Genomic map of Listeria phage LP-026 (NC_024375)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024375
Definition
Listeria phage LP-026, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus.
DB of origin
REFSEQ
Length
67150
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
114
%GC
36.25
Number of singletons
2
Number of paralogs
8

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009044094.1 NC_024375_p9 hypothetical protein phrog_32383 unknown function unknown function 1 3494 3655
YP_009044180.1 NC_024375_p95 DUF2479 domain-containing protein phrog_18602 virion structural protein head and packaging 1 46465 47904
YP_009044108.1 NC_024375_p23 hypothetical protein phrog_18507 unknown function unknown function 1 14372 14782
YP_009044191.1 NC_024375_p106 hypothetical protein phrog_132 head-tail adaptor connector 1 56260 56619
YP_009044141.1 NC_024375_p56 hypothetical protein phrog_18105 unknown function unknown function 1 29261 29548
YP_009044126.1 NC_024375_p41 hypothetical protein phrog_31463 unknown function unknown function 1 22895 23356
YP_009044133.1 NC_024375_p48 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25480 25998
YP_009044140.1 NC_024375_p55 hypothetical protein phrog_7822 unknown function unknown function 1 28795 29250
YP_009044187.1 NC_024375_p102 DUF4355 domain-containing protein phrog_172 head scaffolding protein head and packaging 1 53450 54091
YP_009044198.1 NC_024375_p113 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 59743 62655
YP_009044127.1 NC_024375_p42 hypothetical protein phrog_18681 unknown function unknown function 1 23422 23604
YP_009044182.1 NC_024375_p97 holin phrog_297 holin lysis 1 48263 48547
YP_009044142.1 NC_024375_p57 LPXTG cell wall anchor domain-containing protein phrog_16892 unknown function unknown function 1 29609 30445
YP_009044146.1 NC_024375_p61 hypothetical protein phrog_34951 unknown function unknown function -1 32277 32420
YP_009044161.1 NC_024375_p76 hypothetical protein singleton unknown function unknown function -1 38853 39017
YP_009044145.1 NC_024375_p60 hypothetical protein phrog_17121 unknown function unknown function -1 32067 32261
YP_009044114.1 NC_024375_p29 hypothetical protein phrog_7005 unknown function unknown function 1 17446 18357
YP_009044130.1 NC_024375_p45 hypothetical protein phrog_7296 unknown function unknown function 1 24098 24619
YP_009044159.1 NC_024375_p74 hypothetical protein phrog_2316 unknown function unknown function -1 36463 36759
YP_009044092.1 NC_024375_p7 hypothetical protein phrog_17927 unknown function unknown function -1 2243 2761
YP_009044102.1 NC_024375_p17 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9221 11317
YP_009044137.1 NC_024375_p52 hypothetical protein phrog_16753 unknown function unknown function 1 27880 28173
YP_009044185.1 NC_024375_p100 portal protein phrog_64 portal protein head and packaging 1 50939 52588
YP_009044151.1 NC_024375_p66 DUF1642 domain-containing protein phrog_121 unknown function unknown function -1 33558 34193
YP_009044138.1 NC_024375_p53 hypothetical protein phrog_17278 unknown function unknown function 1 28173 28373
YP_009044165.1 NC_024375_p80 hypothetical protein phrog_18373 unknown function unknown function -1 40189 40398
YP_009044101.1 NC_024375_p16 hypothetical protein phrog_17905 methyltransferase other 1 8623 9069
YP_009044086.1 NC_024375_p1 minor structural protein phrog_17797 tail protein tail 1 1 2
YP_009044086.1 NC_024375_p1 minor structural protein phrog_17797 tail protein tail 1 64762 67150
YP_009044164.1 NC_024375_p79 hypothetical protein phrog_18191 unknown function unknown function -1 39907 40176
YP_009044113.1 NC_024375_p28 AAA_5 domain-containing protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 16405 17427
YP_009044090.1 NC_024375_p5 hypothetical protein phrog_6883 unknown function unknown function -1 1289 1996
YP_009044123.1 NC_024375_p38 hypothetical protein phrog_17753 unknown function unknown function 1 21777 22238
YP_009044170.1 NC_024375_p85 hypothetical protein phrog_6406 unknown function unknown function -1 41444 41689
YP_009044136.1 NC_024375_p51 hypothetical protein phrog_8573 unknown function unknown function 1 27583 27867
YP_009044188.1 NC_024375_p103 major capsid protein phrog_544 major head protein head and packaging 1 54122 55027
YP_009044119.1 NC_024375_p34 hypothetical protein phrog_18431 unknown function unknown function 1 19797 20585
YP_009044143.1 NC_024375_p58 hypothetical protein phrog_18690 unknown function unknown function 1 30580 30879
YP_009044118.1 NC_024375_p33 hypothetical protein phrog_17097 unknown function unknown function 1 19575 19736
YP_009044150.1 NC_024375_p65 DUF1642 domain-containing protein phrog_26006 unknown function unknown function -1 33349 33558
YP_009044149.1 NC_024375_p64 hypothetical protein phrog_17830 unknown function unknown function -1 33209 33352
YP_009044107.1 NC_024375_p22 sigma factor phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 14047 14412
YP_009044144.1 NC_024375_p59 hypothetical protein singleton unknown function unknown function 1 31280 31375
YP_009044167.1 NC_024375_p82 hypothetical protein phrog_20334 unknown function unknown function -1 40602 40865
YP_009044087.1 NC_024375_p2 hypothetical protein phrog_7571 unknown function unknown function -1 522 722
YP_009044158.1 NC_024375_p73 His-Me finger endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 36088 36399
YP_009044173.1 NC_024375_p88 hypothetical protein phrog_10628 unknown function unknown function -1 42152 42403
YP_009044169.1 NC_024375_p84 hypothetical protein phrog_6406 unknown function unknown function -1 41164 41487
YP_009044131.1 NC_024375_p46 hypothetical protein phrog_7296 unknown function unknown function 1 24633 25178
YP_009044117.1 NC_024375_p32 hypothetical protein phrog_18570 unknown function unknown function 1 19301 19534
YP_009044183.1 NC_024375_p98 endolysin phrog_5115 ferredoxin moron, auxiliary metabolic gene and host takeover 1 48547 49494
YP_009044093.1 NC_024375_p8 radical SAM domain-containing protein phrog_17662 unknown function unknown function -1 2758 3411
YP_009044135.1 NC_024375_p50 hypothetical protein phrog_17663 unknown function unknown function 1 27152 27484
YP_009044184.1 NC_024375_p99 terminase large subunit phrog_2 terminase large subunit head and packaging 1 49563 50906
YP_009044177.1 NC_024375_p92 hypothetical protein phrog_17111 unknown function unknown function -1 43339 43725
YP_009044115.1 NC_024375_p30 hypothetical protein phrog_18040 unknown function unknown function 1 18358 18624
YP_009044168.1 NC_024375_p83 hypothetical protein phrog_6406 unknown function unknown function -1 40913 41164
YP_009044162.1 NC_024375_p77 hypothetical protein phrog_1384 Mom-like DNA modification protein other -1 39064 39717
YP_009044156.1 NC_024375_p71 hypothetical protein phrog_6406 unknown function unknown function -1 35679 35909
YP_009044154.1 NC_024375_p69 hypothetical protein phrog_20947 unknown function unknown function -1 34863 35357
YP_009044134.1 NC_024375_p49 hypothetical protein phrog_18584 unknown function unknown function 1 26816 27049
YP_009044189.1 NC_024375_p104 hypothetical protein phrog_17541 unknown function unknown function 1 55093 55290
YP_009044166.1 NC_024375_p81 hypothetical protein phrog_17919 unknown function unknown function -1 40412 40615
YP_009044095.1 NC_024375_p10 hypothetical protein phrog_18039 unknown function unknown function -1 4000 4200
YP_009044098.1 NC_024375_p13 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 5467 6249
YP_009044128.1 NC_024375_p43 hypothetical protein phrog_10844 unknown function unknown function 1 23610 23894
YP_009044132.1 NC_024375_p47 hypothetical protein phrog_17786 unknown function unknown function 1 25175 25483
YP_009044157.1 NC_024375_p72 hypothetical protein phrog_21953 unknown function unknown function -1 35902 36078
YP_009044089.1 NC_024375_p4 hypothetical protein phrog_18550 unknown function unknown function -1 1076 1276
YP_009044175.1 NC_024375_p90 hypothetical protein phrog_10628 unknown function unknown function -1 42661 42897
YP_009044099.1 NC_024375_p14 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 6250 7578
YP_009044172.1 NC_024375_p87 hypothetical protein phrog_10526 unknown function unknown function -1 41922 42149
YP_009044153.1 NC_024375_p68 hypothetical protein phrog_1666 unknown function unknown function -1 34604 34861
YP_009044195.1 NC_024375_p110 major tail protein phrog_41 major tail protein tail 1 57839 58549
YP_009044116.1 NC_024375_p31 hypothetical protein phrog_17535 unknown function unknown function 1 18617 19297
YP_009044193.1 NC_024375_p108 hypothetical protein phrog_17081 unknown function unknown function 1 57010 57396
YP_009044147.1 NC_024375_p62 hypothetical protein phrog_16767 unknown function unknown function -1 32462 32647
YP_009044163.1 NC_024375_p78 hypothetical protein phrog_18055 unknown function unknown function -1 39714 39923
YP_009044178.1 NC_024375_p93 terminase small subunit phrog_51 terminase small subunit head and packaging 1 44051 44551
YP_009044106.1 NC_024375_p21 P-loop containing nucleoside triphosphate hydrolase phrog_139 deoxynucleoside monophosphate kinase other 1 13521 14069
YP_009044152.1 NC_024375_p67 hypothetical protein phrog_19990 unknown function unknown function -1 34277 34441
YP_009044190.1 NC_024375_p105 fibronectin type III domain-containing protein phrog_18435 unknown function unknown function 1 55304 56182
YP_009044124.1 NC_024375_p39 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 22238 22504
YP_009044148.1 NC_024375_p63 hypothetical protein phrog_16663 unknown function unknown function -1 32637 33194
YP_009044155.1 NC_024375_p70 hypothetical protein phrog_18615 unknown function unknown function -1 35357 35635
YP_009044104.1 NC_024375_p19 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 11985 13010
YP_009044197.1 NC_024375_p112 hypothetical protein phrog_17465 unknown function unknown function 1 59000 59743
YP_009044179.1 NC_024375_p94 DUF2479 domain-containing protein phrog_3639 minor tail protein tail 1 44554 46452
YP_009044129.1 NC_024375_p44 hypothetical protein phrog_6414 unknown function unknown function 1 23897 24088
YP_009044160.1 NC_024375_p75 hypothetical protein phrog_17911 unknown function unknown function -1 36780 37025
YP_009044088.1 NC_024375_p3 hypothetical protein phrog_17281 unknown function unknown function -1 715 1086
YP_009044176.1 NC_024375_p91 hypothetical protein phrog_17491 unknown function unknown function -1 42887 43330
YP_009044097.1 NC_024375_p12 hypothetical protein phrog_6154 unknown function unknown function 1 5065 5448
YP_009044174.1 NC_024375_p89 hypothetical protein phrog_17836 unknown function unknown function -1 42415 42648
YP_009044171.1 NC_024375_p86 hypothetical protein phrog_10526 unknown function unknown function -1 41686 41919
YP_009044091.1 NC_024375_p6 hypothetical protein phrog_35832 unknown function unknown function 1 1997 2272
YP_009044109.1 NC_024375_p24 hypothetical protein phrog_18628 unknown function unknown function 1 14875 15561
YP_009044103.1 NC_024375_p18 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11373 11984
YP_009044120.1 NC_024375_p35 hypothetical protein phrog_21823 unknown function unknown function 1 20572 20799
YP_009044196.1 NC_024375_p111 hypothetical protein phrog_18667 unknown function unknown function 1 58629 58937
YP_009044121.1 NC_024375_p36 hypothetical protein phrog_17084 unknown function unknown function 1 20881 21360
YP_009044110.1 NC_024375_p25 hypothetical protein phrog_17749 unknown function unknown function 1 15577 15801
YP_009044112.1 NC_024375_p27 hypothetical protein phrog_17709 unknown function unknown function 1 16105 16383
YP_009044192.1 NC_024375_p107 hypothetical protein phrog_16721 unknown function unknown function 1 56616 57032
YP_009044100.1 NC_024375_p15 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7655 8620
YP_009044199.1 NC_024375_p114 tail protein phrog_202 distal tail protein Dit tail 1 62660 64750
YP_009044194.1 NC_024375_p109 DUF3168 domain-containing protein phrog_176 tail terminator connector 1 57396 57815
YP_009044096.1 NC_024375_p11 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4506 5009
YP_009044186.1 NC_024375_p101 capsid morphogenesis protein phrog_8089 head morphogenesis head and packaging 1 52595 53380
YP_009044111.1 NC_024375_p26 hypothetical protein phrog_19802 unknown function unknown function 1 15794 16030
YP_009044122.1 NC_024375_p37 hypothetical protein phrog_17542 unknown function unknown function 1 21350 21784
YP_009044125.1 NC_024375_p40 hypothetical protein phrog_18081 unknown function unknown function 1 22497 22826
YP_009044105.1 NC_024375_p20 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 13007 13519
YP_009044139.1 NC_024375_p54 hypothetical protein phrog_4264 unknown function unknown function 1 28385 28732
YP_009044181.1 NC_024375_p96 hypothetical protein phrog_1009 unknown function unknown function 1 47916 48266