Genomic map of Escherichia phage vB_EcoS_AHP42 (NC_024793)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_024793
Definition
Escherichia phage bV_EcoS_AHP42, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus.
DB of origin
REFSEQ
Length
46847
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
43.97
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009056551.1 NC_024793_p35 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism -1 29087 30010
YP_009056520.1 NC_024793_p4 portal protein phrog_146 portal protein head and packaging 1 2691 3965
YP_009056552.1 NC_024793_p36 transcriptional regulator phrog_2856 transcriptional regulator transcription regulation -1 30063 30536
YP_009056533.1 NC_024793_p17 hypothetical protein phrog_569 tail length tape measure protein tail 1 11002 11316
YP_009056543.1 NC_024793_p27 lipoprotein phrog_4281 unknown function unknown function -1 22223 22468
YP_009056583.1 NC_024793_p67 hypothetical protein phrog_12148 unknown function unknown function 1 44422 44517
YP_009056523.1 NC_024793_p7 hypothetical protein phrog_1989 unknown function unknown function 1 5803 6297
YP_009056542.1 NC_024793_p26 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover -1 21261 22223
YP_009056584.1 NC_024793_p68 hypothetical protein phrog_16612 unknown function unknown function 1 44502 44618
YP_009056565.1 NC_024793_p49 hypothetical protein phrog_4788 unknown function unknown function 1 36623 36796
YP_009056537.1 NC_024793_p21 minor tail protein phrog_18 minor tail protein tail 1 15144 15911
YP_009056582.1 NC_024793_p66 hypothetical protein phrog_8335 unknown function unknown function 1 44150 44383
YP_009056560.1 NC_024793_p44 hypothetical protein phrog_4596 unknown function unknown function 1 34062 34319
YP_009056570.1 NC_024793_p54 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 38349 39932
YP_009056579.1 NC_024793_p63 hypothetical protein phrog_4841 unknown function unknown function 1 42709 43251
YP_009056592.1 NC_024793_p76 hypothetical protein phrog_2919 unknown function unknown function 1 46599 46748
YP_009056545.1 NC_024793_p29 regulatory protein phrog_8235 anti-repressor transcription regulation 1 23056 23766
YP_009056569.1 NC_024793_p53 hypothetical protein phrog_2794 unknown function unknown function -1 38009 38344
YP_009056590.1 NC_024793_p74 hypothetical protein phrog_10885 unknown function unknown function 1 45785 45979
YP_009056547.1 NC_024793_p31 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 24117 25085
YP_009056588.1 NC_024793_p72 hypothetical protein phrog_3955 unknown function unknown function 1 45416 45550
YP_009056576.1 NC_024793_p60 hypothetical protein phrog_4548 unknown function unknown function -1 41392 41544
YP_009056571.1 NC_024793_p55 hypothetical protein phrog_8121 unknown function unknown function -1 39973 40152
YP_009056577.1 NC_024793_p61 hypothetical protein phrog_4448 unknown function unknown function -1 41545 41784
YP_009056538.1 NC_024793_p22 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15979 16467
YP_009056574.1 NC_024793_p58 hypothetical protein phrog_2684 unknown function unknown function -1 40636 40989
YP_009056555.1 NC_024793_p39 hypothetical protein phrog_6031 unknown function unknown function 1 33020 33214
YP_009056562.1 NC_024793_p46 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35672 36163
YP_009056587.1 NC_024793_p71 hypothetical protein phrog_11452 unknown function unknown function 1 45119 45412
YP_009056548.1 NC_024793_p32 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25142 25789
YP_009056531.1 NC_024793_p15 hypothetical protein phrog_179 tail terminator connector 1 9864 10262
YP_009056535.1 NC_024793_p19 tail tape measure protein phrog_24 tail length tape measure protein tail 1 11669 14722
YP_009056541.1 NC_024793_p25 tail fiber protein phrog_31 central tail fiber J tail 1 17843 21229
YP_009056527.1 NC_024793_p11 hypothetical protein phrog_2716 unknown function unknown function 1 8392 8640
YP_009056572.1 NC_024793_p56 hypothetical protein phrog_11986 unknown function unknown function -1 40235 40351
YP_009056518.1 NC_024793_p2 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 562 1077
YP_009056540.1 NC_024793_p24 tail assembly protein phrog_32 tail assembly protein tail 1 17196 17762
YP_009056580.1 NC_024793_p64 hypothetical protein phrog_7327 unknown function unknown function 1 43251 43811
YP_009056568.1 NC_024793_p52 Rz1 protein phrog_1804 Rz-like spanin lysis 1 37591 37995
YP_009056581.1 NC_024793_p65 hypothetical protein phrog_13316 unknown function unknown function 1 43869 44099
YP_009056578.1 NC_024793_p62 hypothetical protein phrog_5684 unknown function unknown function -1 41781 41999
YP_009056549.1 NC_024793_p33 single-stranded DNA binding protein Ssb phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 25837 26259
YP_009056586.1 NC_024793_p70 hypothetical protein phrog_1312 unknown function unknown function 1 44994 45122
YP_009056522.1 NC_024793_p6 prohead protease phrog_530 head maturation protease head and packaging 1 4691 5800
YP_009056561.1 NC_024793_p45 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 34470 35606
YP_009056554.1 NC_024793_p38 hypothetical protein phrog_824 unknown function unknown function 1 32572 32961
YP_009056526.1 NC_024793_p10 major capsid protein phrog_264 major head protein head and packaging 1 7357 8301
YP_009056558.1 NC_024793_p42 hypothetical protein phrog_2180 unknown function unknown function 1 33704 33829
YP_009056553.1 NC_024793_p37 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 30629 32572
YP_009056556.1 NC_024793_p40 hypothetical protein phrog_2676 unknown function unknown function 1 33214 33432
YP_009056529.1 NC_024793_p13 hypothetical protein phrog_161 head closure Hc1 connector 1 9085 9453
YP_009056573.1 NC_024793_p57 hypothetical protein phrog_926 unknown function unknown function -1 40430 40639
YP_009056559.1 NC_024793_p43 hypothetical protein phrog_2817 unknown function unknown function 1 33826 34065
YP_009056566.1 NC_024793_p50 holin phrog_2877 holin lysis 1 36912 37127
YP_009056530.1 NC_024793_p14 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 9446 9874
YP_009056534.1 NC_024793_p18 hypothetical protein phrog_680 tail length tape measure protein tail 1 11379 11633
YP_009056536.1 NC_024793_p20 minor tail protein phrog_14 minor tail protein tail 1 14754 15104
YP_009056591.1 NC_024793_p75 hypothetical protein phrog_16862 unknown function unknown function 1 46355 46570
YP_009056525.1 NC_024793_p9 hypothetical protein phrog_31616 unknown function unknown function 1 6902 7276
YP_009056521.1 NC_024793_p5 head morphogenesis protein phrog_324 head morphogenesis head and packaging 1 3946 4689
YP_009056528.1 NC_024793_p12 hypothetical protein phrog_302 virion structural protein head and packaging 1 8687 9088
YP_009056532.1 NC_024793_p16 major tail protein phrog_584 major tail protein tail 1 10277 10927
YP_009056567.1 NC_024793_p51 endolysin phrog_7 endolysin lysis 1 37127 37609
YP_009056550.1 NC_024793_p34 tail fiber phrog_4818 tail fiber protein tail -1 26291 29008
YP_009056557.1 NC_024793_p41 hypothetical protein phrog_3249 unknown function unknown function 1 33429 33629
YP_009056544.1 NC_024793_p28 hypothetical protein phrog_30596 unknown function unknown function 1 22786 22932
YP_009056519.1 NC_024793_p3 terminase large subunit phrog_38 terminase large subunit head and packaging 1 1334 2641
YP_009056563.1 NC_024793_p47 hypothetical protein phrog_7411 unknown function unknown function 1 36237 36422
YP_009056585.1 NC_024793_p69 hypothetical protein phrog_2452 unknown function unknown function 1 44622 44921
YP_009056517.1 NC_024793_p1 terminase small subunit phrog_606 terminase small subunit head and packaging 1 1 516
YP_009056575.1 NC_024793_p59 hypothetical protein phrog_12926 unknown function unknown function -1 41015 41317
YP_009056524.1 NC_024793_p8 hypothetical protein phrog_22681 DNA polymerase DNA, RNA and nucleotide metabolism 1 6392 6865
YP_009056539.1 NC_024793_p23 minor tail protein phrog_30 minor tail protein tail 1 16469 17215
YP_009056589.1 NC_024793_p73 fusion protein phrog_303 unknown function unknown function 1 45553 45792
YP_009056564.1 NC_024793_p48 hypothetical protein phrog_10052 unknown function unknown function 1 36422 36610
YP_009056546.1 NC_024793_p30 hypothetical protein phrog_5247 unknown function unknown function 1 23919 24113