Genomic map of Escherichia phage vB_EcoP_PhAPEC5 (NC_024786)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024786
Definition
Escherichia phage vB_EcoP_PhAPEC5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus.
DB of origin
REFSEQ
Length
71248
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
43.49
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009055513.1 NC_024786_p8 hypothetical protein phrog_6887 unknown function unknown function 1 2281 2502
YP_009055541.1 NC_024786_p36 hypothetical protein phrog_7471 unknown function unknown function 1 14907 15098
YP_009055573.1 NC_024786_p68 portal protein phrog_1216 portal protein head and packaging -1 56582 58852
YP_009055562.1 NC_024786_p57 hypothetical protein phrog_322 unknown function unknown function 1 35217 35597
YP_009055530.1 NC_024786_p25 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9848 11023
YP_009055539.1 NC_024786_p34 hypothetical protein phrog_7900 unknown function unknown function 1 14368 14595
YP_009055587.1 NC_024786_p82 hypothetical protein phrog_1365 unknown function unknown function 1 70606 70920
YP_009055546.1 NC_024786_p41 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 20614 21924
YP_009055559.1 NC_024786_p54 hypothetical protein phrog_7641 unknown function unknown function 1 32380 32829
YP_009055525.1 NC_024786_p20 capsid decorating protein phrog_2973 Hoc-like head decoration head and packaging 1 7117 7950
YP_009055581.1 NC_024786_p76 hypothetical protein phrog_2109 unknown function unknown function -1 67988 68677
YP_009055532.1 NC_024786_p27 hypothetical protein phrog_7594 unknown function unknown function 1 11503 11706
YP_009055565.1 NC_024786_p60 structural protein phrog_6126 virion structural protein head and packaging -1 47062 49017
YP_009055542.1 NC_024786_p37 rIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 15126 17687
YP_009055571.1 NC_024786_p66 hypothetical protein phrog_2120 tail length tape measure protein tail -1 54984 56204
YP_009055555.1 NC_024786_p50 primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 28018 30171
YP_009055512.1 NC_024786_p7 hypothetical protein phrog_20151 unknown function unknown function 1 2045 2284
YP_009055583.1 NC_024786_p78 hypothetical protein phrog_9160 unknown function unknown function 1 69341 69739
YP_009055514.1 NC_024786_p9 hypothetical protein phrog_1972 unknown function unknown function 1 2499 2756
YP_009055582.1 NC_024786_p77 hypothetical protein phrog_7213 unknown function unknown function 1 68861 69139
YP_009055574.1 NC_024786_p69 hypothetical protein phrog_6197 Rz-like spanin lysis -1 58861 59361
YP_009055526.1 NC_024786_p21 hypothetical protein phrog_7508 unknown function unknown function 1 8056 8244
YP_009055552.1 NC_024786_p47 hypothetical protein phrog_9919 unknown function unknown function 1 26062 26529
YP_009055521.1 NC_024786_p16 RNA polymerase RNAP1 subunit B phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4558 5376
YP_009055580.1 NC_024786_p75 terminase phrog_38 terminase large subunit head and packaging -1 66406 67995
YP_009055557.1 NC_024786_p52 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31021 31824
YP_009055543.1 NC_024786_p38 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 17692 19734
YP_009055538.1 NC_024786_p33 hypothetical protein phrog_12633 unknown function unknown function 1 14072 14308
YP_009055531.1 NC_024786_p26 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 11020 11472
YP_009055510.1 NC_024786_p5 hypothetical protein phrog_5407 unknown function unknown function 1 1324 1497
YP_009055560.1 NC_024786_p55 hypothetical protein phrog_37481 unknown function unknown function 1 33477 33599
YP_009055568.1 NC_024786_p63 structural protein phrog_2050 virion structural protein head and packaging -1 52143 52979
YP_009055540.1 NC_024786_p35 hypothetical protein phrog_9004 unknown function unknown function 1 14588 14914
YP_009055554.1 NC_024786_p49 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27449 28021
YP_009055511.1 NC_024786_p6 hypothetical protein phrog_7648 unknown function unknown function 1 1490 1666
YP_009055567.1 NC_024786_p62 hypothetical protein phrog_2220 unknown function unknown function -1 49487 52141
YP_009055528.1 NC_024786_p23 hypothetical protein phrog_11132 unknown function unknown function 1 8427 8753
YP_009055578.1 NC_024786_p73 hypothetical protein phrog_12242 tail protein tail -1 62987 65692
YP_009055575.1 NC_024786_p70 N-acetylmuramidase phrog_315 endolysin lysis -1 59342 59977
YP_009055516.1 NC_024786_p11 hypothetical protein phrog_464 unknown function unknown function 1 3079 3444
YP_009055584.1 NC_024786_p79 hypothetical protein phrog_11661 unknown function unknown function 1 69705 70019
YP_009055566.1 NC_024786_p61 hypothetical protein phrog_2646 unknown function unknown function -1 49030 49473
YP_009055586.1 NC_024786_p81 hypothetical protein phrog_16338 unknown function unknown function 1 70340 70609
YP_009055547.1 NC_024786_p42 hypothetical protein phrog_4881 unknown function unknown function 1 21935 22465
YP_009055522.1 NC_024786_p17 hypothetical protein phrog_15352 unknown function unknown function 1 5366 5527
YP_009055577.1 NC_024786_p72 hypothetical protein phrog_4217 tail protein tail -1 60802 62937
YP_009055520.1 NC_024786_p15 hypothetical protein phrog_14487 unknown function unknown function 1 4244 4504
YP_009055517.1 NC_024786_p12 hypothetical protein phrog_37989 unknown function unknown function 1 3437 3685
YP_009055558.1 NC_024786_p53 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31824 32378
YP_009055553.1 NC_024786_p48 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 26529 27509
YP_009055572.1 NC_024786_p67 hypothetical protein phrog_2346 unknown function unknown function -1 56224 56568
YP_009055544.1 NC_024786_p39 hypothetical protein phrog_6377 unknown function unknown function 1 19797 20192
YP_009055579.1 NC_024786_p74 hypothetical protein phrog_2125 virion structural protein head and packaging -1 65689 66399
YP_009055570.1 NC_024786_p65 major coat protein phrog_1357 major head protein head and packaging -1 53765 54967
YP_009055535.1 NC_024786_p30 hypothetical protein phrog_9867 unknown function unknown function 1 12544 12987
YP_009055545.1 NC_024786_p40 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 20116 20580
YP_009055548.1 NC_024786_p43 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 22475 24166
YP_009055507.1 NC_024786_p2 hypothetical protein singleton unknown function unknown function 1 191 424
YP_009055569.1 NC_024786_p64 hypothetical protein phrog_2130 unknown function unknown function -1 53056 53691
YP_009055506.1 NC_024786_p1 hypothetical protein singleton unknown function unknown function 1 22 141
YP_009055564.1 NC_024786_p59 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 36243 46958
YP_009055534.1 NC_024786_p29 hypothetical protein phrog_12812 unknown function unknown function 1 12158 12544
YP_009055550.1 NC_024786_p45 DNA polymerase phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 24837 25760
YP_009055524.1 NC_024786_p19 hypothetical protein phrog_12530 unknown function unknown function 1 6860 7042
YP_009055536.1 NC_024786_p31 thymidilate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 12987 13931
YP_009055508.1 NC_024786_p3 RNA polymerase RNAP1 subunit A phrog_4099 unknown function unknown function 1 458 943
YP_009055527.1 NC_024786_p22 hypothetical protein phrog_7665 unknown function unknown function 1 8241 8426
YP_009055518.1 NC_024786_p13 hypothetical protein phrog_13804 unknown function unknown function 1 3682 3867
YP_009055515.1 NC_024786_p10 hypothetical protein phrog_7827 unknown function unknown function 1 2753 3067
YP_009055561.1 NC_024786_p56 hypothetical protein singleton unknown function unknown function 1 33856 33975
YP_009055523.1 NC_024786_p18 RNA polymerase RNAP2 subunit A phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 5584 6801
YP_009055576.1 NC_024786_p71 hypothetical protein phrog_5211 unknown function unknown function -1 60212 60544
YP_009055563.1 NC_024786_p58 hypothetical protein phrog_872 unknown function unknown function 1 35716 36204
YP_009055509.1 NC_024786_p4 hypothetical protein phrog_13158 unknown function unknown function 1 1085 1327
YP_009055549.1 NC_024786_p44 HNH endonuclease inducing intron mobility phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24243 24773
YP_009055556.1 NC_024786_p51 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30228 30980
YP_009055519.1 NC_024786_p14 hypothetical protein phrog_2072 unknown function unknown function 1 3864 4244
YP_009055529.1 NC_024786_p24 hypothetical protein phrog_1297 ATPase other 1 8788 9840
YP_009055551.1 NC_024786_p46 hypothetical protein phrog_5974 unknown function unknown function 1 25757 26062
YP_009055588.1 NC_024786_p83 hypothetical protein phrog_12606 unknown function unknown function 1 70910 71248
YP_009055533.1 NC_024786_p28 membrane immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 11780 12040
YP_009055585.1 NC_024786_p80 hypothetical protein phrog_12099 unknown function unknown function 1 70023 70340
YP_009055537.1 NC_024786_p32 hypothetical protein phrog_15754 unknown function unknown function 1 13941 14066