Genomic map of Vibrio phage ICP2_2013_A_Haiti (NC_024791)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024791
Definition
Vibrio phage ICP2_2013_A_Haiti, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
50440
Host Name
Vibrio cholerae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
42.79
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009056252.1 NC_024791_p40 aerobic cobaltochelatase CobT subunit phrog_17276 aerobic cobaltochelatase CobT subunit moron, auxiliary metabolic gene and host takeover 1 32879 34594
YP_009056241.1 NC_024791_p29 hypothetical protein singleton unknown function unknown function 1 29108 29395
YP_009056225.1 NC_024791_p13 hypothetical protein phrog_18064 unknown function unknown function -1 12138 12545
YP_009056248.1 NC_024791_p36 hypothetical protein phrog_1965 unknown function unknown function 1 31380 31973
YP_009056219.1 NC_024791_p7 hypothetical protein phrog_8168 unknown function unknown function -1 7737 8180
YP_009056260.1 NC_024791_p48 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 38363 39619
YP_009056236.1 NC_024791_p24 hypothetical protein phrog_14064 tail fiber protein tail -1 22246 23835
YP_009056229.1 NC_024791_p17 hypothetical protein phrog_7931 unknown function unknown function -1 16019 16771
YP_009056222.1 NC_024791_p10 hypothetical protein phrog_9082 unknown function unknown function -1 10846 11046
YP_009056233.1 NC_024791_p21 hypothetical protein phrog_8035 unknown function unknown function -1 20340 20843
YP_009056215.1 NC_024791_p3 hypothetical protein phrog_3899 unknown function unknown function -1 940 1239
YP_009056234.1 NC_024791_p22 hypothetical protein phrog_2432 unknown function unknown function -1 20896 21174
YP_009056251.1 NC_024791_p39 hypothetical protein singleton unknown function unknown function 1 32612 32878
YP_009056247.1 NC_024791_p35 hypothetical protein phrog_16974 unknown function unknown function 1 30820 31311
YP_009056249.1 NC_024791_p37 hypothetical protein phrog_17353 unknown function unknown function 1 31978 32349
YP_009056255.1 NC_024791_p43 hypothetical protein phrog_16777 unknown function unknown function 1 36018 36272
YP_009056227.1 NC_024791_p15 hypothetical protein phrog_18422 unknown function unknown function -1 14449 14958
YP_009056261.1 NC_024791_p49 hypothetical protein singleton unknown function unknown function 1 39619 39867
YP_009056239.1 NC_024791_p27 hypothetical protein phrog_14737 unknown function unknown function 1 28125 28616
YP_009056256.1 NC_024791_p44 hypothetical protein phrog_19971 unknown function unknown function 1 36328 36618
YP_009056242.1 NC_024791_p30 hypothetical protein singleton unknown function unknown function 1 29462 29641
YP_009056243.1 NC_024791_p31 hypothetical protein phrog_18025 unknown function unknown function 1 29689 29940
YP_009056257.1 NC_024791_p45 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 36587 37399
YP_009056235.1 NC_024791_p23 hypothetical protein phrog_10745 unknown function unknown function -1 21187 22236
YP_009056217.1 NC_024791_p5 hypothetical protein phrog_17082 unknown function unknown function -1 1507 3468
YP_009056267.1 NC_024791_p55 hypothetical protein phrog_16403 unknown function unknown function 1 43199 43465
YP_009056259.1 NC_024791_p47 hypothetical protein phrog_16700 unknown function unknown function 1 37935 38366
YP_009056244.1 NC_024791_p32 hypothetical protein phrog_17158 unknown function unknown function 1 29959 30147
YP_009056221.1 NC_024791_p9 hypothetical protein phrog_8094 tail appendage tail -1 8661 10865
YP_009056246.1 NC_024791_p34 hypothetical protein phrog_18100 unknown function unknown function 1 30433 30765
YP_009056266.1 NC_024791_p54 hypothetical protein singleton unknown function unknown function 1 43021 43221
YP_009056216.1 NC_024791_p4 hypothetical protein phrog_21136 unknown function unknown function -1 1208 1504
YP_009056254.1 NC_024791_p42 hypothetical protein phrog_17083 unknown function unknown function 1 35735 36025
YP_009056231.1 NC_024791_p19 portal (connector) protein phrog_332 head-tail adaptor connector -1 17075 18820
YP_009056268.1 NC_024791_p56 hypothetical protein singleton unknown function unknown function 1 43467 43880
YP_009056213.1 NC_024791_p1 hypothetical protein phrog_2452 unknown function unknown function 1 172 468
YP_009056232.1 NC_024791_p20 hypothetical protein phrog_38 terminase large subunit head and packaging -1 18821 20347
YP_009056263.1 NC_024791_p51 hypothetical protein phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 41080 41964
YP_009056230.1 NC_024791_p18 hypothetical protein phrog_8956 unknown function unknown function -1 16825 17064
YP_009056240.1 NC_024791_p28 hypothetical protein phrog_14633 unknown function unknown function 1 28690 29097
YP_009056245.1 NC_024791_p33 hypothetical protein phrog_21997 unknown function unknown function 1 30217 30399
YP_009056264.1 NC_024791_p52 hypothetical protein phrog_18140 unknown function unknown function 1 42125 42619
YP_009056238.1 NC_024791_p26 hypothetical protein phrog_15513 unknown function unknown function 1 27865 28107
YP_009056262.1 NC_024791_p50 DNA polymerase phrog_9556 DNA polymerase DNA, RNA and nucleotide metabolism 1 39871 41070
YP_009056258.1 NC_024791_p46 hypothetical protein phrog_18510 unknown function unknown function 1 37390 37932
YP_009056250.1 NC_024791_p38 hypothetical protein phrog_18043 unknown function unknown function 1 32418 32594
YP_009056220.1 NC_024791_p8 hypothetical protein phrog_1249 acetyltransferase other -1 8260 8664
YP_009056226.1 NC_024791_p14 hypothetical protein phrog_17462 unknown function unknown function -1 12739 14364
YP_009056269.1 NC_024791_p57 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 43877 44722
YP_009056265.1 NC_024791_p53 hypothetical protein phrog_18273 unknown function unknown function 1 42678 43031
YP_009056218.1 NC_024791_p6 hypothetical protein phrog_12003 internal virion protein head and packaging -1 3474 7724
YP_009056237.1 NC_024791_p25 hypothetical protein phrog_17587 tail fiber protein tail -1 23847 26144
YP_009056224.1 NC_024791_p12 hypothetical protein phrog_4590 unknown function unknown function -1 11851 12138
YP_009056214.1 NC_024791_p2 hypothetical protein phrog_16830 unknown function unknown function -1 630 968
YP_009056253.1 NC_024791_p41 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover 1 34610 35725
YP_009056228.1 NC_024791_p16 hypothetical protein phrog_267 major head protein head and packaging -1 15028 15999
YP_009056223.1 NC_024791_p11 hypothetical protein phrog_7592 tail protein tail -1 11057 11851