Genomic map of Escherichia phage vB_EcoS_AKS96 (NC_024789)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024789
Definition
Escherichia phage bV_EcoS_AKS96, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus.
DB of origin
REFSEQ
Length
45746
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
43.94
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009056097.1 NC_024789_p42 hypothetical protein phrog_4596 unknown function unknown function 1 33507 33764
YP_009056071.1 NC_024789_p16 hypothetical protein phrog_569 tail length tape measure protein tail 1 11001 11315
YP_009056078.1 NC_024789_p23 tail fiber protein phrog_31 central tail fiber J tail 1 17291 20677
YP_009056094.1 NC_024789_p39 hypothetical protein phrog_3249 unknown function unknown function 1 32874 33074
YP_009056074.1 NC_024789_p19 minor tail protein phrog_14 minor tail protein tail 1 14752 15102
YP_009056102.1 NC_024789_p47 hypothetical protein phrog_10052 unknown function unknown function 1 35867 36055
YP_009056101.1 NC_024789_p46 hypothetical protein phrog_7411 unknown function unknown function 1 35682 35867
YP_009056092.1 NC_024789_p37 hypothetical protein phrog_6031 unknown function unknown function 1 32465 32659
YP_009056121.1 NC_024789_p66 hypothetical protein phrog_12148 unknown function unknown function 1 43478 43615
YP_009056061.1 NC_024789_p6 prohead protease phrog_530 head maturation protease head and packaging 1 4691 5800
YP_009056100.1 NC_024789_p45 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35117 35608
YP_009056057.1 NC_024789_p2 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 562 1077
YP_009056129.1 NC_024789_p74 hypothetical protein phrog_2919 unknown function unknown function 1 45498 45647
YP_009056095.1 NC_024789_p40 hypothetical protein phrog_2180 unknown function unknown function 1 33149 33274
YP_009056104.1 NC_024789_p49 holin phrog_2877 holin lysis 1 36357 36572
YP_009056090.1 NC_024789_p35 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 30074 32017
YP_009056122.1 NC_024789_p67 hypothetical protein phrog_16612 unknown function unknown function 1 43600 43722
YP_009056063.1 NC_024789_p8 hypothetical protein phrog_5073 tail fiber protein tail 1 6392 7276
YP_009056115.1 NC_024789_p60 hypothetical protein phrog_4448 unknown function unknown function -1 40990 41229
YP_009056058.1 NC_024789_p3 terminase large subunit phrog_38 terminase large subunit head and packaging 1 1070 2641
YP_009056113.1 NC_024789_p58 hypothetical protein phrog_12926 unknown function unknown function -1 40460 40762
YP_009056056.1 NC_024789_p1 terminase small subunit phrog_606 terminase small subunit head and packaging 1 1 516
YP_009056059.1 NC_024789_p4 portal protein phrog_146 portal protein head and packaging 1 2691 3965
YP_009056068.1 NC_024789_p13 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 9446 9874
YP_009056110.1 NC_024789_p55 hypothetical protein phrog_11986 unknown function unknown function -1 39680 39796
YP_009056075.1 NC_024789_p20 minor tail protein phrog_18 minor tail protein tail 1 15142 15906
YP_009056089.1 NC_024789_p34 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation -1 29508 29981
YP_009056099.1 NC_024789_p44 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 33915 35051
YP_009056087.1 NC_024789_p32 tail fiber phrog_4818 tail fiber protein tail -1 25736 28453
YP_009056066.1 NC_024789_p11 hypothetical protein phrog_302 virion structural protein head and packaging 1 8687 9088
YP_009056060.1 NC_024789_p5 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 3925 4689
YP_009056081.1 NC_024789_p26 hypothetical protein phrog_30596 unknown function unknown function 1 22233 22379
YP_009056072.1 NC_024789_p17 hypothetical protein phrog_680 tail length tape measure protein tail 1 11378 11632
YP_009056120.1 NC_024789_p65 hypothetical protein phrog_8335 unknown function unknown function 1 43248 43481
YP_009056116.1 NC_024789_p61 hypothetical protein phrog_5684 unknown function unknown function -1 41226 41444
YP_009056108.1 NC_024789_p53 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 37794 39377
YP_009056083.1 NC_024789_p28 hypothetical protein phrog_5247 unknown function unknown function 1 23364 23558
YP_009056096.1 NC_024789_p41 hypothetical protein phrog_2817 unknown function unknown function 1 33325 33510
YP_009056123.1 NC_024789_p68 hypothetical protein phrog_2452 unknown function unknown function 1 43726 44025
YP_009056065.1 NC_024789_p10 hypothetical protein phrog_2716 unknown function unknown function 1 8392 8640
YP_009056127.1 NC_024789_p72 hypothetical protein phrog_303 unknown function unknown function 1 44657 44896
YP_009056126.1 NC_024789_p71 hypothetical protein phrog_3955 unknown function unknown function 1 44520 44654
YP_009056077.1 NC_024789_p22 tail assembly protein phrog_32 tail assembly protein tail 1 16644 17210
YP_009056064.1 NC_024789_p9 major capsid protein phrog_264 major head protein head and packaging 1 7357 8301
YP_009056119.1 NC_024789_p64 hypothetical protein phrog_7327 unknown function unknown function 1 42634 43176
YP_009056093.1 NC_024789_p38 hypothetical protein phrog_2676 unknown function unknown function 1 32659 32877
YP_009056105.1 NC_024789_p50 endolysin phrog_7 endolysin lysis 1 36572 37054
YP_009056128.1 NC_024789_p73 hypothetical protein phrog_10885 unknown function unknown function 1 44889 45083
YP_009056098.1 NC_024789_p43 hypothetical protein phrog_20703 unknown function unknown function 1 33771 33911
YP_009056084.1 NC_024789_p29 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 23562 24530
YP_009056062.1 NC_024789_p7 hypothetical protein phrog_1989 unknown function unknown function 1 5803 6297
YP_009056073.1 NC_024789_p18 tail tape measure protein phrog_24 tail length tape measure protein tail 1 11667 14720
YP_009056086.1 NC_024789_p31 single-stranded DNA binding protein Ssb phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 25282 25704
YP_009056069.1 NC_024789_p14 hypothetical protein phrog_179 tail terminator connector 1 9864 10262
YP_009056080.1 NC_024789_p25 lipoprotein phrog_4281 unknown function unknown function -1 21670 21915
YP_009056118.1 NC_024789_p63 hypothetical protein phrog_4841 unknown function unknown function 1 42119 42634
YP_009056070.1 NC_024789_p15 major tail protein phrog_584 major tail protein tail 1 10277 10927
YP_009056091.1 NC_024789_p36 hypothetical protein phrog_824 unknown function unknown function 1 32017 32406
YP_009056107.1 NC_024789_p52 hypothetical protein phrog_2794 unknown function unknown function -1 37454 37789
YP_009056088.1 NC_024789_p33 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 28532 29455
YP_009056106.1 NC_024789_p51 Rz1 protein phrog_1804 Rz-like spanin lysis 1 37036 37440
YP_009056076.1 NC_024789_p21 minor tail protein phrog_30 minor tail protein tail 1 15917 16663
YP_009056082.1 NC_024789_p27 regulatory protein phrog_8235 anti-repressor transcription regulation 1 22501 23211
YP_009056085.1 NC_024789_p30 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 24587 25234
YP_009056067.1 NC_024789_p12 hypothetical protein phrog_161 head closure Hc1 connector 1 9085 9453
YP_009056124.1 NC_024789_p69 hypothetical protein phrog_1312 unknown function unknown function 1 44098 44226
YP_009056111.1 NC_024789_p56 hypothetical protein phrog_926 unknown function unknown function -1 39875 40084
YP_009056079.1 NC_024789_p24 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 20708 21670
YP_009056114.1 NC_024789_p59 hypothetical protein phrog_4548 unknown function unknown function -1 40837 40989
YP_009056125.1 NC_024789_p70 hypothetical protein phrog_11452 unknown function unknown function 1 44223 44516
YP_009056112.1 NC_024789_p57 hypothetical protein phrog_2684 unknown function unknown function -1 40081 40434
YP_009056103.1 NC_024789_p48 hypothetical protein phrog_4788 unknown function unknown function 1 36068 36241
YP_009056109.1 NC_024789_p54 hypothetical protein phrog_8121 unknown function unknown function -1 39418 39597
YP_009056117.1 NC_024789_p62 hypothetical protein singleton unknown function unknown function 1 41529 41651