Genomic map of Pseudomonas phage MP48 (NC_024782)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024782
Definition
Pseudomonas phage MP48, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Casadabanvirus; unclassified Casadabanvirus.
DB of origin
REFSEQ
Length
36838
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
64.09
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009055251.1 NC_024782_p23 hypothetical protein phrog_1103 unknown function unknown function 1 12045 12233
YP_009055248.1 NC_024782_p20 hypothetical protein phrog_1024 unknown function unknown function 1 10408 10878
YP_009055269.1 NC_024782_p41 tail component protein phrog_24 tail length tape measure protein tail 1 24388 27948
YP_009055243.1 NC_024782_p15 hypothetical protein phrog_3652 unknown function unknown function 1 8537 8806
YP_009055237.1 NC_024782_p9 hypothetical protein phrog_3765 unknown function unknown function 1 6017 6133
YP_009055245.1 NC_024782_p17 hypothetical protein phrog_286 unknown function unknown function 1 9170 9577
YP_009055238.1 NC_024782_p10 hypothetical protein phrog_2119 unknown function unknown function 1 6133 6546
YP_009055252.1 NC_024782_p24 hypothetical protein phrog_756 DNA binding protein DNA, RNA and nucleotide metabolism 1 12242 12742
YP_009055235.1 NC_024782_p7 DNA transposition protein phrog_296 DNA transposition protein integration and excision 1 4618 5388
YP_009055253.1 NC_024782_p25 hypothetical protein phrog_38 terminase large subunit head and packaging 1 12739 14514
YP_009055267.1 NC_024782_p39 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23772 24385
YP_009055242.1 NC_024782_p14 hypothetical protein phrog_12417 unknown function unknown function 1 8046 8534
YP_009055249.1 NC_024782_p21 structural protein phrog_873 endolysin head and packaging 1 10878 11294
YP_009055229.1 NC_024782_p1 c repressor phrog_4 transcriptional repressor transcription regulation -1 170 892
YP_009055236.1 NC_024782_p8 hypothetical protein phrog_2030 transcriptional regulator transcription regulation 1 5385 6032
YP_009055255.1 NC_024782_p27 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging 1 16112 17398
YP_009055266.1 NC_024782_p38 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 22998 23768
YP_009055263.1 NC_024782_p35 hypothetical protein phrog_195 head-tail adaptor connector 1 21912 22328
YP_009055256.1 NC_024782_p28 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 17398 17865
YP_009055239.1 NC_024782_p11 hypothetical protein phrog_2043 unknown function unknown function 1 6536 6820
YP_009055233.1 NC_024782_p5 hypothetical protein phrog_4468 unknown function unknown function 1 2146 2556
YP_009055274.1 NC_024782_p46 hypothetical protein phrog_1180 tail assembly chaperone tail 1 32360 32599
YP_009055270.1 NC_024782_p42 hypothetical protein phrog_687 structural protein head and packaging 1 27956 28912
YP_009055264.1 NC_024782_p36 hypothetical protein phrog_209 portal protein head and packaging 1 22325 22798
YP_009055240.1 NC_024782_p12 host nuclease inhibitor protein phrog_18351 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 6837 7733
YP_009055246.1 NC_024782_p18 hypothetical protein phrog_836 late transcriptional activator transcription regulation 1 9564 10013
YP_009055234.1 NC_024782_p6 transposase A phrog_310 transposase integration and excision 1 2549 4621
YP_009055272.1 NC_024782_p44 hypothetical protein phrog_1082 tail assembly protein tail 1 29837 31540
YP_009055268.1 NC_024782_p40 hypothetical protein phrog_1442 tail assembly chaperone tail 1 23772 24257
YP_009055275.1 NC_024782_p47 hypothetical protein phrog_1196 tail assembly chaperone tail 1 32596 32814
YP_009055265.1 NC_024782_p37 hypothetical protein phrog_3129 unknown function unknown function 1 22786 22965
YP_009055273.1 NC_024782_p45 hypothetical protein phrog_778 tail assembly protein tail 1 31575 32351
YP_009055241.1 NC_024782_p13 hypothetical protein phrog_4367 unknown function unknown function 1 7735 8043
YP_009055244.1 NC_024782_p16 hypothetical protein phrog_14676 unknown function unknown function 1 8991 9173
YP_009055254.1 NC_024782_p26 portal protein phrog_113 portal protein head and packaging 1 14526 16112
YP_009055260.1 NC_024782_p32 hypothetical protein phrog_371 major head protein head and packaging 1 20327 21241
YP_009055231.1 NC_024782_p3 hypothetical protein phrog_2345 transcriptional regulator transcription regulation 1 1389 1823
YP_009055259.1 NC_024782_p31 protease (I) and scaffold (Z) protein phrog_328 head maturation protease head and packaging 1 19352 20323
YP_009055277.1 NC_024782_p49 hypothetical protein phrog_2875 virion structural protein head and packaging 1 35008 36159
YP_009055247.1 NC_024782_p19 hypothetical protein phrog_3648 unknown function unknown function 1 10116 10463
YP_009055232.1 NC_024782_p4 hypothetical protein phrog_8647 unknown function unknown function 1 1823 2149
YP_009055278.1 NC_024782_p50 hypothetical protein phrog_2432 unknown function unknown function 1 36156 36449
YP_009055262.1 NC_024782_p34 hypothetical protein phrog_3376 unknown function unknown function 1 21748 21915
YP_009055271.1 NC_024782_p43 hypothetical protein phrog_687 structural protein head and packaging 1 28914 29837
YP_009055250.1 NC_024782_p22 hypothetical protein phrog_2975 Rz-like spanin lysis 1 11533 11934
YP_009055230.1 NC_024782_p2 Ner-like protein phrog_769 transcriptional repressor transcription regulation 1 1042 1386
YP_009055257.1 NC_024782_p29 hypothetical protein phrog_9439 unknown function unknown function 1 18139 18558
YP_009055261.1 NC_024782_p33 hypothetical protein phrog_4833 unknown function unknown function 1 21308 21748
YP_009055258.1 NC_024782_p30 hypothetical protein phrog_18309 unknown function unknown function 1 18908 19012
YP_009055276.1 NC_024782_p48 hypothetical protein phrog_1101 tail protein tail 1 32804 35011