| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_024793 |
Definition |
Escherichia phage bV_EcoS_AHP42, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus. |
DB of origin |
REFSEQ |
Length |
46847 |
Host Name |
Escherichia |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
43.97 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009056551.1 | NC_024793_p35 | DNA primase | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 29087 | 30010 |
| YP_009056520.1 | NC_024793_p4 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 2691 | 3965 |
| YP_009056552.1 | NC_024793_p36 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 30063 | 30536 |
| YP_009056533.1 | NC_024793_p17 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 11002 | 11316 |
| YP_009056543.1 | NC_024793_p27 | lipoprotein | phrog_4281 | unknown function | unknown function | -1 | 22223 | 22468 |
| YP_009056583.1 | NC_024793_p67 | hypothetical protein | phrog_12148 | unknown function | unknown function | 1 | 44422 | 44517 |
| YP_009056523.1 | NC_024793_p7 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 5803 | 6297 |
| YP_009056542.1 | NC_024793_p26 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 21261 | 22223 |
| YP_009056584.1 | NC_024793_p68 | hypothetical protein | phrog_16612 | unknown function | unknown function | 1 | 44502 | 44618 |
| YP_009056565.1 | NC_024793_p49 | hypothetical protein | phrog_4788 | unknown function | unknown function | 1 | 36623 | 36796 |
| YP_009056537.1 | NC_024793_p21 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 15144 | 15911 |
| YP_009056582.1 | NC_024793_p66 | hypothetical protein | phrog_8335 | unknown function | unknown function | 1 | 44150 | 44383 |
| YP_009056560.1 | NC_024793_p44 | hypothetical protein | phrog_4596 | unknown function | unknown function | 1 | 34062 | 34319 |
| YP_009056570.1 | NC_024793_p54 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 38349 | 39932 |
| YP_009056579.1 | NC_024793_p63 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 42709 | 43251 |
| YP_009056592.1 | NC_024793_p76 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 46599 | 46748 |
| YP_009056545.1 | NC_024793_p29 | regulatory protein | phrog_8235 | anti-repressor | transcription regulation | 1 | 23056 | 23766 |
| YP_009056569.1 | NC_024793_p53 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 38009 | 38344 |
| YP_009056590.1 | NC_024793_p74 | hypothetical protein | phrog_10885 | unknown function | unknown function | 1 | 45785 | 45979 |
| YP_009056547.1 | NC_024793_p31 | exodeoxyribonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 24117 | 25085 |
| YP_009056588.1 | NC_024793_p72 | hypothetical protein | phrog_3955 | unknown function | unknown function | 1 | 45416 | 45550 |
| YP_009056576.1 | NC_024793_p60 | hypothetical protein | phrog_4548 | unknown function | unknown function | -1 | 41392 | 41544 |
| YP_009056571.1 | NC_024793_p55 | hypothetical protein | phrog_8121 | unknown function | unknown function | -1 | 39973 | 40152 |
| YP_009056577.1 | NC_024793_p61 | hypothetical protein | phrog_4448 | unknown function | unknown function | -1 | 41545 | 41784 |
| YP_009056538.1 | NC_024793_p22 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15979 | 16467 |
| YP_009056574.1 | NC_024793_p58 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 40636 | 40989 |
| YP_009056555.1 | NC_024793_p39 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 33020 | 33214 |
| YP_009056562.1 | NC_024793_p46 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35672 | 36163 |
| YP_009056587.1 | NC_024793_p71 | hypothetical protein | phrog_11452 | unknown function | unknown function | 1 | 45119 | 45412 |
| YP_009056548.1 | NC_024793_p32 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 25142 | 25789 |
| YP_009056531.1 | NC_024793_p15 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 9864 | 10262 |
| YP_009056535.1 | NC_024793_p19 | tail tape measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 11669 | 14722 |
| YP_009056541.1 | NC_024793_p25 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 17843 | 21229 |
| YP_009056527.1 | NC_024793_p11 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 8392 | 8640 |
| YP_009056572.1 | NC_024793_p56 | hypothetical protein | phrog_11986 | unknown function | unknown function | -1 | 40235 | 40351 |
| YP_009056518.1 | NC_024793_p2 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 562 | 1077 |
| YP_009056540.1 | NC_024793_p24 | tail assembly protein | phrog_32 | tail assembly protein | tail | 1 | 17196 | 17762 |
| YP_009056580.1 | NC_024793_p64 | hypothetical protein | phrog_7327 | unknown function | unknown function | 1 | 43251 | 43811 |
| YP_009056568.1 | NC_024793_p52 | Rz1 protein | phrog_1804 | Rz-like spanin | lysis | 1 | 37591 | 37995 |
| YP_009056581.1 | NC_024793_p65 | hypothetical protein | phrog_13316 | unknown function | unknown function | 1 | 43869 | 44099 |
| YP_009056578.1 | NC_024793_p62 | hypothetical protein | phrog_5684 | unknown function | unknown function | -1 | 41781 | 41999 |
| YP_009056549.1 | NC_024793_p33 | single-stranded DNA binding protein Ssb | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 25837 | 26259 |
| YP_009056586.1 | NC_024793_p70 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 44994 | 45122 |
| YP_009056522.1 | NC_024793_p6 | prohead protease | phrog_530 | head maturation protease | head and packaging | 1 | 4691 | 5800 |
| YP_009056561.1 | NC_024793_p45 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34470 | 35606 |
| YP_009056554.1 | NC_024793_p38 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 32572 | 32961 |
| YP_009056526.1 | NC_024793_p10 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 7357 | 8301 |
| YP_009056558.1 | NC_024793_p42 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 33704 | 33829 |
| YP_009056553.1 | NC_024793_p37 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 30629 | 32572 |
| YP_009056556.1 | NC_024793_p40 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 33214 | 33432 |
| YP_009056529.1 | NC_024793_p13 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 9085 | 9453 |
| YP_009056573.1 | NC_024793_p57 | hypothetical protein | phrog_926 | unknown function | unknown function | -1 | 40430 | 40639 |
| YP_009056559.1 | NC_024793_p43 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 33826 | 34065 |
| YP_009056566.1 | NC_024793_p50 | holin | phrog_2877 | holin | lysis | 1 | 36912 | 37127 |
| YP_009056530.1 | NC_024793_p14 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 9446 | 9874 |
| YP_009056534.1 | NC_024793_p18 | hypothetical protein | phrog_680 | tail length tape measure protein | tail | 1 | 11379 | 11633 |
| YP_009056536.1 | NC_024793_p20 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 14754 | 15104 |
| YP_009056591.1 | NC_024793_p75 | hypothetical protein | phrog_16862 | unknown function | unknown function | 1 | 46355 | 46570 |
| YP_009056525.1 | NC_024793_p9 | hypothetical protein | phrog_31616 | unknown function | unknown function | 1 | 6902 | 7276 |
| YP_009056521.1 | NC_024793_p5 | head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | 1 | 3946 | 4689 |
| YP_009056528.1 | NC_024793_p12 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 8687 | 9088 |
| YP_009056532.1 | NC_024793_p16 | major tail protein | phrog_584 | major tail protein | tail | 1 | 10277 | 10927 |
| YP_009056567.1 | NC_024793_p51 | endolysin | phrog_7 | endolysin | lysis | 1 | 37127 | 37609 |
| YP_009056550.1 | NC_024793_p34 | tail fiber | phrog_4818 | tail fiber protein | tail | -1 | 26291 | 29008 |
| YP_009056557.1 | NC_024793_p41 | hypothetical protein | phrog_3249 | unknown function | unknown function | 1 | 33429 | 33629 |
| YP_009056544.1 | NC_024793_p28 | hypothetical protein | phrog_30596 | unknown function | unknown function | 1 | 22786 | 22932 |
| YP_009056519.1 | NC_024793_p3 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 1334 | 2641 |
| YP_009056563.1 | NC_024793_p47 | hypothetical protein | phrog_7411 | unknown function | unknown function | 1 | 36237 | 36422 |
| YP_009056585.1 | NC_024793_p69 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 44622 | 44921 |
| YP_009056517.1 | NC_024793_p1 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 1 | 516 |
| YP_009056575.1 | NC_024793_p59 | hypothetical protein | phrog_12926 | unknown function | unknown function | -1 | 41015 | 41317 |
| YP_009056524.1 | NC_024793_p8 | hypothetical protein | phrog_22681 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6392 | 6865 |
| YP_009056539.1 | NC_024793_p23 | minor tail protein | phrog_30 | minor tail protein | tail | 1 | 16469 | 17215 |
| YP_009056589.1 | NC_024793_p73 | fusion protein | phrog_303 | unknown function | unknown function | 1 | 45553 | 45792 |
| YP_009056564.1 | NC_024793_p48 | hypothetical protein | phrog_10052 | unknown function | unknown function | 1 | 36422 | 36610 |
| YP_009056546.1 | NC_024793_p30 | hypothetical protein | phrog_5247 | unknown function | unknown function | 1 | 23919 | 24113 |