Genomic map of Listeria phage LP-114 (NC_024392)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024392
Definition
Listeria phage LP-114, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Homburgvirus.
DB of origin
REFSEQ
Length
66676
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
116
%GC
36.43
Number of singletons
1
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009045087.1 NC_024392_p32 hypothetical protein phrog_17535 unknown function unknown function 1 25832 26512
YP_009045146.1 NC_024392_p91 hypothetical protein phrog_10526 unknown function unknown function -1 47875 48102
YP_009045100.1 NC_024392_p45 hypothetical protein phrog_7296 unknown function unknown function 1 31022 31543
YP_009045120.1 NC_024392_p65 DUF1642 domain-containing protein phrog_26006 unknown function unknown function -1 40331 40540
YP_009045102.1 NC_024392_p47 hypothetical protein phrog_17786 unknown function unknown function 1 32100 32405
YP_009045148.1 NC_024392_p93 hypothetical protein phrog_17836 unknown function unknown function -1 48368 48601
YP_009045103.1 NC_024392_p48 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 32402 32920
YP_009045156.1 NC_024392_p101 holin phrog_297 holin lysis 1 54212 54496
YP_009045138.1 NC_024392_p83 hypothetical protein phrog_18055 unknown function unknown function -1 45946 46155
YP_009045119.1 NC_024392_p64 hypothetical protein phrog_17830 unknown function unknown function -1 40179 40334
YP_009045170.1 NC_024392_p115 hypothetical protein phrog_18667 unknown function unknown function 1 64577 64885
YP_009045062.1 NC_024392_p7 hypothetical protein phrog_6883 unknown function unknown function -1 7729 8436
YP_009045141.1 NC_024392_p86 hypothetical protein phrog_17919 unknown function unknown function -1 46644 46847
YP_009045080.1 NC_024392_p25 hypothetical protein phrog_18628 unknown function unknown function 1 22090 22776
YP_009045163.1 NC_024392_p108 hypothetical protein phrog_17541 unknown function unknown function 1 61041 61238
YP_009045167.1 NC_024392_p112 hypothetical protein phrog_17081 unknown function unknown function 1 62958 63344
YP_009045126.1 NC_024392_p71 hypothetical protein phrog_20947 unknown function unknown function -1 42208 42702
YP_009045118.1 NC_024392_p63 hypothetical protein phrog_16663 unknown function unknown function -1 39632 40177
YP_009045155.1 NC_024392_p100 hypothetical protein phrog_1009 unknown function unknown function 1 53859 54215
YP_009045154.1 NC_024392_p99 DUF2479 domain-containing protein phrog_18602 virion structural protein head and packaging 1 52414 53853
YP_009045078.1 NC_024392_p23 sigma factor phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 21262 21627
YP_009045072.1 NC_024392_p17 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 15474 18532
YP_009045169.1 NC_024392_p114 major tail protein phrog_41 major tail protein tail 1 63787 64497
YP_009045159.1 NC_024392_p104 portal protein phrog_64 portal protein head and packaging 1 56888 58537
YP_009045129.1 NC_024392_p74 hypothetical protein phrog_21953 unknown function unknown function -1 43247 43423
YP_009045066.1 NC_024392_p11 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10930 11433
YP_009045081.1 NC_024392_p26 hypothetical protein phrog_17749 unknown function unknown function 1 22792 23016
YP_009045099.1 NC_024392_p44 hypothetical protein phrog_6414 unknown function unknown function 1 30821 31012
YP_009045065.1 NC_024392_p10 hypothetical protein phrog_18039 unknown function unknown function -1 10424 10624
YP_009045165.1 NC_024392_p110 hypothetical protein phrog_132 head-tail adaptor connector 1 62208 62567
YP_009045125.1 NC_024392_p70 hypothetical protein phrog_1666 unknown function unknown function -1 41949 42206
YP_009045088.1 NC_024392_p33 hypothetical protein phrog_18570 unknown function unknown function 1 26516 26749
YP_009045171.1 NC_024392_p116 hypothetical protein phrog_17465 unknown function unknown function 1 64948 65691
YP_009045057.1 NC_024392_p2 tail protein phrog_202 distal tail protein Dit tail 1 2024 4114
YP_009045113.1 NC_024392_p58 LPXTG cell wall anchor domain-containing protein phrog_16892 unknown function unknown function 1 36800 37636
YP_009045064.1 NC_024392_p9 radical SAM domain-containing protein phrog_17662 unknown function unknown function -1 9198 9851
YP_009045097.1 NC_024392_p42 hypothetical protein phrog_31463 unknown function unknown function 1 30105 30566
YP_009045162.1 NC_024392_p107 major capsid protein phrog_544 major head protein head and packaging 1 60070 60975
YP_009045132.1 NC_024392_p77 hypothetical protein phrog_17911 unknown function unknown function -1 44125 44370
YP_009045127.1 NC_024392_p72 hypothetical protein phrog_18615 unknown function unknown function -1 42702 42980
YP_009045091.1 NC_024392_p36 hypothetical protein phrog_21823 unknown function unknown function 1 27783 28010
YP_009045123.1 NC_024392_p68 hypothetical protein phrog_1494 unknown function unknown function -1 41557 41769
YP_009045060.1 NC_024392_p5 hypothetical protein phrog_17281 unknown function unknown function -1 7155 7526
YP_009045073.1 NC_024392_p18 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17078 17584
YP_009045151.1 NC_024392_p96 hypothetical protein phrog_17111 unknown function unknown function -1 49292 49678
YP_009045144.1 NC_024392_p89 hypothetical protein phrog_6406 unknown function unknown function -1 47397 47642
YP_009045063.1 NC_024392_p8 hypothetical protein phrog_17927 unknown function unknown function -1 8683 9201
YP_009045136.1 NC_024392_p81 hypothetical protein phrog_28605 unknown function unknown function -1 44866 45225
YP_009045157.1 NC_024392_p102 endolysin phrog_5115 ferredoxin moron, auxiliary metabolic gene and host takeover 1 54496 55443
YP_009045166.1 NC_024392_p111 hypothetical protein phrog_16721 unknown function unknown function 1 62564 62980
YP_009045128.1 NC_024392_p73 hypothetical protein phrog_6406 unknown function unknown function -1 43024 43254
YP_009045108.1 NC_024392_p53 hypothetical protein phrog_17278 unknown function unknown function 1 35095 35295
YP_009045058.1 NC_024392_p3 minor structural protein phrog_17797 tail protein tail 1 4126 6915
YP_009045149.1 NC_024392_p94 hypothetical protein phrog_10628 unknown function unknown function -1 48614 48850
YP_009045161.1 NC_024392_p106 DUF4355 domain-containing protein phrog_172 head scaffolding protein head and packaging 1 59398 60039
YP_009045152.1 NC_024392_p97 terminase small subunit phrog_51 terminase small subunit head and packaging 1 50000 50500
YP_009045107.1 NC_024392_p52 hypothetical protein phrog_16753 unknown function unknown function 1 34802 35095
YP_009045110.1 NC_024392_p55 hypothetical protein phrog_28291 unknown function unknown function 1 35723 35992
YP_009045143.1 NC_024392_p88 hypothetical protein phrog_6406 unknown function unknown function -1 47144 47404
YP_009045133.1 NC_024392_p78 hypothetical protein phrog_38652 unknown function unknown function -1 44352 44486
YP_009045059.1 NC_024392_p4 hypothetical protein phrog_7571 unknown function unknown function -1 6962 7162
YP_009045071.1 NC_024392_p16 hypothetical protein phrog_17905 methyltransferase other 1 15047 15493
YP_009045096.1 NC_024392_p41 hypothetical protein phrog_18081 unknown function unknown function 1 29707 30036
YP_009045147.1 NC_024392_p92 hypothetical protein phrog_10628 unknown function unknown function -1 48105 48356
YP_009045093.1 NC_024392_p38 hypothetical protein phrog_17542 unknown function unknown function 1 28560 28994
YP_009045092.1 NC_024392_p37 hypothetical protein phrog_17084 unknown function unknown function 1 28091 28570
YP_009045105.1 NC_024392_p50 hypothetical protein phrog_17663 unknown function unknown function 1 34074 34406
YP_009045095.1 NC_024392_p40 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 29448 29714
YP_009045094.1 NC_024392_p39 hypothetical protein phrog_17753 unknown function unknown function 1 28987 29448
YP_009045114.1 NC_024392_p59 hypothetical protein phrog_18690 unknown function unknown function 1 37771 38070
YP_009045139.1 NC_024392_p84 hypothetical protein phrog_18191 unknown function unknown function -1 46139 46408
YP_009045130.1 NC_024392_p75 His-Me finger endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism -1 43433 43744
YP_009045109.1 NC_024392_p54 hypothetical protein phrog_4264 unknown function unknown function 1 35307 35654
YP_009045137.1 NC_024392_p82 hypothetical protein phrog_1384 Mom-like DNA modification protein other -1 45296 45949
YP_009045075.1 NC_024392_p20 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 19200 20225
YP_009045098.1 NC_024392_p43 hypothetical protein phrog_18681 unknown function unknown function 1 30632 30814
YP_009045090.1 NC_024392_p35 hypothetical protein phrog_18431 unknown function unknown function 1 27008 27796
YP_009045150.1 NC_024392_p95 hypothetical protein phrog_17491 unknown function unknown function -1 48840 49283
YP_009045082.1 NC_024392_p27 hypothetical protein phrog_19802 unknown function unknown function 1 23009 23245
YP_009045076.1 NC_024392_p21 crossover junction endodeoxyribonuclease phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 20222 20734
YP_009045134.1 NC_024392_p79 hypothetical protein phrog_21092 unknown function unknown function -1 44464 44664
YP_009045153.1 NC_024392_p98 DUF2479 domain-containing protein phrog_3639 minor tail protein tail 1 50503 52401
YP_009045074.1 NC_024392_p19 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 18588 19199
YP_009045117.1 NC_024392_p62 hypothetical protein phrog_16767 unknown function unknown function -1 39448 39630
YP_009045070.1 NC_024392_p15 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 14079 15044
YP_009045168.1 NC_024392_p113 DUF3168 domain-containing protein phrog_176 tail terminator connector 1 63344 63763
YP_009045142.1 NC_024392_p87 hypothetical protein phrog_20334 unknown function unknown function -1 46834 47097
YP_009045079.1 NC_024392_p24 hypothetical protein phrog_18507 unknown function unknown function 1 21587 21997
YP_009045124.1 NC_024392_p69 hypothetical protein singleton unknown function unknown function -1 41809 41952
YP_009045083.1 NC_024392_p28 hypothetical protein phrog_17709 unknown function unknown function 1 23320 23598
YP_009045067.1 NC_024392_p12 hypothetical protein phrog_6154 unknown function unknown function 1 11489 11872
YP_009045077.1 NC_024392_p22 P-loop containing nucleoside triphosphate hydrolase phrog_139 deoxynucleoside monophosphate kinase other 1 20736 21284
YP_009045131.1 NC_024392_p76 hypothetical protein phrog_2316 unknown function unknown function -1 43808 44104
YP_009045160.1 NC_024392_p105 capsid morphogenesis protein phrog_8089 head morphogenesis head and packaging 1 58544 59329
YP_009045086.1 NC_024392_p31 hypothetical protein phrog_18040 unknown function unknown function 1 25573 25839
YP_009045106.1 NC_024392_p51 hypothetical protein phrog_8573 unknown function unknown function 1 34505 34789
YP_009045122.1 NC_024392_p67 hypothetical protein phrog_121 unknown function unknown function -1 41193 41570
YP_009045140.1 NC_024392_p85 hypothetical protein phrog_18373 unknown function unknown function -1 46421 46630
YP_009045085.1 NC_024392_p30 hypothetical protein phrog_7005 unknown function unknown function 1 24661 25572
YP_009045121.1 NC_024392_p66 DUF1642 domain-containing protein phrog_121 unknown function unknown function -1 40540 41175
YP_009045115.1 NC_024392_p60 hypothetical protein phrog_27735 unknown function unknown function 1 38453 38578
YP_009045069.1 NC_024392_p14 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 12674 14002
YP_009045101.1 NC_024392_p46 hypothetical protein phrog_7296 unknown function unknown function 1 31558 32103
YP_009045158.1 NC_024392_p103 terminase large subunit phrog_2 terminase large subunit head and packaging 1 55512 56855
YP_009045056.1 NC_024392_p1 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 1 2020
YP_009045056.1 NC_024392_p1 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 65691 66676
YP_009045112.1 NC_024392_p57 hypothetical protein phrog_18105 unknown function unknown function 1 36452 36739
YP_009045145.1 NC_024392_p90 hypothetical protein phrog_10526 unknown function unknown function -1 47639 47872
YP_009045116.1 NC_024392_p61 hypothetical protein phrog_17121 unknown function unknown function -1 39229 39423
YP_009045061.1 NC_024392_p6 hypothetical protein phrog_18550 unknown function unknown function -1 7516 7716
YP_009045104.1 NC_024392_p49 hypothetical protein phrog_18584 unknown function unknown function 1 33738 33971
YP_009045164.1 NC_024392_p109 fibronectin type III domain-containing protein phrog_18435 unknown function unknown function 1 61252 62130
YP_009045111.1 NC_024392_p56 hypothetical protein phrog_7822 unknown function unknown function 1 35995 36441
YP_009045068.1 NC_024392_p13 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 11891 12673
YP_009045084.1 NC_024392_p29 AAA_5 domain-containing protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 23620 24642
YP_009045089.1 NC_024392_p34 hypothetical protein phrog_17097 unknown function unknown function 1 26790 26951
YP_009045135.1 NC_024392_p80 hypothetical protein phrog_20263 unknown function unknown function -1 44667 44864