Genomic map of Idiomarinaceae phage 1N2-2 (NC_025439)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025439
Definition
Idiomarinaceae phage 1N2-2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
34773
Host Name
Idiomarinaceae bacterium N2-2
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
51.98
Number of singletons
17
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009100912.1 NC_025439_p5 hypothetical protein phrog_36059 unknown function unknown function 1 2293 2484
YP_009100911.1 NC_025439_p4 hypothetical protein singleton unknown function unknown function 1 2114 2314
YP_009100913.1 NC_025439_p6 portal protein phrog_12 portal protein head and packaging 1 2551 3879
YP_009100937.1 NC_025439_p30 Rz-1-like protein phrog_1275 Rz-like spanin lysis 1 21226 21435
YP_009100909.1 NC_025439_p2 large terminase phrog_38 terminase large subunit head and packaging 1 475 1845
YP_009100955.1 NC_025439_p48 Cas4-domain exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 28304 29263
YP_009100942.1 NC_025439_p35 hypothetical protein phrog_36200 unknown function unknown function -1 22276 22542
YP_009100925.1 NC_025439_p18 tail-head connector protein phrog_176 tail terminator connector 1 10822 11283
YP_009100928.1 NC_025439_p21 tail tape measure protein phrog_9483 tail length tape measure protein tail 1 12273 14213
YP_009100947.1 NC_025439_p40 hypothetical protein phrog_236 nucleotide kinase other -1 23583 23795
YP_009100946.1 NC_025439_p39 hypothetical protein singleton unknown function unknown function -1 23279 23455
YP_009100914.1 NC_025439_p7 hypothetical protein singleton unknown function unknown function 1 3866 4045
YP_009100949.1 NC_025439_p42 DNA methylase phrog_67 DNA methyltransferase other -1 24061 24840
YP_009100941.1 NC_025439_p34 hypothetical protein phrog_33086 unknown function unknown function -1 22103 22288
YP_009100956.1 NC_025439_p49 hypothetical protein phrog_21138 unknown function unknown function -1 29260 29895
YP_009100952.1 NC_025439_p45 VRR-nuclease phrog_824 unknown function unknown function -1 26032 26394
YP_009100957.1 NC_025439_p50 hypothetical protein singleton unknown function unknown function -1 29897 30340
YP_009100921.1 NC_025439_p14 hypothetical protein singleton unknown function unknown function 1 9254 9478
YP_009100951.1 NC_025439_p44 hypothetical protein singleton unknown function unknown function -1 25742 25993
YP_009100918.1 NC_025439_p11 H-N-H endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 7748 8266
YP_009100908.1 NC_025439_p1 small terminase phrog_51 terminase small subunit head and packaging 1 66 500
YP_009100933.1 NC_025439_p26 tail spike protein singleton unknown function unknown function 1 18178 20445
YP_009100917.1 NC_025439_p10 major capsid protein phrog_10 major head protein head and packaging 1 6485 7714
YP_009100945.1 NC_025439_p38 hypothetical protein singleton unknown function unknown function -1 22881 23123
YP_009100915.1 NC_025439_p8 minor capsid morphogenesis protein phrog_15127 head protein head and packaging 1 4038 5774
YP_009100938.1 NC_025439_p31 hypothetical protein singleton unknown function unknown function -1 21489 21764
YP_009100940.1 NC_025439_p33 hypothetical protein phrog_30584 unknown function unknown function -1 22012 22110
YP_009100960.1 NC_025439_p53 ATPase AAA phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31236 31910
YP_009100936.1 NC_025439_p29 hypothetical protein phrog_1026 Rz-like spanin lysis 1 21108 21317
YP_009100926.1 NC_025439_p19 major tail protein phrog_1407 major tail protein tail 1 11295 11705
YP_009100953.1 NC_025439_p46 hypothetical protein phrog_31018 unknown function unknown function -1 26363 26728
YP_009100923.1 NC_025439_p16 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 10053 10394
YP_009100931.1 NC_025439_p24 tail fiber adhesion protein phrog_11439 tail fiber protein tail 1 15527 17824
YP_009100958.1 NC_025439_p51 single stranded DNA annealing protein phrog_2300 unknown function unknown function -1 30387 30848
YP_009100961.1 NC_025439_p54 HTH transcription regulator, XRE family phrog_18104 transcriptional regulator transcription regulation 1 32033 32203
YP_009100943.1 NC_025439_p36 hypothetical protein phrog_35337 unknown function unknown function -1 22539 22688
YP_009100910.1 NC_025439_p3 hypothetical protein singleton unknown function unknown function 1 1911 2117
YP_009100932.1 NC_025439_p25 hypothetical protein singleton unknown function unknown function 1 17860 18165
YP_009100916.1 NC_025439_p9 prohead protease phrog_80 head maturation protease head and packaging 1 5790 6482
YP_009100944.1 NC_025439_p37 hypothetical protein phrog_28141 unknown function unknown function -1 22681 22881
YP_009100959.1 NC_025439_p52 hypothetical protein singleton unknown function unknown function -1 30838 31239
YP_009100930.1 NC_025439_p23 hypothetical protein phrog_11633 unknown function unknown function 1 14392 15537
YP_009100934.1 NC_025439_p27 amidase phrog_822 amidase lysis 1 20496 20921
YP_009100920.1 NC_025439_p13 portal-tail connector protein phrog_442 head-tail adaptor connector 1 8661 9257
YP_009100919.1 NC_025439_p12 hypothetical protein singleton unknown function unknown function 1 8473 8664
YP_009100927.1 NC_025439_p20 hypothetical protein singleton unknown function unknown function 1 11705 12097
YP_009100929.1 NC_025439_p22 hypothetical protein singleton unknown function unknown function 1 14215 14388
YP_009100935.1 NC_025439_p28 holin protein phrog_34682 holin lysis 1 20918 21115
YP_009100939.1 NC_025439_p32 hypothetical protein phrog_35567 unknown function unknown function -1 21761 22015
YP_009100922.1 NC_025439_p15 hypothetical protein singleton unknown function unknown function 1 9475 10056
YP_009100963.1 NC_025439_p56 NTP-PPase transcriptional repressor phrog_715 MazG-like pyrophosphatase other 1 34468 34773
YP_009100954.1 NC_025439_p47 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 26712 28307
YP_009100962.1 NC_025439_p55 primase-helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 32196 34202
YP_009100950.1 NC_025439_p43 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 24837 25745
YP_009100948.1 NC_025439_p41 hypothetical protein singleton unknown function unknown function -1 23792 24064
YP_009100924.1 NC_025439_p17 tail assembly protein phrog_5 tail completion or Neck1 protein connector 1 10391 10825