Genomic map of Staphylococcus phage DW2 (NC_024391)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024391
Definition
Staphylococcus phage DW2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
DB of origin
REFSEQ
Length
41941
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
35.97
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009045046.1 NC_024391_p53 tail protein phrog_33 distal tail protein Dit tail 1 27242 28183
YP_009045047.1 NC_024391_p54 minor structural protein/ peptidase phrog_663 minor head protein head and packaging 1 28194 30080
YP_009045041.1 NC_024391_p48 tail protein phrog_176 tail terminator connector 1 22189 22614
YP_009044995.1 NC_024391_p2 lipoprotein phrog_4037 unknown function unknown function -1 1472 1975
YP_009045006.1 NC_024391_p13 single strand DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5752 6390
YP_009045028.1 NC_024391_p35 hypothetical protein phrog_1367 unknown function unknown function 1 14122 14268
YP_009045036.1 NC_024391_p43 major head protein phrog_10 major head protein head and packaging 1 20010 20924
YP_009044999.1 NC_024391_p6 repressor phrog_3 transcriptional repressor transcription regulation 1 3460 3669
YP_009045023.1 NC_024391_p30 SaPIbov1 derepressor phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 12589 13122
YP_009045054.1 NC_024391_p61 holin phrog_962 holin lysis 1 39140 39577
YP_009044996.1 NC_024391_p3 hypothetical protein phrog_5375 unknown function unknown function -1 1979 2470
YP_009044994.1 NC_024391_p1 serine recombinase phrog_95 integrase integration and excision -1 23 1414
YP_009045019.1 NC_024391_p26 hypothetical protein phrog_467 unknown function unknown function 1 11456 11884
YP_009045009.1 NC_024391_p16 replication protein phrog_1163 unknown function unknown function 1 7496 8317
YP_009045033.1 NC_024391_p40 minor head protein phrog_115 minor head protein head and packaging 1 18145 19098
YP_009045048.1 NC_024391_p55 minor structural protein phrog_287 minor tail protein tail 1 30093 31991
YP_009045030.1 NC_024391_p37 terminase small subunit phrog_1595 terminase small subunit head and packaging 1 15045 15539
YP_009044998.1 NC_024391_p5 Xre family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 2971 3297
YP_009045010.1 NC_024391_p17 DNA replication protein DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 8330 9115
YP_009045049.1 NC_024391_p56 tail protein phrog_257 minor tail protein tail 1 31991 33814
YP_009045012.1 NC_024391_p19 hypothetical protein phrog_433 unknown function unknown function 1 9283 9507
YP_009045031.1 NC_024391_p38 terminase large subunit phrog_2 terminase large subunit head and packaging 1 15532 16755
YP_009045035.1 NC_024391_p42 alanyl-tRNA synthetase phrog_172 head scaffolding protein head and packaging 1 19409 19993
YP_009045051.1 NC_024391_p58 hypothetical protein phrog_134 unknown function unknown function 1 34192 34368
YP_009045050.1 NC_024391_p57 hypothetical protein phrog_300 tail fiber protein tail 1 33814 34191
YP_009045021.1 NC_024391_p28 acetyltransferase phrog_1034 unknown function unknown function 1 12071 12355
YP_009045026.1 NC_024391_p33 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 13582 13755
YP_009045017.1 NC_024391_p24 virulence associated protein phrog_258 virulence associated other 1 10975 11232
YP_009045032.1 NC_024391_p39 portal protein phrog_64 portal protein head and packaging 1 16758 18167
YP_009045037.1 NC_024391_p44 hypothetical protein phrog_2406 unknown function unknown function 1 20936 21079
YP_009045052.1 NC_024391_p59 hypothetical protein phrog_276 unknown function unknown function 1 34408 34713
YP_009045015.1 NC_024391_p22 leukocidin protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 10113 10730
YP_009045008.1 NC_024391_p15 virulence associated protein phrog_398 unknown function unknown function 1 6829 7524
YP_009044997.1 NC_024391_p4 toxin component of toxin-antitoxin system phrog_87 metallo-protease other -1 2491 2949
YP_009045027.1 NC_024391_p34 hypothetical protein phrog_2409 unknown function unknown function 1 13756 14121
YP_009045005.1 NC_024391_p12 bacteriophage resistance factor phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 5273 5752
YP_009045011.1 NC_024391_p18 SaPI1 derepressor phrog_809 transcriptional regulator transcription regulation 1 9112 9270
YP_009045029.1 NC_024391_p36 transcriptional activator RinA phrog_36 transcriptional regulator transcription regulation 1 14292 14714
YP_009045022.1 NC_024391_p29 hypothetical protein phrog_266 unknown function unknown function 1 12348 12596
YP_009045042.1 NC_024391_p49 tail protein phrog_238 major tail protein tail 1 22615 23172
YP_009045014.1 NC_024391_p21 hypothetical protein phrog_299 unknown function unknown function 1 9927 10112
YP_009045018.1 NC_024391_p25 hypothetical protein phrog_1241 unknown function unknown function 1 11247 11453
YP_009045016.1 NC_024391_p23 hypothetical protein phrog_236 nucleotide kinase other 1 10730 10984
YP_009045040.1 NC_024391_p47 structural protein phrog_5 tail completion or Neck1 protein connector 1 21769 22176
YP_009045034.1 NC_024391_p41 seryl-tRNA synthetase phrog_2881 dCMP hydroxymethylase DNA, RNA and nucleotide metabolism 1 19100 19306
YP_009045013.1 NC_024391_p20 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9518 9922
YP_009045007.1 NC_024391_p14 single strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 6390 6815
YP_009045044.1 NC_024391_p51 tail assembly protein phrog_183 tail chaperone protein tail 1 23239 23751
YP_009045024.1 NC_024391_p31 transcriptional activator RinB phrog_278 transcriptional regulator transcription regulation 1 13189 13395
YP_009045053.1 NC_024391_p60 tail fiber phrog_18372 tail fiber protein tail 1 37086 39089
YP_009045000.1 NC_024391_p7 antirepressor phrog_463 anti-repressor transcription regulation 1 3708 4421
YP_009045039.1 NC_024391_p46 head-tail adapter phrog_25 head closure Hc1 connector 1 21447 21782
YP_009045002.1 NC_024391_p9 hypothetical protein singleton unknown function unknown function 1 4697 4816
YP_009045020.1 NC_024391_p27 hypothetical protein phrog_36587 unknown function unknown function 1 11961 12074
YP_009045004.1 NC_024391_p11 hypothetical protein phrog_3119 unknown function unknown function 1 5044 5280
YP_009045025.1 NC_024391_p32 hypothetical protein phrog_1122 unknown function unknown function 1 13392 13580
YP_009045043.1 NC_024391_p50 tail assembly protein phrog_31021 tail assembly chaperone tail 1 23239 23592
YP_009045043.1 NC_024391_p50 tail assembly protein phrog_31021 tail assembly chaperone tail 1 23592 24080
YP_009045038.1 NC_024391_p45 head-tail adapter phrog_1161 head-tail adaptor connector 1 21085 21435
YP_009045003.1 NC_024391_p10 hypothetical protein phrog_401 unknown function unknown function 1 4776 5036
YP_009045001.1 NC_024391_p8 hypothetical protein phrog_369 unknown function unknown function 1 4523 4684
YP_009045055.1 NC_024391_p62 endolysin phrog_635 endolysin lysis 1 39558 41003
YP_009045045.1 NC_024391_p52 tape measure protein phrog_58 tail length tape measure protein tail 1 24084 27227