| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_025433 |
Definition |
Mycobacteriophage Taj, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
58550 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
110 |
%GC |
61.86 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009100204.1 | NC_025433_p92 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 52011 | 52295 |
| YP_009100184.1 | NC_025433_p72 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 45051 | 45221 |
| YP_009100154.1 | NC_025433_p42 | hypothetical protein | phrog_8497 | unknown function | unknown function | -1 | 31713 | 31880 |
| YP_009100113.1 | NC_025433_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_009100135.1 | NC_025433_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23664 | 24302 |
| YP_009100137.1 | NC_025433_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25283 | 25474 |
| YP_009100222.1 | NC_025433_p110 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58080 | 58430 |
| YP_009100168.1 | NC_025433_p56 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 38142 | 38369 |
| YP_009100192.1 | NC_025433_p80 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 48332 | 48466 |
| YP_009100119.1 | NC_025433_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5883 | 6449 |
| YP_009100165.1 | NC_025433_p53 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 37144 | 37428 |
| YP_009100211.1 | NC_025433_p99 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 53546 | 53665 |
| YP_009100124.1 | NC_025433_p12 | hypothetical protein | phrog_978 | tail assembly chaperone | tail | 1 | 8577 | 9513 |
| YP_009100177.1 | NC_025433_p65 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 42337 | 42495 |
| YP_009100143.1 | NC_025433_p31 | hypothetical protein | phrog_102 | endolysin | lysis | 1 | 27685 | 28683 |
| YP_009100160.1 | NC_025433_p48 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 35222 | 35455 |
| YP_009100117.1 | NC_025433_p5 | hypothetical protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4393 | 5043 |
| YP_009100214.1 | NC_025433_p102 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 54619 | 54786 |
| YP_009100188.1 | NC_025433_p76 | hypothetical protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 46019 | 46426 |
| YP_009100129.1 | NC_025433_p17 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 16585 | 17433 |
| YP_009100122.1 | NC_025433_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7097 | 7504 |
| YP_009100144.1 | NC_025433_p32 | hypothetical protein | phrog_443 | holin | lysis | 1 | 28693 | 28926 |
| YP_009100151.1 | NC_025433_p39 | hypothetical protein | phrog_5323 | unknown function | unknown function | -1 | 31177 | 31350 |
| YP_009100134.1 | NC_025433_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23395 | 23649 |
| YP_009100185.1 | NC_025433_p73 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 45199 | 45354 |
| YP_009100172.1 | NC_025433_p60 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40382 | 40729 |
| YP_009100147.1 | NC_025433_p35 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29541 | 30362 |
| YP_009100195.1 | NC_025433_p83 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 49578 | 49769 |
| YP_009100150.1 | NC_025433_p38 | hypothetical protein | phrog_7977 | unknown function | unknown function | -1 | 30923 | 31180 |
| YP_009100126.1 | NC_025433_p14 | hypothetical protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9532 | 13059 |
| YP_009100118.1 | NC_025433_p6 | hypothetical protein | phrog_267 | major head protein | head and packaging | 1 | 5062 | 5883 |
| YP_009100187.1 | NC_025433_p75 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 45756 | 46022 |
| YP_009100162.1 | NC_025433_p50 | hypothetical protein | phrog_2089 | unknown function | unknown function | 1 | 35824 | 36300 |
| YP_009100146.1 | NC_025433_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29294 | 29554 |
| YP_009100163.1 | NC_025433_p51 | hypothetical protein | phrog_23624 | unknown function | unknown function | 1 | 36359 | 36796 |
| YP_009100215.1 | NC_025433_p103 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54799 | 54996 |
| YP_009100159.1 | NC_025433_p47 | hypothetical protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 34483 | 35103 |
| YP_009100156.1 | NC_025433_p44 | hypothetical protein | phrog_20124 | unknown function | unknown function | -1 | 32193 | 32333 |
| YP_009100171.1 | NC_025433_p59 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 40104 | 40385 |
| YP_009100149.1 | NC_025433_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30663 | 30755 |
| YP_009100178.1 | NC_025433_p66 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 42495 | 42725 |
| YP_009100180.1 | NC_025433_p68 | hypothetical protein | phrog_1366 | unknown function | unknown function | 1 | 42961 | 43842 |
| YP_009100164.1 | NC_025433_p52 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36840 | 37058 |
| YP_009100175.1 | NC_025433_p63 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 41748 | 41978 |
| YP_009100210.1 | NC_025433_p98 | hypothetical protein | phrog_7643 | unknown function | unknown function | 1 | 53211 | 53549 |
| YP_009100206.1 | NC_025433_p94 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 52417 | 52608 |
| YP_009100205.1 | NC_025433_p93 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 52292 | 52420 |
| YP_009100174.1 | NC_025433_p62 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 41214 | 41699 |
| YP_009100209.1 | NC_025433_p97 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 53077 | 53214 |
| YP_009100123.1 | NC_025433_p11 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 7631 | 8440 |
| YP_009100128.1 | NC_025433_p16 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 14839 | 16548 |
| YP_009100173.1 | NC_025433_p61 | hypothetical protein | phrog_1333 | unknown function | unknown function | 1 | 40729 | 41217 |
| YP_009100136.1 | NC_025433_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24299 | 25279 |
| YP_009100132.1 | NC_025433_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21847 | 23013 |
| YP_009100200.1 | NC_025433_p88 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50947 | 51231 |
| YP_009100221.1 | NC_025433_p109 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57457 | 58080 |
| YP_009100125.1 | NC_025433_p13 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | 1 | 8577 | 9128 |
| YP_009100142.1 | NC_025433_p30 | hypothetical protein | phrog_700 | endolysin | lysis | 1 | 26531 | 27685 |
| YP_009100198.1 | NC_025433_p86 | hypothetical protein | phrog_30256 | unknown function | unknown function | 1 | 50334 | 50444 |
| YP_009100213.1 | NC_025433_p101 | hypothetical protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 54398 | 54622 |
| YP_009100218.1 | NC_025433_p106 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55638 | 55799 |
| YP_009100114.1 | NC_025433_p2 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| YP_009100130.1 | NC_025433_p18 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 17430 | 19967 |
| YP_009100219.1 | NC_025433_p107 | hypothetical protein | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55815 | 57251 |
| YP_009100186.1 | NC_025433_p74 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 45347 | 45697 |
| YP_009100115.1 | NC_025433_p3 | hypothetical protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| YP_009100166.1 | NC_025433_p54 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 37445 | 37957 |
| YP_009100208.1 | NC_025433_p96 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52898 | 53077 |
| YP_009100196.1 | NC_025433_p84 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 49766 | 49960 |
| YP_009100140.1 | NC_025433_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26060 | 26227 |
| YP_009100145.1 | NC_025433_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28923 | 29297 |
| YP_009100148.1 | NC_025433_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30359 | 30670 |
| YP_009100212.1 | NC_025433_p100 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53662 | 54288 |
| YP_009100193.1 | NC_025433_p81 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48470 | 49321 |
| YP_009100116.1 | NC_025433_p4 | hypothetical protein | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| YP_009100182.1 | NC_025433_p70 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44021 | 44383 |
| YP_009100127.1 | NC_025433_p15 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 13060 | 14769 |
| YP_009100131.1 | NC_025433_p19 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19964 | 21850 |
| YP_009100190.1 | NC_025433_p78 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 46564 | 46665 |
| YP_009100170.1 | NC_025433_p58 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 39117 | 40025 |
| YP_009100167.1 | NC_025433_p55 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37954 | 38145 |
| YP_009100189.1 | NC_025433_p77 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 46419 | 46571 |
| YP_009100220.1 | NC_025433_p108 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57248 | 57460 |
| YP_009100176.1 | NC_025433_p64 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41975 | 42340 |
| YP_009100179.1 | NC_025433_p67 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 42722 | 42964 |
| YP_009100201.1 | NC_025433_p89 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 51224 | 51349 |
| YP_009100202.1 | NC_025433_p90 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 51483 | 51854 |
| YP_009100169.1 | NC_025433_p57 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 38366 | 39082 |
| YP_009100138.1 | NC_025433_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25626 | 25910 |
| YP_009100157.1 | NC_025433_p45 | hypothetical protein | phrog_1 | integrase | integration and excision | 1 | 32606 | 33709 |
| YP_009100216.1 | NC_025433_p104 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54993 | 55406 |
| YP_009100199.1 | NC_025433_p87 | hypothetical protein | phrog_5429 | DNA repair protein | DNA, RNA and nucleotide metabolism | 1 | 50441 | 50950 |
| YP_009100217.1 | NC_025433_p105 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55403 | 55645 |
| YP_009100155.1 | NC_025433_p43 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31936 | 32148 |
| YP_009100203.1 | NC_025433_p91 | hypothetical protein | phrog_7842 | unknown function | unknown function | 1 | 51841 | 52014 |
| YP_009100133.1 | NC_025433_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23031 | 23372 |
| YP_009100183.1 | NC_025433_p71 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 44380 | 45054 |
| YP_009100161.1 | NC_025433_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35486 | 35827 |
| YP_009100207.1 | NC_025433_p95 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 52605 | 52901 |
| YP_009100181.1 | NC_025433_p69 | hypothetical protein | phrog_17733 | unknown function | unknown function | 1 | 43839 | 44024 |
| YP_009100139.1 | NC_025433_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25917 | 26063 |
| YP_009100197.1 | NC_025433_p85 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 49957 | 50334 |
| YP_009100191.1 | NC_025433_p79 | hypothetical protein | phrog_67 | DNA methyltransferase | other | 1 | 46662 | 48335 |
| YP_009100158.1 | NC_025433_p46 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33771 | 34220 |
| YP_009100152.1 | NC_025433_p40 | hypothetical protein | phrog_2864 | unknown function | unknown function | -1 | 31347 | 31514 |
| YP_009100153.1 | NC_025433_p41 | hypothetical protein | phrog_20138 | unknown function | unknown function | -1 | 31514 | 31684 |
| YP_009100121.1 | NC_025433_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6781 | 7110 |
| YP_009100194.1 | NC_025433_p82 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49318 | 49581 |
| YP_009100120.1 | NC_025433_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6446 | 6778 |
| YP_009100141.1 | NC_025433_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26262 | 26534 |