| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024375 |
Definition |
Listeria phage LP-026, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus. |
DB of origin |
REFSEQ |
Length |
67150 |
Host Name |
Listeria monocytogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
114 |
%GC |
36.25 |
Number of singletons |
2 |
Number of paralogs |
8 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009044094.1 | NC_024375_p9 | hypothetical protein | phrog_32383 | unknown function | unknown function | 1 | 3494 | 3655 |
| YP_009044180.1 | NC_024375_p95 | DUF2479 domain-containing protein | phrog_18602 | virion structural protein | head and packaging | 1 | 46465 | 47904 |
| YP_009044108.1 | NC_024375_p23 | hypothetical protein | phrog_18507 | unknown function | unknown function | 1 | 14372 | 14782 |
| YP_009044191.1 | NC_024375_p106 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 56260 | 56619 |
| YP_009044141.1 | NC_024375_p56 | hypothetical protein | phrog_18105 | unknown function | unknown function | 1 | 29261 | 29548 |
| YP_009044126.1 | NC_024375_p41 | hypothetical protein | phrog_31463 | unknown function | unknown function | 1 | 22895 | 23356 |
| YP_009044133.1 | NC_024375_p48 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25480 | 25998 |
| YP_009044140.1 | NC_024375_p55 | hypothetical protein | phrog_7822 | unknown function | unknown function | 1 | 28795 | 29250 |
| YP_009044187.1 | NC_024375_p102 | DUF4355 domain-containing protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 53450 | 54091 |
| YP_009044198.1 | NC_024375_p113 | tail tape measure protein | phrog_1533 | tail length tape measure protein | tail | 1 | 59743 | 62655 |
| YP_009044127.1 | NC_024375_p42 | hypothetical protein | phrog_18681 | unknown function | unknown function | 1 | 23422 | 23604 |
| YP_009044182.1 | NC_024375_p97 | holin | phrog_297 | holin | lysis | 1 | 48263 | 48547 |
| YP_009044142.1 | NC_024375_p57 | LPXTG cell wall anchor domain-containing protein | phrog_16892 | unknown function | unknown function | 1 | 29609 | 30445 |
| YP_009044146.1 | NC_024375_p61 | hypothetical protein | phrog_34951 | unknown function | unknown function | -1 | 32277 | 32420 |
| YP_009044161.1 | NC_024375_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38853 | 39017 |
| YP_009044145.1 | NC_024375_p60 | hypothetical protein | phrog_17121 | unknown function | unknown function | -1 | 32067 | 32261 |
| YP_009044114.1 | NC_024375_p29 | hypothetical protein | phrog_7005 | unknown function | unknown function | 1 | 17446 | 18357 |
| YP_009044130.1 | NC_024375_p45 | hypothetical protein | phrog_7296 | unknown function | unknown function | 1 | 24098 | 24619 |
| YP_009044159.1 | NC_024375_p74 | hypothetical protein | phrog_2316 | unknown function | unknown function | -1 | 36463 | 36759 |
| YP_009044092.1 | NC_024375_p7 | hypothetical protein | phrog_17927 | unknown function | unknown function | -1 | 2243 | 2761 |
| YP_009044102.1 | NC_024375_p17 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 9221 | 11317 |
| YP_009044137.1 | NC_024375_p52 | hypothetical protein | phrog_16753 | unknown function | unknown function | 1 | 27880 | 28173 |
| YP_009044185.1 | NC_024375_p100 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 50939 | 52588 |
| YP_009044151.1 | NC_024375_p66 | DUF1642 domain-containing protein | phrog_121 | unknown function | unknown function | -1 | 33558 | 34193 |
| YP_009044138.1 | NC_024375_p53 | hypothetical protein | phrog_17278 | unknown function | unknown function | 1 | 28173 | 28373 |
| YP_009044165.1 | NC_024375_p80 | hypothetical protein | phrog_18373 | unknown function | unknown function | -1 | 40189 | 40398 |
| YP_009044101.1 | NC_024375_p16 | hypothetical protein | phrog_17905 | methyltransferase | other | 1 | 8623 | 9069 |
| YP_009044086.1 | NC_024375_p1 | minor structural protein | phrog_17797 | tail protein | tail | 1 | 1 | 2 |
| YP_009044086.1 | NC_024375_p1 | minor structural protein | phrog_17797 | tail protein | tail | 1 | 64762 | 67150 |
| YP_009044164.1 | NC_024375_p79 | hypothetical protein | phrog_18191 | unknown function | unknown function | -1 | 39907 | 40176 |
| YP_009044113.1 | NC_024375_p28 | AAA_5 domain-containing protein | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 16405 | 17427 |
| YP_009044090.1 | NC_024375_p5 | hypothetical protein | phrog_6883 | unknown function | unknown function | -1 | 1289 | 1996 |
| YP_009044123.1 | NC_024375_p38 | hypothetical protein | phrog_17753 | unknown function | unknown function | 1 | 21777 | 22238 |
| YP_009044170.1 | NC_024375_p85 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 41444 | 41689 |
| YP_009044136.1 | NC_024375_p51 | hypothetical protein | phrog_8573 | unknown function | unknown function | 1 | 27583 | 27867 |
| YP_009044188.1 | NC_024375_p103 | major capsid protein | phrog_544 | major head protein | head and packaging | 1 | 54122 | 55027 |
| YP_009044119.1 | NC_024375_p34 | hypothetical protein | phrog_18431 | unknown function | unknown function | 1 | 19797 | 20585 |
| YP_009044143.1 | NC_024375_p58 | hypothetical protein | phrog_18690 | unknown function | unknown function | 1 | 30580 | 30879 |
| YP_009044118.1 | NC_024375_p33 | hypothetical protein | phrog_17097 | unknown function | unknown function | 1 | 19575 | 19736 |
| YP_009044150.1 | NC_024375_p65 | DUF1642 domain-containing protein | phrog_26006 | unknown function | unknown function | -1 | 33349 | 33558 |
| YP_009044149.1 | NC_024375_p64 | hypothetical protein | phrog_17830 | unknown function | unknown function | -1 | 33209 | 33352 |
| YP_009044107.1 | NC_024375_p22 | sigma factor | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 14047 | 14412 |
| YP_009044144.1 | NC_024375_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31280 | 31375 |
| YP_009044167.1 | NC_024375_p82 | hypothetical protein | phrog_20334 | unknown function | unknown function | -1 | 40602 | 40865 |
| YP_009044087.1 | NC_024375_p2 | hypothetical protein | phrog_7571 | unknown function | unknown function | -1 | 522 | 722 |
| YP_009044158.1 | NC_024375_p73 | His-Me finger endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36088 | 36399 |
| YP_009044173.1 | NC_024375_p88 | hypothetical protein | phrog_10628 | unknown function | unknown function | -1 | 42152 | 42403 |
| YP_009044169.1 | NC_024375_p84 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 41164 | 41487 |
| YP_009044131.1 | NC_024375_p46 | hypothetical protein | phrog_7296 | unknown function | unknown function | 1 | 24633 | 25178 |
| YP_009044117.1 | NC_024375_p32 | hypothetical protein | phrog_18570 | unknown function | unknown function | 1 | 19301 | 19534 |
| YP_009044183.1 | NC_024375_p98 | endolysin | phrog_5115 | ferredoxin | moron, auxiliary metabolic gene and host takeover | 1 | 48547 | 49494 |
| YP_009044093.1 | NC_024375_p8 | radical SAM domain-containing protein | phrog_17662 | unknown function | unknown function | -1 | 2758 | 3411 |
| YP_009044135.1 | NC_024375_p50 | hypothetical protein | phrog_17663 | unknown function | unknown function | 1 | 27152 | 27484 |
| YP_009044184.1 | NC_024375_p99 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 49563 | 50906 |
| YP_009044177.1 | NC_024375_p92 | hypothetical protein | phrog_17111 | unknown function | unknown function | -1 | 43339 | 43725 |
| YP_009044115.1 | NC_024375_p30 | hypothetical protein | phrog_18040 | unknown function | unknown function | 1 | 18358 | 18624 |
| YP_009044168.1 | NC_024375_p83 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 40913 | 41164 |
| YP_009044162.1 | NC_024375_p77 | hypothetical protein | phrog_1384 | Mom-like DNA modification protein | other | -1 | 39064 | 39717 |
| YP_009044156.1 | NC_024375_p71 | hypothetical protein | phrog_6406 | unknown function | unknown function | -1 | 35679 | 35909 |
| YP_009044154.1 | NC_024375_p69 | hypothetical protein | phrog_20947 | unknown function | unknown function | -1 | 34863 | 35357 |
| YP_009044134.1 | NC_024375_p49 | hypothetical protein | phrog_18584 | unknown function | unknown function | 1 | 26816 | 27049 |
| YP_009044189.1 | NC_024375_p104 | hypothetical protein | phrog_17541 | unknown function | unknown function | 1 | 55093 | 55290 |
| YP_009044166.1 | NC_024375_p81 | hypothetical protein | phrog_17919 | unknown function | unknown function | -1 | 40412 | 40615 |
| YP_009044095.1 | NC_024375_p10 | hypothetical protein | phrog_18039 | unknown function | unknown function | -1 | 4000 | 4200 |
| YP_009044098.1 | NC_024375_p13 | DNA replication protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 5467 | 6249 |
| YP_009044128.1 | NC_024375_p43 | hypothetical protein | phrog_10844 | unknown function | unknown function | 1 | 23610 | 23894 |
| YP_009044132.1 | NC_024375_p47 | hypothetical protein | phrog_17786 | unknown function | unknown function | 1 | 25175 | 25483 |
| YP_009044157.1 | NC_024375_p72 | hypothetical protein | phrog_21953 | unknown function | unknown function | -1 | 35902 | 36078 |
| YP_009044089.1 | NC_024375_p4 | hypothetical protein | phrog_18550 | unknown function | unknown function | -1 | 1076 | 1276 |
| YP_009044175.1 | NC_024375_p90 | hypothetical protein | phrog_10628 | unknown function | unknown function | -1 | 42661 | 42897 |
| YP_009044099.1 | NC_024375_p14 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 6250 | 7578 |
| YP_009044172.1 | NC_024375_p87 | hypothetical protein | phrog_10526 | unknown function | unknown function | -1 | 41922 | 42149 |
| YP_009044153.1 | NC_024375_p68 | hypothetical protein | phrog_1666 | unknown function | unknown function | -1 | 34604 | 34861 |
| YP_009044195.1 | NC_024375_p110 | major tail protein | phrog_41 | major tail protein | tail | 1 | 57839 | 58549 |
| YP_009044116.1 | NC_024375_p31 | hypothetical protein | phrog_17535 | unknown function | unknown function | 1 | 18617 | 19297 |
| YP_009044193.1 | NC_024375_p108 | hypothetical protein | phrog_17081 | unknown function | unknown function | 1 | 57010 | 57396 |
| YP_009044147.1 | NC_024375_p62 | hypothetical protein | phrog_16767 | unknown function | unknown function | -1 | 32462 | 32647 |
| YP_009044163.1 | NC_024375_p78 | hypothetical protein | phrog_18055 | unknown function | unknown function | -1 | 39714 | 39923 |
| YP_009044178.1 | NC_024375_p93 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 44051 | 44551 |
| YP_009044106.1 | NC_024375_p21 | P-loop containing nucleoside triphosphate hydrolase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 13521 | 14069 |
| YP_009044152.1 | NC_024375_p67 | hypothetical protein | phrog_19990 | unknown function | unknown function | -1 | 34277 | 34441 |
| YP_009044190.1 | NC_024375_p105 | fibronectin type III domain-containing protein | phrog_18435 | unknown function | unknown function | 1 | 55304 | 56182 |
| YP_009044124.1 | NC_024375_p39 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 22238 | 22504 |
| YP_009044148.1 | NC_024375_p63 | hypothetical protein | phrog_16663 | unknown function | unknown function | -1 | 32637 | 33194 |
| YP_009044155.1 | NC_024375_p70 | hypothetical protein | phrog_18615 | unknown function | unknown function | -1 | 35357 | 35635 |
| YP_009044104.1 | NC_024375_p19 | hypothetical protein | phrog_1706 | CRISPR/Cas system associated | DNA, RNA and nucleotide metabolism | 1 | 11985 | 13010 |
| YP_009044197.1 | NC_024375_p112 | hypothetical protein | phrog_17465 | unknown function | unknown function | 1 | 59000 | 59743 |
| YP_009044179.1 | NC_024375_p94 | DUF2479 domain-containing protein | phrog_3639 | minor tail protein | tail | 1 | 44554 | 46452 |
| YP_009044129.1 | NC_024375_p44 | hypothetical protein | phrog_6414 | unknown function | unknown function | 1 | 23897 | 24088 |
| YP_009044160.1 | NC_024375_p75 | hypothetical protein | phrog_17911 | unknown function | unknown function | -1 | 36780 | 37025 |
| YP_009044088.1 | NC_024375_p3 | hypothetical protein | phrog_17281 | unknown function | unknown function | -1 | 715 | 1086 |
| YP_009044176.1 | NC_024375_p91 | hypothetical protein | phrog_17491 | unknown function | unknown function | -1 | 42887 | 43330 |
| YP_009044097.1 | NC_024375_p12 | hypothetical protein | phrog_6154 | unknown function | unknown function | 1 | 5065 | 5448 |
| YP_009044174.1 | NC_024375_p89 | hypothetical protein | phrog_17836 | unknown function | unknown function | -1 | 42415 | 42648 |
| YP_009044171.1 | NC_024375_p86 | hypothetical protein | phrog_10526 | unknown function | unknown function | -1 | 41686 | 41919 |
| YP_009044091.1 | NC_024375_p6 | hypothetical protein | phrog_35832 | unknown function | unknown function | 1 | 1997 | 2272 |
| YP_009044109.1 | NC_024375_p24 | hypothetical protein | phrog_18628 | unknown function | unknown function | 1 | 14875 | 15561 |
| YP_009044103.1 | NC_024375_p18 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11373 | 11984 |
| YP_009044120.1 | NC_024375_p35 | hypothetical protein | phrog_21823 | unknown function | unknown function | 1 | 20572 | 20799 |
| YP_009044196.1 | NC_024375_p111 | hypothetical protein | phrog_18667 | unknown function | unknown function | 1 | 58629 | 58937 |
| YP_009044121.1 | NC_024375_p36 | hypothetical protein | phrog_17084 | unknown function | unknown function | 1 | 20881 | 21360 |
| YP_009044110.1 | NC_024375_p25 | hypothetical protein | phrog_17749 | unknown function | unknown function | 1 | 15577 | 15801 |
| YP_009044112.1 | NC_024375_p27 | hypothetical protein | phrog_17709 | unknown function | unknown function | 1 | 16105 | 16383 |
| YP_009044192.1 | NC_024375_p107 | hypothetical protein | phrog_16721 | unknown function | unknown function | 1 | 56616 | 57032 |
| YP_009044100.1 | NC_024375_p15 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 7655 | 8620 |
| YP_009044199.1 | NC_024375_p114 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 62660 | 64750 |
| YP_009044194.1 | NC_024375_p109 | DUF3168 domain-containing protein | phrog_176 | tail terminator | connector | 1 | 57396 | 57815 |
| YP_009044096.1 | NC_024375_p11 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4506 | 5009 |
| YP_009044186.1 | NC_024375_p101 | capsid morphogenesis protein | phrog_8089 | head morphogenesis | head and packaging | 1 | 52595 | 53380 |
| YP_009044111.1 | NC_024375_p26 | hypothetical protein | phrog_19802 | unknown function | unknown function | 1 | 15794 | 16030 |
| YP_009044122.1 | NC_024375_p37 | hypothetical protein | phrog_17542 | unknown function | unknown function | 1 | 21350 | 21784 |
| YP_009044125.1 | NC_024375_p40 | hypothetical protein | phrog_18081 | unknown function | unknown function | 1 | 22497 | 22826 |
| YP_009044105.1 | NC_024375_p20 | crossover junction endodeoxyribonuclease | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 13007 | 13519 |
| YP_009044139.1 | NC_024375_p54 | hypothetical protein | phrog_4264 | unknown function | unknown function | 1 | 28385 | 28732 |
| YP_009044181.1 | NC_024375_p96 | hypothetical protein | phrog_1009 | unknown function | unknown function | 1 | 47916 | 48266 |