Genomic map of Mycobacterium phage Damien (NC_024371)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024371
Definition
Mycobacterium phage Damien, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
68386
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
93
%GC
57.6
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009044002.1 NC_024371_p13 hypothetical protein phrog_4866 head scaffolding protein head and packaging 1 8913 9674
YP_009044010.1 NC_024371_p21 hypothetical protein phrog_12447 unknown function unknown function 1 13866 14192
YP_009044046.1 NC_024371_p57 hypothetical protein singleton unknown function unknown function 1 44418 44600
YP_009044047.1 NC_024371_p58 hypothetical protein singleton unknown function unknown function 1 44784 45146
YP_009043994.1 NC_024371_p5 portal protein phrog_64 portal protein head and packaging 1 3872 5485
YP_009043990.1 NC_024371_p1 hypothetical protein phrog_5460 unknown function unknown function 1 1 348
YP_009044031.1 NC_024371_p42 hypothetical protein phrog_8253 unknown function unknown function 1 37764 38033
YP_009044069.1 NC_024371_p80 hypothetical protein phrog_16155 unknown function unknown function 1 60274 60525
YP_009044032.1 NC_024371_p43 hypothetical protein phrog_16702 unknown function unknown function 1 38126 38485
YP_009044000.1 NC_024371_p11 major capsid protein phrog_5556 tail protein tail 1 7512 7970
YP_009044055.1 NC_024371_p66 hypothetical protein phrog_18085 unknown function unknown function 1 49739 50086
YP_009044011.1 NC_024371_p22 hypothetical protein phrog_5278 unknown function unknown function 1 14212 14409
YP_009044062.1 NC_024371_p73 hypothetical protein phrog_12070 unknown function unknown function 1 53725 54345
YP_009044082.1 NC_024371_p93 hypothetical protein singleton unknown function unknown function 1 67618 67845
YP_009044003.1 NC_024371_p14 hypothetical protein phrog_5042 unknown function unknown function 1 9778 10284
YP_009044078.1 NC_024371_p89 hypothetical protein phrog_18727 unknown function unknown function 1 63741 64091
YP_009044073.1 NC_024371_p84 hypothetical protein phrog_15815 unknown function unknown function 1 61416 61991
YP_009044005.1 NC_024371_p16 hypothetical protein phrog_5318 unknown function unknown function 1 11628 12239
YP_009044065.1 NC_024371_p76 hypothetical protein phrog_1342 unknown function unknown function 1 55083 55472
YP_009044077.1 NC_024371_p88 hypothetical protein phrog_17566 unknown function unknown function 1 63319 63723
YP_009044024.1 NC_024371_p35 holin phrog_565 holin lysis 1 32383 32844
YP_009044048.1 NC_024371_p59 hypothetical protein phrog_12472 unknown function unknown function 1 45151 45462
YP_009043992.1 NC_024371_p3 hypothetical protein phrog_12672 unknown function unknown function 1 1682 1930
YP_009044056.1 NC_024371_p67 nuclease phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 50083 51372
YP_009044049.1 NC_024371_p60 hypothetical protein phrog_5307 unknown function unknown function 1 45459 46025
YP_009044063.1 NC_024371_p74 hypothetical protein phrog_15802 unknown function unknown function 1 54569 54796
YP_009043998.1 NC_024371_p9 hypothetical protein phrog_16007 unknown function unknown function 1 6442 6738
YP_009043995.1 NC_024371_p6 hypothetical protein phrog_1375 unknown function unknown function 1 5716 5916
YP_009044027.1 NC_024371_p38 lysin B phrog_102 endolysin lysis 1 33838 35079
YP_009044061.1 NC_024371_p72 AAA-ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 52565 53644
YP_009043993.1 NC_024371_p4 terminase phrog_2 terminase large subunit head and packaging 1 2133 3842
YP_009044053.1 NC_024371_p64 hypothetical protein phrog_12020 unknown function unknown function 1 48891 49436
YP_009044019.1 NC_024371_p30 minor tail protein/D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 28525 29733
YP_009044026.1 NC_024371_p37 hypothetical protein phrog_726 unknown function unknown function 1 33339 33854
YP_009043999.1 NC_024371_p10 capsid maturation protease phrog_12708 head maturation protease head and packaging 1 6735 7508
YP_009044043.1 NC_024371_p54 hypothetical protein phrog_1221 unknown function unknown function 1 42670 43899
YP_009044018.1 NC_024371_p29 minor tail protein phrog_346 minor tail protein tail 1 25682 28525
YP_009044080.1 NC_024371_p91 hypothetical protein phrog_18975 unknown function unknown function 1 64361 64681
YP_009044054.1 NC_024371_p65 hypothetical protein phrog_18821 unknown function unknown function 1 49614 49742
YP_009044015.1 NC_024371_p26 tapemeasure protein phrog_6435 tail length tape measure protein tail 1 16235 22558
YP_009044033.1 NC_024371_p44 hypothetical protein phrog_19599 unknown function unknown function 1 38582 38968
YP_009044039.1 NC_024371_p50 hypothetical protein phrog_17421 unknown function unknown function 1 40892 41278
YP_009044040.1 NC_024371_p51 hypothetical protein phrog_16414 unknown function unknown function 1 41416 41742
YP_009044071.1 NC_024371_p82 hypothetical protein phrog_17654 unknown function unknown function 1 60815 61147
YP_009044041.1 NC_024371_p52 hypothetical protein phrog_17169 unknown function unknown function 1 41780 42103
YP_009044030.1 NC_024371_p41 hypothetical protein phrog_636 unknown function unknown function 1 37011 37643
YP_009044008.1 NC_024371_p19 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 13001 13363
YP_009044052.1 NC_024371_p63 hypothetical protein phrog_17402 membrane protein moron, auxiliary metabolic gene and host takeover 1 48373 48744
YP_009044022.1 NC_024371_p33 hypothetical protein phrog_12784 unknown function unknown function 1 31136 31336
YP_009044070.1 NC_024371_p81 hypothetical protein phrog_19237 membrane protein moron, auxiliary metabolic gene and host takeover 1 60522 60818
YP_009044016.1 NC_024371_p27 minor tail protein phrog_7161 minor tail protein tail 1 22555 24057
YP_009044004.1 NC_024371_p15 hypothetical protein phrog_3990 major head protein head and packaging 1 10335 11558
YP_009044060.1 NC_024371_p71 hypothetical protein phrog_549 unknown function unknown function 1 52144 52533
YP_009044066.1 NC_024371_p77 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 55598 58798
YP_009044075.1 NC_024371_p86 hypothetical protein phrog_16806 unknown function unknown function 1 62367 63032
YP_009044074.1 NC_024371_p85 hypothetical protein phrog_3848 unknown function unknown function 1 61997 62365
YP_009043996.1 NC_024371_p7 hypothetical protein phrog_24240 unknown function unknown function 1 5925 6110
YP_009044021.1 NC_024371_p32 hypothetical protein phrog_644 unknown function unknown function 1 30712 31119
YP_009044042.1 NC_024371_p53 hypothetical protein phrog_18114 unknown function unknown function 1 42106 42540
YP_009044067.1 NC_024371_p78 hypothetical protein phrog_17115 unknown function unknown function 1 58810 59427
YP_009044012.1 NC_024371_p23 hypothetical protein phrog_4971 major tail protein tail 1 14426 15274
YP_009044072.1 NC_024371_p83 hypothetical protein phrog_14975 unknown function unknown function 1 61144 61419
YP_009044017.1 NC_024371_p28 minor tail protein phrog_1885 minor tail protein tail 1 24054 25682
YP_009044013.1 NC_024371_p24 tail assembly chaperone phrog_4336 tail assembly chaperone tail 1 15370 15915
YP_009044057.1 NC_024371_p68 hypothetical protein phrog_21624 unknown function unknown function 1 51369 51683
YP_009044081.1 NC_024371_p92 primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 64671 67616
YP_009044038.1 NC_024371_p49 hypothetical protein phrog_21085 unknown function unknown function 1 40439 40795
YP_009044034.1 NC_024371_p45 hypothetical protein phrog_12994 unknown function unknown function 1 38971 39243
YP_009044014.1 NC_024371_p25 tail assembly chaperone phrog_6778 tail assembly chaperone tail 1 15884 16216
YP_009044045.1 NC_024371_p56 hypothetical protein phrog_19761 membrane protein moron, auxiliary metabolic gene and host takeover 1 44173 44373
YP_009044044.1 NC_024371_p55 hypothetical protein phrog_5326 unknown function unknown function 1 44000 44176
YP_009043991.1 NC_024371_p2 hypothetical protein phrog_10899 terminase small subunit head and packaging 1 355 1668
YP_009044035.1 NC_024371_p46 hypothetical protein phrog_19432 unknown function unknown function 1 39341 39736
YP_009044006.1 NC_024371_p17 hypothetical protein phrog_5274 unknown function unknown function 1 12246 12623
YP_009044020.1 NC_024371_p31 minor tail protein phrog_553 minor tail protein tail 1 29730 30698
YP_009044007.1 NC_024371_p18 hypothetical protein phrog_4904 unknown function unknown function 1 12625 13008
YP_009044059.1 NC_024371_p70 hypothetical protein phrog_20994 membrane protein moron, auxiliary metabolic gene and host takeover 1 51838 52101
YP_009044009.1 NC_024371_p20 hypothetical protein phrog_4995 unknown function unknown function 1 13360 13827
YP_009044068.1 NC_024371_p79 hypothetical protein phrog_1981 unknown function unknown function 1 59427 60179
YP_009043997.1 NC_024371_p8 hypothetical protein phrog_19343 membrane protein moron, auxiliary metabolic gene and host takeover 1 6110 6442
YP_009044025.1 NC_024371_p36 hypothetical protein phrog_1298 minor tail protein tail 1 32876 33355
YP_009044001.1 NC_024371_p12 hypothetical protein phrog_115 minor head protein head and packaging 1 7967 8887
YP_009044023.1 NC_024371_p34 lysin A phrog_1512 endolysin lysis 1 31406 32371
YP_009044036.1 NC_024371_p47 hypothetical protein phrog_21012 unknown function unknown function 1 39822 40007
YP_009044079.1 NC_024371_p90 hypothetical protein phrog_30302 unknown function unknown function 1 64281 64406
YP_009044028.1 NC_024371_p39 hypothetical protein phrog_10981 unknown function unknown function 1 35089 35451
YP_009044076.1 NC_024371_p87 hypothetical protein phrog_17433 unknown function unknown function 1 63029 63319
YP_009044050.1 NC_024371_p61 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 46053 48110
YP_009044064.1 NC_024371_p75 hypothetical protein phrog_15225 unknown function unknown function 1 54793 55086
YP_009044051.1 NC_024371_p62 hypothetical protein phrog_13855 unknown function unknown function 1 48107 48376
YP_009044037.1 NC_024371_p48 hypothetical protein phrog_1587 unknown function unknown function 1 40101 40436
YP_009044058.1 NC_024371_p69 hypothetical protein phrog_19475 unknown function unknown function 1 51680 51841
YP_009044029.1 NC_024371_p40 hypothetical protein singleton unknown function unknown function 1 35562 35759