Genomic map of Dinoroseobacter phage DFL12phi1 (NC_024367)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024367
Definition
Dinoroseobacter phage DFL12phi1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Baltimorevirus.
DB of origin
REFSEQ
Length
75028
Host Name
Dinoroseobacter shibae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
49.26
Number of singletons
5
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009043737.1 NC_024367_p57 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 61890 62339
YP_009043724.1 NC_024367_p44 host-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 53510 53827
YP_009043700.1 NC_024367_p20 hypothetical protein phrog_2646 unknown function unknown function 1 20180 20623
YP_009043710.1 NC_024367_p30 hypothetical protein phrog_4848 unknown function unknown function -1 42099 42428
YP_009043734.1 NC_024367_p54 hypothetical protein phrog_1761 unknown function unknown function -1 59491 59718
YP_009043723.1 NC_024367_p43 RIIA-like protein phrog_2979 RIIA lysis inhibitor lysis -1 50828 53380
YP_009043699.1 NC_024367_p19 hypothetical protein phrog_2220 unknown function unknown function 1 17442 20177
YP_009043709.1 NC_024367_p29 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 39480 42095
YP_009043719.1 NC_024367_p39 hypothetical protein phrog_33899 unknown function unknown function -1 48422 48625
YP_009043765.1 NC_024367_p85 hypothetical protein phrog_34203 unknown function unknown function -1 74390 74509
YP_009043745.1 NC_024367_p65 hypothetical protein phrog_12776 unknown function unknown function -1 67078 67296
YP_009043783.1 NC_024367_p17 hypothetical protein phrog_2130 unknown function unknown function 1 15316 16038
YP_009043738.1 NC_024367_p58 hypothetical protein phrog_16467 unknown function unknown function -1 62332 62793
YP_009043751.1 NC_024367_p71 hypothetical protein phrog_28219 unknown function unknown function -1 69407 69529
YP_009043782.1 NC_024367_p16 hypothetical protein phrog_1357 major head protein head and packaging 1 13759 15204
YP_009043778.1 NC_024367_p12 hypothetical protein phrog_32876 unknown function unknown function 1 9382 9528
YP_009043748.1 NC_024367_p68 hypothetical protein phrog_14069 unknown function unknown function -1 68698 68895
YP_009043732.1 NC_024367_p52 hypothetical protein phrog_1627 unknown function unknown function -1 58731 59060
YP_009043773.1 NC_024367_p7 hypothetical protein phrog_2125 virion structural protein head and packaging 1 6727 7395
YP_009043718.1 NC_024367_p38 hypothetical protein phrog_2072 unknown function unknown function -1 47991 48425
YP_009043701.1 NC_024367_p21 hypothetical protein phrog_14527 unknown function unknown function 1 20634 22691
YP_009043715.1 NC_024367_p35 hypothetical protein phrog_14950 unknown function unknown function -1 46813 47169
YP_009043762.1 NC_024367_p82 hypothetical protein phrog_28829 unknown function unknown function -1 73162 73302
YP_009043739.1 NC_024367_p59 hypothetical protein phrog_20493 unknown function unknown function -1 63002 63265
YP_009043747.1 NC_024367_p67 hypothetical protein singleton unknown function unknown function -1 68534 68701
YP_009043717.1 NC_024367_p37 hypothetical protein phrog_9905 unknown function unknown function -1 47701 47994
YP_009043725.1 NC_024367_p45 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 53808 54350
YP_009043761.1 NC_024367_p81 hypothetical protein phrog_35558 unknown function unknown function -1 72930 73178
YP_009043712.1 NC_024367_p32 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 42711 43988
YP_009043771.1 NC_024367_p5 hypothetical protein phrog_2109 unknown function unknown function 1 4422 5111
YP_009043729.1 NC_024367_p49 hypothetical protein phrog_18179 virion structural protein head and packaging -1 56508 57704
YP_009043755.1 NC_024367_p75 hypothetical protein phrog_23470 unknown function unknown function -1 70109 70429
YP_009043746.1 NC_024367_p66 RNA polymerase subunit phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism -1 67341 68540
YP_009043754.1 NC_024367_p74 hypothetical protein phrog_37447 unknown function unknown function -1 69993 70097
YP_009043756.1 NC_024367_p76 hypothetical protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism -1 70422 71213
YP_009043749.1 NC_024367_p69 hypothetical protein phrog_26997 unknown function unknown function -1 68879 69163
YP_009044200.1 NC_024367_p18 hypothetical protein phrog_2050 virion structural protein head and packaging 1 16077 17429
YP_009043740.1 NC_024367_p60 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism -1 63262 63750
YP_009043764.1 NC_024367_p84 hypothetical protein phrog_14155 unknown function unknown function -1 73741 73998
YP_009043703.1 NC_024367_p23 hypothetical protein singleton unknown function unknown function -1 33618 33761
YP_009043714.1 NC_024367_p34 ribonucleoside-diphosphate redutase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 44401 46740
YP_009043750.1 NC_024367_p70 hypothetical protein phrog_13436 unknown function unknown function -1 69165 69410
YP_009043713.1 NC_024367_p33 hypothetical protein phrog_20171 unknown function unknown function -1 43976 44335
YP_009043781.1 NC_024367_p15 hypothetical protein phrog_2120 tail length tape measure protein tail 1 12377 13729
YP_009043766.1 NC_024367_p86 hypothetical protein singleton unknown function unknown function -1 74512 74742
YP_009043708.1 NC_024367_p28 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism -1 38488 39483
YP_009043772.1 NC_024367_p6 hypothetical protein phrog_38 terminase large subunit head and packaging 1 5104 6717
YP_009043770.1 NC_024367_p4 hypothetical protein phrog_13099 virion structural protein head and packaging -1 4029 4349
YP_009043716.1 NC_024367_p36 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 47166 47630
YP_009043721.1 NC_024367_p41 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism -1 48866 49171
YP_009043753.1 NC_024367_p73 hypothetical protein singleton unknown function unknown function -1 69810 69989
YP_009043779.1 NC_024367_p13 portal protein phrog_1216 portal protein head and packaging 1 9539 11893
YP_009043726.1 NC_024367_p46 hypothetical protein phrog_18048 unknown function unknown function -1 54405 54635
YP_009043776.1 NC_024367_p10 lysis protein phrog_5867 endolysin lysis 1 8365 9024
YP_009043767.1 NC_024367_p1 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 1 339
YP_009043733.1 NC_024367_p53 hypothetical protein phrog_20849 unknown function unknown function -1 59378 59491
YP_009043720.1 NC_024367_p40 hypothetical protein phrog_38738 unknown function unknown function -1 48612 48890
YP_009043730.1 NC_024367_p50 hypothetical protein phrog_4368 unknown function unknown function -1 57721 58227
YP_009043702.1 NC_024367_p22 virion-encapsulated RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism 1 22757 33424
YP_009043768.1 NC_024367_p2 hypothetical protein phrog_6368 unknown function unknown function -1 689 1663
YP_009043728.1 NC_024367_p48 hypothetical protein phrog_37785 unknown function unknown function -1 55642 56511
YP_009043722.1 NC_024367_p42 RIIB-like protein phrog_2886 RIIB lysis inhibitor lysis -1 49375 50805
YP_009043763.1 NC_024367_p83 hypothetical protein phrog_31296 unknown function unknown function -1 73299 73544
YP_009043777.1 NC_024367_p11 hypothetical protein phrog_18816 unknown function unknown function 1 9021 9353
YP_009043744.1 NC_024367_p64 AAA superfamily ATPase phrog_1297 ATPase other -1 65849 67033
YP_009043707.1 NC_024367_p27 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism -1 36336 38495
YP_009043706.1 NC_024367_p26 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 35589 36326
YP_009043705.1 NC_024367_p25 single-strand DNA binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 34716 35534
YP_009043752.1 NC_024367_p72 hypothetical protein phrog_18488 unknown function unknown function -1 69526 69810
YP_009043759.1 NC_024367_p79 hypothetical protein singleton unknown function unknown function -1 72553 72684
YP_009043774.1 NC_024367_p8 hypothetical protein phrog_13075 unknown function unknown function 1 7395 7802
YP_009043731.1 NC_024367_p51 hypothetical protein phrog_4368 unknown function unknown function -1 58231 58734
YP_009043741.1 NC_024367_p61 hypothetical protein phrog_8231 unknown function unknown function -1 63734 64030
YP_009043769.1 NC_024367_p3 hypothetical protein phrog_12736 virion structural protein head and packaging -1 1693 4029
YP_009043758.1 NC_024367_p78 hypothetical protein phrog_4099 unknown function unknown function -1 72086 72505
YP_009043727.1 NC_024367_p47 hypothetical protein phrog_6368 unknown function unknown function -1 54639 55631
YP_009043742.1 NC_024367_p62 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64032 65276
YP_009043760.1 NC_024367_p80 hypothetical protein phrog_35131 unknown function unknown function -1 72674 72913
YP_009043736.1 NC_024367_p56 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 60917 61903
YP_009043757.1 NC_024367_p77 hypothetical protein phrog_1017 unknown function unknown function -1 71210 71668
YP_009043780.1 NC_024367_p14 hypothetical protein phrog_2346 unknown function unknown function 1 11947 12330
YP_009043711.1 NC_024367_p31 hypothetical protein phrog_6035 unknown function unknown function -1 42409 42714
YP_009043704.1 NC_024367_p24 hypothetical protein phrog_14238 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 33787 34719
YP_009043775.1 NC_024367_p9 hypothetical protein phrog_16098 unknown function unknown function 1 7799 8368
YP_009043735.1 NC_024367_p55 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 59705 60868
YP_009043743.1 NC_024367_p63 hypothetical protein phrog_29075 unknown function unknown function -1 65260 65844