Genomic map of Ralstonia phage RSY1 (NC_025115)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025115
Definition
Ralstonia phage RSY1 DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Aresaunavirus; Ralstonia virus RSY1.
DB of origin
REFSEQ
Length
40002
Host Name
Ralstonia solanacearum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
64.82
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009067080.1 NC_025115_p3 protein of an unannotated phage phrog_32974 unknown function unknown function 1 3625 4494
YP_009067114.1 NC_025115_p37 protein of an unannotated phage singleton unknown function unknown function -1 31801 32172
YP_009067125.1 NC_025115_p48 protein of an unannotated phage phrog_66 excisionase and transcriptional regulator integration and excision 1 38222 38437
YP_009067115.1 NC_025115_p38 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation -1 32298 33104
YP_009067121.1 NC_025115_p44 protein of an unannotated phage phrog_24813 unknown function unknown function 1 34809 35024
YP_009067124.1 NC_025115_p47 protein of an unannotated phage phrog_1139 DNA primase DNA, RNA and nucleotide metabolism 1 35520 38225
YP_009067097.1 NC_025115_p20 protein of an unannotated phage phrog_3598 transposase integration and excision -1 17718 18683
YP_009067095.1 NC_025115_p18 protein of an unannotated phage phrog_26 tail completion or Neck1 protein connector 1 16522 16968
YP_009067103.1 NC_025115_p26 protein of an unannotated phage phrog_1807 tail fiber protein tail 1 23025 23777
YP_009067109.1 NC_025115_p32 protein of an unannotated phage phrog_28 tail length tape measure protein tail 1 27422 29167
YP_009067099.1 NC_025115_p22 protein of an unannotated phage phrog_43 baseplate wedge subunit tail 1 19484 19822
YP_009067100.1 NC_025115_p23 protein of an unannotated phage phrog_6 baseplate wedge subunit tail 1 19825 20733
YP_009067082.1 NC_025115_p5 protein of an unannotated phage singleton unknown function unknown function 1 5342 7582
YP_009067092.1 NC_025115_p15 protein of an unannotated phage phrog_1224 endolysin head and packaging 1 14791 15597
YP_009067126.1 NC_025115_p49 protein of an unannotated phage phrog_1 integrase integration and excision -1 38412 39647
YP_009067083.1 NC_025115_p6 protein of an unannotated phage phrog_68 portal protein head and packaging -1 7649 8734
YP_009067106.1 NC_025115_p29 protein of an unannotated phage phrog_55 head closure connector 1 25544 26053
YP_009067105.1 NC_025115_p28 protein of an unannotated phage phrog_23 tail sheath tail 1 24337 25512
YP_009067110.1 NC_025115_p33 protein of an unannotated phage phrog_76 tail protein tail 1 29170 29592
YP_009067085.1 NC_025115_p8 protein of an unannotated phage phrog_73 head scaffolding protein head and packaging 1 10656 11495
YP_009067087.1 NC_025115_p10 protein of an unannotated phage phrog_74 terminase small subunit head and packaging 1 12562 13284
YP_009067086.1 NC_025115_p9 protein of an unannotated phage phrog_70 major head protein head and packaging 1 11549 12565
YP_009067102.1 NC_025115_p25 protein of an unannotated phage phrog_327 tail protein tail 1 21348 23012
YP_009067090.1 NC_025115_p13 protein of an unannotated phage phrog_198 holin lysis 1 14082 14486
YP_009067089.1 NC_025115_p12 protein of an unannotated phage phrog_46 baseplate hub tail 1 13860 14066
YP_009067084.1 NC_025115_p7 protein of an unannotated phage phrog_2 terminase large subunit head and packaging -1 8731 10512
YP_009067094.1 NC_025115_p17 protein of an unannotated phage phrog_65 tail terminator connector 1 16091 16525
YP_009067116.1 NC_025115_p39 protein of an unannotated phage phrog_9850 unknown function unknown function 1 33287 33481
YP_009067123.1 NC_025115_p46 protein of an unannotated phage phrog_6236 unknown function unknown function 1 35259 35465
YP_009067111.1 NC_025115_p34 protein of an unannotated phage phrog_52 tail protein tail 1 29589 30689
YP_009067122.1 NC_025115_p45 protein of an unannotated phage phrog_22312 membrane protein moron, auxiliary metabolic gene and host takeover 1 35021 35266
YP_009067119.1 NC_025115_p42 protein of an unannotated phage phrog_24608 unknown function unknown function 1 34409 34648
YP_009067108.1 NC_025115_p31 protein of an unannotated phage phrog_10546 unknown function unknown function 1 26551 27429
YP_009067091.1 NC_025115_p14 protein of an unannotated phage phrog_217 holin lysis 1 14483 14794
YP_009067104.1 NC_025115_p27 protein of an unannotated phage phrog_1128 enoyl-CoA hydratase/carnithine racemase-like moron, auxiliary metabolic gene and host takeover 1 23774 24238
YP_009067101.1 NC_025115_p24 protein of an unannotated phage phrog_48 tail protein tail 1 20726 21343
YP_009067118.1 NC_025115_p41 protein of an unannotated phage phrog_5060 anti-repressor Ant transcription regulation 1 33842 34396
YP_009067093.1 NC_025115_p16 protein of an unannotated phage phrog_4952 signal peptide motif other 1 15594 16094
YP_009067088.1 NC_025115_p11 protein of an unannotated phage phrog_71 head-tail adaptor Ad1 connector 1 13333 13860
YP_009067107.1 NC_025115_p30 protein of an unannotated phage singleton unknown function unknown function 1 26084 26554
YP_009067096.1 NC_025115_p19 protein of an unannotated phage singleton unknown function unknown function -1 16991 17443
YP_009067098.1 NC_025115_p21 protein of an unannotated phage phrog_11 baseplate spike tail 1 18861 19478
YP_009067112.1 NC_025115_p35 protein of an unannotated phage phrog_3008 DNA methyltransferase other 1 30713 31072
YP_009067079.1 NC_025115_p2 protein of an unannotated phage phrog_34729 unknown function unknown function 1 960 3620
YP_009067113.1 NC_025115_p36 protein of an unannotated phage singleton unknown function unknown function 1 31077 31628
YP_009067117.1 NC_025115_p40 protein of an unannotated phage phrog_603 transcriptional regulator transcription regulation 1 33478 33726
YP_009067081.1 NC_025115_p4 protein of an unannotated phage phrog_32974 unknown function unknown function 1 4491 5336
YP_009067120.1 NC_025115_p43 protein of an unannotated phage phrog_27455 unknown function unknown function 1 34645 34812
YP_009067078.1 NC_025115_p1 protein of an unannotated phage singleton unknown function unknown function 1 546 842