Genomic map of Mycobacterium phage Taj (NC_025433)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025433
Definition
Mycobacteriophage Taj, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
58550
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
110
%GC
61.86
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009100204.1 NC_025433_p92 hypothetical protein phrog_647 unknown function unknown function 1 52011 52295
YP_009100184.1 NC_025433_p72 hypothetical protein phrog_2070 unknown function unknown function 1 45051 45221
YP_009100154.1 NC_025433_p42 hypothetical protein phrog_8497 unknown function unknown function -1 31713 31880
YP_009100113.1 NC_025433_p1 hypothetical protein phrog_226 minor tail protein tail 1 109 564
YP_009100135.1 NC_025433_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23664 24302
YP_009100137.1 NC_025433_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25283 25474
YP_009100222.1 NC_025433_p110 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58080 58430
YP_009100168.1 NC_025433_p56 hypothetical protein phrog_780 unknown function unknown function 1 38142 38369
YP_009100192.1 NC_025433_p80 hypothetical protein phrog_2451 unknown function unknown function 1 48332 48466
YP_009100119.1 NC_025433_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
YP_009100165.1 NC_025433_p53 hypothetical protein phrog_1840 excisionase integration and excision 1 37144 37428
YP_009100211.1 NC_025433_p99 hypothetical protein phrog_4126 unknown function unknown function 1 53546 53665
YP_009100124.1 NC_025433_p12 hypothetical protein phrog_978 tail assembly chaperone tail 1 8577 9513
YP_009100177.1 NC_025433_p65 hypothetical protein phrog_2078 unknown function unknown function 1 42337 42495
YP_009100143.1 NC_025433_p31 hypothetical protein phrog_102 endolysin lysis 1 27685 28683
YP_009100160.1 NC_025433_p48 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 35222 35455
YP_009100117.1 NC_025433_p5 hypothetical protein phrog_2592 head scaffolding protein head and packaging 1 4393 5043
YP_009100214.1 NC_025433_p102 hypothetical protein phrog_1869 unknown function unknown function 1 54619 54786
YP_009100188.1 NC_025433_p76 hypothetical protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 46019 46426
YP_009100129.1 NC_025433_p17 hypothetical protein phrog_732 minor tail protein tail 1 16585 17433
YP_009100122.1 NC_025433_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7097 7504
YP_009100144.1 NC_025433_p32 hypothetical protein phrog_443 holin lysis 1 28693 28926
YP_009100151.1 NC_025433_p39 hypothetical protein phrog_5323 unknown function unknown function -1 31177 31350
YP_009100134.1 NC_025433_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23395 23649
YP_009100185.1 NC_025433_p73 hypothetical protein phrog_1311 unknown function unknown function 1 45199 45354
YP_009100172.1 NC_025433_p60 hypothetical protein phrog_658 unknown function unknown function 1 40382 40729
YP_009100147.1 NC_025433_p35 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29541 30362
YP_009100195.1 NC_025433_p83 hypothetical protein phrog_7196 unknown function unknown function 1 49578 49769
YP_009100150.1 NC_025433_p38 hypothetical protein phrog_7977 unknown function unknown function -1 30923 31180
YP_009100126.1 NC_025433_p14 hypothetical protein phrog_1942 tail length tape measure protein tail 1 9532 13059
YP_009100118.1 NC_025433_p6 hypothetical protein phrog_267 major head protein head and packaging 1 5062 5883
YP_009100187.1 NC_025433_p75 hypothetical protein phrog_2060 DNA methyltransferase other 1 45756 46022
YP_009100162.1 NC_025433_p50 hypothetical protein phrog_2089 unknown function unknown function 1 35824 36300
YP_009100146.1 NC_025433_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29294 29554
YP_009100163.1 NC_025433_p51 hypothetical protein phrog_23624 unknown function unknown function 1 36359 36796
YP_009100215.1 NC_025433_p103 hypothetical protein phrog_1694 unknown function unknown function 1 54799 54996
YP_009100159.1 NC_025433_p47 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 34483 35103
YP_009100156.1 NC_025433_p44 hypothetical protein phrog_20124 unknown function unknown function -1 32193 32333
YP_009100171.1 NC_025433_p59 hypothetical protein phrog_1849 unknown function unknown function 1 40104 40385
YP_009100149.1 NC_025433_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30663 30755
YP_009100178.1 NC_025433_p66 hypothetical protein phrog_1834 unknown function unknown function 1 42495 42725
YP_009100180.1 NC_025433_p68 hypothetical protein phrog_1366 unknown function unknown function 1 42961 43842
YP_009100164.1 NC_025433_p52 hypothetical protein phrog_2025 unknown function unknown function 1 36840 37058
YP_009100175.1 NC_025433_p63 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 41748 41978
YP_009100210.1 NC_025433_p98 hypothetical protein phrog_7643 unknown function unknown function 1 53211 53549
YP_009100206.1 NC_025433_p94 hypothetical protein phrog_1901 unknown function unknown function 1 52417 52608
YP_009100205.1 NC_025433_p93 hypothetical protein phrog_4152 unknown function unknown function 1 52292 52420
YP_009100174.1 NC_025433_p62 hypothetical protein phrog_2096 unknown function unknown function 1 41214 41699
YP_009100209.1 NC_025433_p97 hypothetical protein phrog_1545 unknown function unknown function 1 53077 53214
YP_009100123.1 NC_025433_p11 hypothetical protein phrog_476 major tail protein tail 1 7631 8440
YP_009100128.1 NC_025433_p16 hypothetical protein phrog_110 minor tail protein tail 1 14839 16548
YP_009100173.1 NC_025433_p61 hypothetical protein phrog_1333 unknown function unknown function 1 40729 41217
YP_009100136.1 NC_025433_p24 hypothetical protein phrog_754 minor tail protein tail 1 24299 25279
YP_009100132.1 NC_025433_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21847 23013
YP_009100200.1 NC_025433_p88 hypothetical protein phrog_647 unknown function unknown function 1 50947 51231
YP_009100221.1 NC_025433_p109 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57457 58080
YP_009100125.1 NC_025433_p13 hypothetical protein phrog_621 tail assembly chaperone tail 1 8577 9128
YP_009100142.1 NC_025433_p30 hypothetical protein phrog_700 endolysin lysis 1 26531 27685
YP_009100198.1 NC_025433_p86 hypothetical protein phrog_30256 unknown function unknown function 1 50334 50444
YP_009100213.1 NC_025433_p101 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 54398 54622
YP_009100218.1 NC_025433_p106 hypothetical protein phrog_2057 unknown function unknown function 1 55638 55799
YP_009100114.1 NC_025433_p2 hypothetical protein phrog_9 terminase large subunit head and packaging 1 587 2224
YP_009100130.1 NC_025433_p18 hypothetical protein phrog_346 minor tail protein tail 1 17430 19967
YP_009100219.1 NC_025433_p107 hypothetical protein phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55815 57251
YP_009100186.1 NC_025433_p74 hypothetical protein phrog_3821 unknown function unknown function 1 45347 45697
YP_009100115.1 NC_025433_p3 hypothetical protein phrog_104 portal protein head and packaging 1 2255 3625
YP_009100166.1 NC_025433_p54 hypothetical protein phrog_2021 unknown function unknown function 1 37445 37957
YP_009100208.1 NC_025433_p96 hypothetical protein phrog_1091 unknown function unknown function 1 52898 53077
YP_009100196.1 NC_025433_p84 hypothetical protein phrog_1943 unknown function unknown function 1 49766 49960
YP_009100140.1 NC_025433_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26060 26227
YP_009100145.1 NC_025433_p33 hypothetical protein phrog_404 minor tail protein tail 1 28923 29297
YP_009100148.1 NC_025433_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30359 30670
YP_009100212.1 NC_025433_p100 hypothetical protein phrog_1467 unknown function unknown function 1 53662 54288
YP_009100193.1 NC_025433_p81 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 48470 49321
YP_009100116.1 NC_025433_p4 hypothetical protein phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_009100182.1 NC_025433_p70 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44021 44383
YP_009100127.1 NC_025433_p15 hypothetical protein phrog_106 minor tail protein tail 1 13060 14769
YP_009100131.1 NC_025433_p19 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 19964 21850
YP_009100190.1 NC_025433_p78 hypothetical protein phrog_1311 unknown function unknown function 1 46564 46665
YP_009100170.1 NC_025433_p58 hypothetical protein phrog_3416 unknown function unknown function 1 39117 40025
YP_009100167.1 NC_025433_p55 hypothetical protein phrog_1816 unknown function unknown function 1 37954 38145
YP_009100189.1 NC_025433_p77 hypothetical protein phrog_5921 unknown function unknown function 1 46419 46571
YP_009100220.1 NC_025433_p108 hypothetical protein phrog_1693 unknown function unknown function 1 57248 57460
YP_009100176.1 NC_025433_p64 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 41975 42340
YP_009100179.1 NC_025433_p67 hypothetical protein phrog_2632 unknown function unknown function 1 42722 42964
YP_009100201.1 NC_025433_p89 hypothetical protein phrog_722 unknown function unknown function 1 51224 51349
YP_009100202.1 NC_025433_p90 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 51483 51854
YP_009100169.1 NC_025433_p57 hypothetical protein phrog_1797 unknown function unknown function 1 38366 39082
YP_009100138.1 NC_025433_p26 hypothetical protein phrog_411 unknown function unknown function 1 25626 25910
YP_009100157.1 NC_025433_p45 hypothetical protein phrog_1 integrase integration and excision 1 32606 33709
YP_009100216.1 NC_025433_p104 hypothetical protein phrog_1186 unknown function unknown function 1 54993 55406
YP_009100199.1 NC_025433_p87 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism 1 50441 50950
YP_009100217.1 NC_025433_p105 hypothetical protein phrog_1385 unknown function unknown function 1 55403 55645
YP_009100155.1 NC_025433_p43 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31936 32148
YP_009100203.1 NC_025433_p91 hypothetical protein phrog_7842 unknown function unknown function 1 51841 52014
YP_009100133.1 NC_025433_p21 hypothetical protein phrog_240 head protein head and packaging 1 23031 23372
YP_009100183.1 NC_025433_p71 hypothetical protein phrog_2233 unknown function unknown function 1 44380 45054
YP_009100161.1 NC_025433_p49 hypothetical protein singleton unknown function unknown function 1 35486 35827
YP_009100207.1 NC_025433_p95 hypothetical protein phrog_6540 unknown function unknown function 1 52605 52901
YP_009100181.1 NC_025433_p69 hypothetical protein phrog_17733 unknown function unknown function 1 43839 44024
YP_009100139.1 NC_025433_p27 hypothetical protein phrog_932 unknown function unknown function 1 25917 26063
YP_009100197.1 NC_025433_p85 hypothetical protein phrog_1573 DNA methyltransferase other 1 49957 50334
YP_009100191.1 NC_025433_p79 hypothetical protein phrog_67 DNA methyltransferase other 1 46662 48335
YP_009100158.1 NC_025433_p46 hypothetical protein phrog_1948 unknown function unknown function -1 33771 34220
YP_009100152.1 NC_025433_p40 hypothetical protein phrog_2864 unknown function unknown function -1 31347 31514
YP_009100153.1 NC_025433_p41 hypothetical protein phrog_20138 unknown function unknown function -1 31514 31684
YP_009100121.1 NC_025433_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6781 7110
YP_009100194.1 NC_025433_p82 hypothetical protein phrog_2080 unknown function unknown function 1 49318 49581
YP_009100120.1 NC_025433_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6446 6778
YP_009100141.1 NC_025433_p29 hypothetical protein phrog_747 unknown function unknown function 1 26262 26534