1 NC_024364_p22 hypothetical protein phrog_984 unknown function unknown function -1 14581 15288
YP_009043527.1 NC_024364_p151 hypothetical protein phrog_6159 unknown function unknown function -1 122150 122335
YP_009043425.1 NC_024364_p49 ribonucleotide reduction protein phrog_883 flavodoxin moron, auxiliary metabolic gene and host takeover -1 37548 38000
YP_009043485.1 NC_024364_p109 hypothetical protein phrog_9075 unknown function unknown function 1 98241 98672
YP_009043486.1 NC_024364_p110 hypothetical protein phrog_1048 unknown function unknown function 1 98796 99071
YP_009043468.1 NC_024364_p92 hypothetical protein phrog_1028 head maturation protease head and packaging -1 84804 85598
YP_009043538.1 NC_024364_p162 hypothetical protein phrog_9360 unknown function unknown function -1 126903 127031
YP_009043415.1 NC_024364_p39 hypothetical protein phrog_1054 unknown function unknown function -1 29049 29837
YP_009043453.1 NC_024364_p77 glycerophosphoryl diester phosphodiesterase phrog_7994 glycerophosphoryl diester phosphodiesterase other -1 67171 68703
YP_009043457.1 NC_024364_p81 hypothetical protein phrog_1038 tail assembly chaperone tail -1 75593 76036
YP_009043482.1 NC_024364_p106 hypothetical protein phrog_1481 unknown function unknown function 1 96002 96235
YP_009043438.1 NC_024364_p62 recombination exonuclease phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 47863 48915
YP_009043414.1 NC_024364_p38 integration host factor phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism -1 28742 29056
YP_009043441.1 NC_024364_p65 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 52066 53811
YP_009043382.1 NC_024364_p6 hypothetical protein phrog_9719 unknown function unknown function -1 3577 4146
YP_009043470.1 NC_024364_p94 hypothetical protein phrog_1108 portal protein head and packaging -1 87357 87707
YP_009043546.1 NC_024364_p170 hypothetical protein phrog_14554 unknown function unknown function -1 129455 129709
YP_009043536.1 NC_024364_p160 hypothetical protein phrog_9107 unknown function unknown function -1 125975 126193
YP_009043514.1 NC_024364_p138 hypothetical protein phrog_9730 unknown function unknown function 1 117047 117166
YP_009043477.1 NC_024364_p101 hypothetical protein phrog_1917 virion structural protein head and packaging -1 91334 92173
YP_009043498.1 NC_024364_p122 hypothetical protein phrog_9898 unknown function unknown function 1 108721 108912
YP_009043469.1 NC_024364_p93 hypothetical protein phrog_12 portal protein head and packaging -1 85697 87340
YP_009043427.1 NC_024364_p51 ribonucleotide reductase of class Ib (aerobic) alpha subunit phrog_3844 NrdA-like aerobic NDP reductase large subunit moron, auxiliary metabolic gene and host takeover -1 39234 40265
YP_009043475.1 NC_024364_p99 hypothetical protein phrog_1116 unknown function unknown function -1 90504 91142
YP_009043483.1 NC_024364_p107 hypothetical protein phrog_937 hemolysin other 1 96260 96601
YP_009043493.1 NC_024364_p117 hypothetical protein phrog_990 metal-dependent phosphohydrolase other 1 105953 106384
YP_009043534.1 NC_024364_p158 hypothetical protein singleton unknown function unknown function -1 125636 125755
YP_009043479.1 NC_024364_p103 terminase large subunit phrog_5340 terminase large subunit head and packaging -1 94145 94426
YP_009043433.1 NC_024364_p57 hypothetical protein phrog_10262 unknown function unknown function -1 43299 43523
YP_009043416.1 NC_024364_p40 hypothetical protein phrog_9253 unknown function unknown function -1 29931 32390
YP_009043444.1 NC_024364_p68 hypothetical protein phrog_9794 unknown function unknown function -1 54488 55780
YP_009043386.1 NC_024364_p10 hypothetical protein phrog_9358 unknown function unknown function -1 6881 7213
YP_009043396.1 NC_024364_p20 hypothetical protein phrog_1113 unknown function unknown function -1 13144 14028
YP_009043446.1 NC_024364_p70 hypothetical protein phrog_877 unknown function unknown function -1 56050 59454
YP_009043523.1 NC_024364_p147 hypothetical protein singleton unknown function unknown function -1 120451 120639
YP_009043524.1 NC_024364_p148 hypothetical protein phrog_9112 unknown function unknown function -1 121099 121431
YP_009043395.1 NC_024364_p19 hypothetical protein phrog_9749 unknown function unknown function -1 12615 13049
YP_009043484.1 NC_024364_p108 hypothetical protein phrog_1215 unknown function unknown function 1 96651 96887
YP_009043408.1 NC_024364_p32 recombinase phrog_97 UvsX-like recombinase other -1 21635 22879
YP_009043420.1 NC_024364_p44 hypothetical protein phrog_9795 unknown function unknown function -1 36391 36528
YP_009043503.1 NC_024364_p127 hypothetical protein phrog_9695 unknown function unknown function 1 111233 111451
YP_009043377.1 NC_024364_p1 hypothetical protein phrog_10369 unknown function unknown function -1 325 474
YP_009043426.1 NC_024364_p50 ribonucleotide reductase of class Ia (aerobic),beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 37997 39028
YP_009043452.1 NC_024364_p76 hypothetical protein phrog_1011 virion structural protein head and packaging -1 66420 67133
YP_009043471.1 NC_024364_p95 hypothetical protein phrog_9678 unknown function unknown function -1 87709 87903
YP_009043380.1 NC_024364_p4 hypothetical protein phrog_9671 unknown function unknown function -1 2268 3026
YP_009043544.1 NC_024364_p168 hypothetical protein phrog_10584 unknown function unknown function -1 128797 128970
YP_009043466.1 NC_024364_p90 major capsid protein phrog_752 major head protein head and packaging -1 82330 83736
YP_009043542.1 NC_024364_p166 hypothetical protein phrog_9852 unknown function unknown function -1 128080 128367
YP_009043464.1 NC_024364_p88 hypothetical protein phrog_772 tail fiber protein tail -1 80995 81876
YP_009043413.1 NC_024364_p37 DNA polymerase I phrog_4008 DNA polymerase DNA, RNA and nucleotide metabolism -1 27824 28660
YP_009043437.1 NC_024364_p61 recombination related exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 45885 47768
YP_009043507.1 NC_024364_p131 hypothetical protein phrog_9902 unknown function unknown function 1 112847 113479
YP_009043424.1 NC_024364_p48 hypothetical protein phrog_9820 unknown function unknown function -1 37249 37545
YP_009043447.1 NC_024364_p71 hypothetical protein phrog_1394 virion structural protein head and packaging -1 59522 60043
YP_009043500.1 NC_024364_p124 hypothetical protein phrog_548 RNA ligase DNA, RNA and nucleotide metabolism 1 109459 110400
YP_009043419.1 NC_024364_p43 hypothetical protein phrog_12487 unknown function unknown function -1 35201 36388
YP_009043460.1 NC_024364_p84 hypothetical protein phrog_9471 unknown function unknown function -1 78370 78690
YP_009043428.1 NC_024364_p52 ribonucleotide reductase of class Ia (aerobic) alpha subunit phrog_3987 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism -1 40476 41825
YP_009043504.1 NC_024364_p128 phosphoesterase phrog_547 phosphoesterase other 1 111448 112065
YP_009043490.1 NC_024364_p114 hypothetical protein phrog_1257 ribosome associated inhibitor A; zinc finger domain moron, auxiliary metabolic gene and host takeover 1 103227 103439
YP_009043430.1 NC_024364_p54 hypothetical protein singleton unknown function unknown function -1 42563 42763
YP_009043518.1 NC_024364_p142 hypothetical protein phrog_9499 unknown function unknown function 1 118624 118887
YP_009043439.1 NC_024364_p63 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 48930 50393
YP_009043421.1 NC_024364_p45 thioredoxin phrog_9691 thioredoxin domain DNA, RNA and nucleotide metabolism -1 36531 36830
YP_009043501.1 NC_024364_p125 hypothetical protein phrog_9618 unknown function unknown function 1 110480 110836
YP_009043492.1 NC_024364_p116 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 105459 105701
YP_009043529.1 NC_024364_p153 hypothetical protein phrog_6964 unknown function unknown function -1 122799 123089
YP_009043517.1 NC_024364_p141 hypothetical protein phrog_9952 unknown function unknown function 1 118266 118574
YP_009043404.1 NC_024364_p28 hypothetical protein phrog_215 structural protein with Ig domain head and packaging -1 19297 19977
YP_009043440.1 NC_024364_p64 hypothetical protein phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 50411 52024
YP_009043403.1 NC_024364_p27 hypothetical protein phrog_9872 unknown function unknown function -1 18803 19189