| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024367 |
Definition |
Dinoroseobacter phage DFL12phi1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus. |
DB of origin |
REFSEQ |
Length |
75028 |
Host Name |
Dinoroseobacter shibae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
49.26 |
Number of singletons |
5 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009043737.1 | NC_024367_p57 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 61890 | 62339 |
| YP_009043724.1 | NC_024367_p44 | host-like protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 53510 | 53827 |
| YP_009043700.1 | NC_024367_p20 | hypothetical protein | phrog_2646 | unknown function | unknown function | 1 | 20180 | 20623 |
| YP_009043710.1 | NC_024367_p30 | hypothetical protein | phrog_4848 | unknown function | unknown function | -1 | 42099 | 42428 |
| YP_009043734.1 | NC_024367_p54 | hypothetical protein | phrog_1761 | unknown function | unknown function | -1 | 59491 | 59718 |
| YP_009043723.1 | NC_024367_p43 | RIIA-like protein | phrog_2979 | RIIA lysis inhibitor | lysis | -1 | 50828 | 53380 |
| YP_009043699.1 | NC_024367_p19 | hypothetical protein | phrog_2220 | unknown function | unknown function | 1 | 17442 | 20177 |
| YP_009043709.1 | NC_024367_p29 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 39480 | 42095 |
| YP_009043719.1 | NC_024367_p39 | hypothetical protein | phrog_33899 | unknown function | unknown function | -1 | 48422 | 48625 |
| YP_009043765.1 | NC_024367_p85 | hypothetical protein | phrog_34203 | unknown function | unknown function | -1 | 74390 | 74509 |
| YP_009043745.1 | NC_024367_p65 | hypothetical protein | phrog_12776 | unknown function | unknown function | -1 | 67078 | 67296 |
| YP_009043783.1 | NC_024367_p17 | hypothetical protein | phrog_2130 | unknown function | unknown function | 1 | 15316 | 16038 |
| YP_009043738.1 | NC_024367_p58 | hypothetical protein | phrog_16467 | unknown function | unknown function | -1 | 62332 | 62793 |
| YP_009043751.1 | NC_024367_p71 | hypothetical protein | phrog_28219 | unknown function | unknown function | -1 | 69407 | 69529 |
| YP_009043782.1 | NC_024367_p16 | hypothetical protein | phrog_1357 | major head protein | head and packaging | 1 | 13759 | 15204 |
| YP_009043778.1 | NC_024367_p12 | hypothetical protein | phrog_32876 | unknown function | unknown function | 1 | 9382 | 9528 |
| YP_009043748.1 | NC_024367_p68 | hypothetical protein | phrog_14069 | unknown function | unknown function | -1 | 68698 | 68895 |
| YP_009043732.1 | NC_024367_p52 | hypothetical protein | phrog_1627 | unknown function | unknown function | -1 | 58731 | 59060 |
| YP_009043773.1 | NC_024367_p7 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | 1 | 6727 | 7395 |
| YP_009043718.1 | NC_024367_p38 | hypothetical protein | phrog_2072 | unknown function | unknown function | -1 | 47991 | 48425 |
| YP_009043701.1 | NC_024367_p21 | hypothetical protein | phrog_14527 | unknown function | unknown function | 1 | 20634 | 22691 |
| YP_009043715.1 | NC_024367_p35 | hypothetical protein | phrog_14950 | unknown function | unknown function | -1 | 46813 | 47169 |
| YP_009043762.1 | NC_024367_p82 | hypothetical protein | phrog_28829 | unknown function | unknown function | -1 | 73162 | 73302 |
| YP_009043739.1 | NC_024367_p59 | hypothetical protein | phrog_20493 | unknown function | unknown function | -1 | 63002 | 63265 |
| YP_009043747.1 | NC_024367_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 68534 | 68701 |
| YP_009043717.1 | NC_024367_p37 | hypothetical protein | phrog_9905 | unknown function | unknown function | -1 | 47701 | 47994 |
| YP_009043725.1 | NC_024367_p45 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | -1 | 53808 | 54350 |
| YP_009043761.1 | NC_024367_p81 | hypothetical protein | phrog_35558 | unknown function | unknown function | -1 | 72930 | 73178 |
| YP_009043712.1 | NC_024367_p32 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | -1 | 42711 | 43988 |
| YP_009043771.1 | NC_024367_p5 | hypothetical protein | phrog_2109 | unknown function | unknown function | 1 | 4422 | 5111 |
| YP_009043729.1 | NC_024367_p49 | hypothetical protein | phrog_18179 | virion structural protein | head and packaging | -1 | 56508 | 57704 |
| YP_009043755.1 | NC_024367_p75 | hypothetical protein | phrog_23470 | unknown function | unknown function | -1 | 70109 | 70429 |
| YP_009043746.1 | NC_024367_p66 | RNA polymerase subunit | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 67341 | 68540 |
| YP_009043754.1 | NC_024367_p74 | hypothetical protein | phrog_37447 | unknown function | unknown function | -1 | 69993 | 70097 |
| YP_009043756.1 | NC_024367_p76 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 70422 | 71213 |
| YP_009043749.1 | NC_024367_p69 | hypothetical protein | phrog_26997 | unknown function | unknown function | -1 | 68879 | 69163 |
| YP_009044200.1 | NC_024367_p18 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | 1 | 16077 | 17429 |
| YP_009043740.1 | NC_024367_p60 | dCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 63262 | 63750 |
| YP_009043764.1 | NC_024367_p84 | hypothetical protein | phrog_14155 | unknown function | unknown function | -1 | 73741 | 73998 |
| YP_009043703.1 | NC_024367_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33618 | 33761 |
| YP_009043714.1 | NC_024367_p34 | ribonucleoside-diphosphate redutase | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 44401 | 46740 |
| YP_009043750.1 | NC_024367_p70 | hypothetical protein | phrog_13436 | unknown function | unknown function | -1 | 69165 | 69410 |
| YP_009043713.1 | NC_024367_p33 | hypothetical protein | phrog_20171 | unknown function | unknown function | -1 | 43976 | 44335 |
| YP_009043781.1 | NC_024367_p15 | hypothetical protein | phrog_2120 | tail length tape measure protein | tail | 1 | 12377 | 13729 |
| YP_009043766.1 | NC_024367_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 74512 | 74742 |
| YP_009043708.1 | NC_024367_p28 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 38488 | 39483 |
| YP_009043772.1 | NC_024367_p6 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 5104 | 6717 |
| YP_009043770.1 | NC_024367_p4 | hypothetical protein | phrog_13099 | virion structural protein | head and packaging | -1 | 4029 | 4349 |
| YP_009043716.1 | NC_024367_p36 | hypothetical protein | phrog_768 | DprA-like DNA recombination-mediator protein | DNA, RNA and nucleotide metabolism | -1 | 47166 | 47630 |
| YP_009043721.1 | NC_024367_p41 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 48866 | 49171 |
| YP_009043753.1 | NC_024367_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 69810 | 69989 |
| YP_009043779.1 | NC_024367_p13 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 9539 | 11893 |
| YP_009043726.1 | NC_024367_p46 | hypothetical protein | phrog_18048 | unknown function | unknown function | -1 | 54405 | 54635 |
| YP_009043776.1 | NC_024367_p10 | lysis protein | phrog_5867 | endolysin | lysis | 1 | 8365 | 9024 |
| YP_009043767.1 | NC_024367_p1 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 1 | 339 |
| YP_009043733.1 | NC_024367_p53 | hypothetical protein | phrog_20849 | unknown function | unknown function | -1 | 59378 | 59491 |
| YP_009043720.1 | NC_024367_p40 | hypothetical protein | phrog_38738 | unknown function | unknown function | -1 | 48612 | 48890 |
| YP_009043730.1 | NC_024367_p50 | hypothetical protein | phrog_4368 | unknown function | unknown function | -1 | 57721 | 58227 |
| YP_009043702.1 | NC_024367_p22 | virion-encapsulated RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 22757 | 33424 |
| YP_009043768.1 | NC_024367_p2 | hypothetical protein | phrog_6368 | unknown function | unknown function | -1 | 689 | 1663 |
| YP_009043728.1 | NC_024367_p48 | hypothetical protein | phrog_37785 | unknown function | unknown function | -1 | 55642 | 56511 |
| YP_009043722.1 | NC_024367_p42 | RIIB-like protein | phrog_2886 | RIIB lysis inhibitor | lysis | -1 | 49375 | 50805 |
| YP_009043763.1 | NC_024367_p83 | hypothetical protein | phrog_31296 | unknown function | unknown function | -1 | 73299 | 73544 |
| YP_009043777.1 | NC_024367_p11 | hypothetical protein | phrog_18816 | unknown function | unknown function | 1 | 9021 | 9353 |
| YP_009043744.1 | NC_024367_p64 | AAA superfamily ATPase | phrog_1297 | ATPase | other | -1 | 65849 | 67033 |
| YP_009043707.1 | NC_024367_p27 | hypothetical protein | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 36336 | 38495 |
| YP_009043706.1 | NC_024367_p26 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 35589 | 36326 |
| YP_009043705.1 | NC_024367_p25 | single-strand DNA binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 34716 | 35534 |
| YP_009043752.1 | NC_024367_p72 | hypothetical protein | phrog_18488 | unknown function | unknown function | -1 | 69526 | 69810 |
| YP_009043759.1 | NC_024367_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72553 | 72684 |
| YP_009043774.1 | NC_024367_p8 | hypothetical protein | phrog_13075 | unknown function | unknown function | 1 | 7395 | 7802 |
| YP_009043731.1 | NC_024367_p51 | hypothetical protein | phrog_4368 | unknown function | unknown function | -1 | 58231 | 58734 |
| YP_009043741.1 | NC_024367_p61 | hypothetical protein | phrog_8231 | unknown function | unknown function | -1 | 63734 | 64030 |
| YP_009043769.1 | NC_024367_p3 | hypothetical protein | phrog_12736 | virion structural protein | head and packaging | -1 | 1693 | 4029 |
| YP_009043758.1 | NC_024367_p78 | hypothetical protein | phrog_4099 | unknown function | unknown function | -1 | 72086 | 72505 |
| YP_009043727.1 | NC_024367_p47 | hypothetical protein | phrog_6368 | unknown function | unknown function | -1 | 54639 | 55631 |
| YP_009043742.1 | NC_024367_p62 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64032 | 65276 |
| YP_009043760.1 | NC_024367_p80 | hypothetical protein | phrog_35131 | unknown function | unknown function | -1 | 72674 | 72913 |
| YP_009043736.1 | NC_024367_p56 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 60917 | 61903 |
| YP_009043757.1 | NC_024367_p77 | hypothetical protein | phrog_1017 | unknown function | unknown function | -1 | 71210 | 71668 |
| YP_009043780.1 | NC_024367_p14 | hypothetical protein | phrog_2346 | unknown function | unknown function | 1 | 11947 | 12330 |
| YP_009043711.1 | NC_024367_p31 | hypothetical protein | phrog_6035 | unknown function | unknown function | -1 | 42409 | 42714 |
| YP_009043704.1 | NC_024367_p24 | hypothetical protein | phrog_14238 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 33787 | 34719 |
| YP_009043775.1 | NC_024367_p9 | hypothetical protein | phrog_16098 | unknown function | unknown function | 1 | 7799 | 8368 |
| YP_009043735.1 | NC_024367_p55 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 59705 | 60868 |
| YP_009043743.1 | NC_024367_p63 | hypothetical protein | phrog_29075 | unknown function | unknown function | -1 | 65260 | 65844 |