Genomic map of Escherichia phage vB_EcoP_PhAPEC7 (NC_024790)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024790
Definition
Escherichia phage vB_EcoP_PhAPEC7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Gamaleyavirus.
DB of origin
REFSEQ
Length
71778
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
43.34
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009056181.1 NC_024790_p52 hypothetical protein phrog_7641 unknown function unknown function 1 33026 33475
YP_009056199.1 NC_024790_p70 hypothetical protein phrog_5211 unknown function unknown function -1 60248 60580
YP_009056188.1 NC_024790_p59 hypothetical protein phrog_2646 unknown function unknown function -1 49066 49509
YP_009056159.1 NC_024790_p30 hypothetical protein phrog_9867 unknown function unknown function 1 13041 13484
YP_009056153.1 NC_024790_p24 hypothetical protein phrog_1297 ATPase other 1 9270 10322
YP_009056178.1 NC_024790_p49 hypothetical protein phrog_8790 restriction endonuclease DNA, RNA and nucleotide metabolism 1 30546 30809
YP_009056211.1 NC_024790_p82 hypothetical protein singleton unknown function unknown function 1 71078 71371
YP_009056164.1 NC_024790_p35 hypothetical protein phrog_7471 unknown function unknown function 1 15251 15442
YP_009056133.1 NC_024790_p4 hypothetical protein phrog_13158 unknown function unknown function 1 1565 1807
YP_009056176.1 NC_024790_p47 hypothetical protein phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 27868 30021
YP_009056195.1 NC_024790_p66 structural protein phrog_1216 portal protein head and packaging -1 56618 58888
YP_009056208.1 NC_024790_p79 hypothetical protein phrog_12099 unknown function unknown function 1 70091 70405
YP_009056196.1 NC_024790_p67 hypothetical protein phrog_20026 Rz-like spanin lysis -1 58897 59115
YP_009056206.1 NC_024790_p77 hypothetical protein phrog_9160 unknown function unknown function 1 69409 69807
YP_009056209.1 NC_024790_p80 hypothetical protein phrog_1365 unknown function unknown function 1 70405 70719
YP_009056168.1 NC_024790_p39 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 20601 20942
YP_009056152.1 NC_024790_p23 hypothetical protein phrog_11132 unknown function unknown function 1 8909 9235
YP_009056167.1 NC_024790_p38 hypothetical protein phrog_6377 unknown function unknown function 1 20159 20554
YP_009056190.1 NC_024790_p61 structural protein phrog_2050 virion structural protein head and packaging -1 52179 53015
YP_009056193.1 NC_024790_p64 hypothetical protein phrog_2120 tail length tape measure protein tail -1 55020 56240
YP_009056135.1 NC_024790_p6 hypothetical protein phrog_7648 unknown function unknown function 1 1970 2146
YP_009056139.1 NC_024790_p10 hypothetical protein phrog_7827 unknown function unknown function 1 3233 3547
YP_009056191.1 NC_024790_p62 hypothetical protein phrog_2130 unknown function unknown function -1 53092 53733
YP_009056210.1 NC_024790_p81 hypothetical protein phrog_12606 unknown function unknown function 1 70709 71044
YP_009056198.1 NC_024790_p69 hypothetical protein phrog_1356 holin lysis -1 60003 60263
YP_009056194.1 NC_024790_p65 hypothetical protein phrog_2346 unknown function unknown function -1 56260 56604
YP_009056192.1 NC_024790_p63 major capsid protein phrog_1357 major head protein head and packaging -1 53801 55003
YP_009056200.1 NC_024790_p71 tail fiber protein phrog_4217 tail protein tail -1 60838 62973
YP_009056150.1 NC_024790_p21 hypothetical protein phrog_7508 unknown function unknown function 1 8538 8726
YP_009056158.1 NC_024790_p29 hypothetical protein phrog_12812 unknown function unknown function 1 12661 13041
YP_009056205.1 NC_024790_p76 hypothetical protein phrog_7213 unknown function unknown function 1 68929 69207
YP_009056166.1 NC_024790_p37 rIIB-like protein phrog_2886 RIIB lysis inhibitor lysis 1 18036 20096
YP_009056173.1 NC_024790_p44 hypothetical protein phrog_5974 unknown function unknown function 1 26119 26424
YP_009056138.1 NC_024790_p9 hypothetical protein phrog_1972 unknown function unknown function 1 2979 3236
YP_009056197.1 NC_024790_p68 N-acetylmuramidase phrog_315 endolysin lysis -1 59378 60013
YP_009056185.1 NC_024790_p56 hypothetical protein phrog_872 unknown function unknown function 1 36115 36603
YP_009056186.1 NC_024790_p57 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 36642 46994
YP_009056141.1 NC_024790_p12 hypothetical protein phrog_37989 unknown function unknown function 1 3917 4165
YP_009056183.1 NC_024790_p54 hypothetical protein phrog_37481 unknown function unknown function 1 34200 34322
YP_009056144.1 NC_024790_p15 hypothetical protein phrog_14487 unknown function unknown function 1 4724 4984
YP_009056146.1 NC_024790_p17 hypothetical protein phrog_15352 unknown function unknown function 1 5846 6007
YP_009056148.1 NC_024790_p19 hypothetical protein phrog_12530 unknown function unknown function 1 7342 7524
YP_009056212.1 NC_024790_p83 hypothetical protein phrog_16338 unknown function unknown function 1 71393 71719
YP_009056151.1 NC_024790_p22 hypothetical protein phrog_7665 unknown function unknown function 1 8723 8908
YP_009056207.1 NC_024790_p78 hypothetical protein phrog_11661 unknown function unknown function 1 69773 70087
YP_009056171.1 NC_024790_p42 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 22837 26122
YP_009056201.1 NC_024790_p72 tail protein phrog_12242 tail protein tail -1 63023 65761
YP_009056147.1 NC_024790_p18 RNA polymerase subunit 2 phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 6064 7281
YP_009056155.1 NC_024790_p26 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 11505 12011
YP_009056175.1 NC_024790_p46 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 26891 27871
YP_009056157.1 NC_024790_p28 superinfection immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 12301 12543
YP_009056145.1 NC_024790_p16 RNA polymerase subunit 1 phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 5038 5856
YP_009056172.1 NC_024790_p43 HNH endonuclease inducing intron mobility phrog_7545 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24605 25135
YP_009056131.1 NC_024790_p2 hypothetical protein phrog_24403 unknown function unknown function 1 556 903
YP_009056189.1 NC_024790_p60 hypothetical protein phrog_2220 unknown function unknown function -1 49523 52177
YP_009056174.1 NC_024790_p45 hypothetical protein phrog_9919 unknown function unknown function 1 26424 26891
YP_009056130.1 NC_024790_p1 hypothetical protein phrog_5020 unknown function unknown function 1 142 465
YP_009056184.1 NC_024790_p55 hypothetical protein phrog_322 unknown function unknown function 1 35616 35996
YP_009056149.1 NC_024790_p20 structural protein phrog_2973 Hoc-like head decoration head and packaging 1 7599 8432
YP_009056179.1 NC_024790_p50 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31667 32470
YP_009056203.1 NC_024790_p74 hypothetical protein phrog_38 terminase large subunit head and packaging -1 66475 68064
YP_009056161.1 NC_024790_p32 hypothetical protein phrog_12633 unknown function unknown function 1 14425 14664
YP_009056165.1 NC_024790_p36 rIIA-like protein phrog_2979 RIIA lysis inhibitor lysis 1 15470 18031
YP_009056137.1 NC_024790_p8 hypothetical protein phrog_6887 unknown function unknown function 1 2761 2982
YP_009056177.1 NC_024790_p48 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30078 31626
YP_009056169.1 NC_024790_p40 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 20976 22286
YP_009056202.1 NC_024790_p73 structural protein phrog_2125 virion structural protein head and packaging -1 65758 66468
YP_009056180.1 NC_024790_p51 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32470 33051
YP_009056143.1 NC_024790_p14 hypothetical protein phrog_2072 unknown function unknown function 1 4338 4724
YP_009056136.1 NC_024790_p7 hypothetical protein phrog_20151 unknown function unknown function 1 2525 2764
YP_009056187.1 NC_024790_p58 structural protein phrog_6126 virion structural protein head and packaging -1 47089 49053
YP_009056142.1 NC_024790_p13 hypothetical protein phrog_13804 unknown function unknown function 1 4162 4347
YP_009056140.1 NC_024790_p11 hypothetical protein phrog_464 unknown function unknown function 1 3559 3924
YP_009056132.1 NC_024790_p3 hypothetical protein phrog_4099 unknown function unknown function 1 938 1423
YP_009056204.1 NC_024790_p75 hypothetical protein phrog_2109 unknown function unknown function -1 68057 68746
YP_009056160.1 NC_024790_p31 thymidylate synthase complementing protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 13484 14428
YP_009056134.1 NC_024790_p5 hypothetical protein phrog_5407 unknown function unknown function 1 1804 1977
YP_009056182.1 NC_024790_p53 hypothetical protein phrog_14773 unknown function unknown function 1 33707 33877
YP_009056156.1 NC_024790_p27 hypothetical protein phrog_7594 unknown function unknown function 1 12042 12227
YP_009056162.1 NC_024790_p33 hypothetical protein phrog_7900 unknown function unknown function 1 14724 14939
YP_009056154.1 NC_024790_p25 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10330 11505
YP_009056170.1 NC_024790_p41 hypothetical protein phrog_4881 unknown function unknown function 1 22297 22827
YP_009056163.1 NC_024790_p34 hypothetical protein phrog_9004 unknown function unknown function 1 14932 15258