Genomic map of Listeria phage WIL-1 (NC_025440)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025440
Definition
Listeria phage WIL-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Jasinkavirinae; Pecentumvirus; Listeria virus WIL1.
DB of origin
REFSEQ
Length
134369
Host Name
Listeria monocytogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
38
%GC
35.98
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009100975.1 NC_025440_p12 metallophosphoesterase phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 54893 56059
YP_009100996.1 NC_025440_p33 capsid protein precursor phrog_752 major head protein head and packaging -1 119660 121063
YP_009100983.1 NC_025440_p20 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 81550 82611
YP_009100966.1 NC_025440_p3 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 6838 8358
YP_009100977.1 NC_025440_p14 recA-like recombinase phrog_97 UvsX-like recombinase other -1 59868 61112
YP_009100980.1 NC_025440_p17 PcfJ domain-containing protein phrog_9253 unknown function unknown function -1 67607 70075
YP_009101000.1 NC_025440_p37 hypothetical protein phrog_1063 terminase small subunit head and packaging -1 131749 132165
YP_009100998.1 NC_025440_p35 N-acetylmuramoyl-L-alanine amidase phrog_5182 endolysin lysis -1 126368 127393
YP_009100993.1 NC_025440_p30 tail lysin phrog_1015 tail protein with lysin activity tail -1 106057 108444
YP_009100973.1 NC_025440_p10 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 48686 49702
YP_009100969.1 NC_025440_p6 hypothetical protein phrog_9011 unknown function unknown function -1 41959 42435
YP_009100974.1 NC_025440_p11 hypothetical protein phrog_1113 unknown function unknown function -1 51490 52374
YP_009100999.1 NC_025440_p36 terminase large subunit phrog_675 terminase large subunit head and packaging -1 129565 131118
YP_009100989.1 NC_025440_p26 tail protein phrog_877 unknown function unknown function -1 93386 96724
YP_009100976.1 NC_025440_p13 hypothetical protein phrog_1850 exopolyphosphatase other -1 56223 57152
YP_009100992.1 NC_025440_p29 glycerophosphoryl diester phosphodiesterase phrog_7994 glycerophosphoryl diester phosphodiesterase other -1 104507 106039
YP_009100978.1 NC_025440_p15 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 63055 65223
YP_009100972.1 NC_025440_p9 hypothetical protein phrog_7005 unknown function unknown function -1 47854 48699
YP_009100994.1 NC_025440_p31 tail lysin phrog_1047 tail associated lysin tail -1 108490 112125
YP_009100997.1 NC_025440_p34 portal protein phrog_12 portal protein head and packaging -1 123033 124550
YP_009100981.1 NC_025440_p18 nicotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 70162 71946
YP_009100995.1 NC_025440_p32 tail sheath protein phrog_279 tail sheath tail -1 114008 115696
YP_009100968.1 NC_025440_p5 hypothetical protein phrog_11450 unknown function unknown function -1 26096 27259
YP_009100991.1 NC_025440_p28 structural protein phrog_6 baseplate wedge subunit tail -1 101461 102456
YP_009100982.1 NC_025440_p19 ribonucleotide reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 76901 79180
YP_009100965.1 NC_025440_p2 hypothetical protein phrog_9386 unknown function unknown function 1 4434 4841
YP_009100970.1 NC_025440_p7 hypothetical protein phrog_9186 unknown function unknown function -1 43112 44221
YP_009100964.1 NC_025440_p1 hypothetical protein phrog_9075 unknown function unknown function 1 1234 1665
YP_009100979.1 NC_025440_p16 hypothetical protein phrog_1054 unknown function unknown function -1 66725 67513
YP_009100971.1 NC_025440_p8 hypothetical protein phrog_1104 virion structural protein head and packaging -1 44336 44803
YP_009100967.1 NC_025440_p4 hypothetical protein phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 9645 10898
YP_009100990.1 NC_025440_p27 portal protein phrog_2386 virion structural protein head and packaging -1 97496 101017
YP_009100984.1 NC_025440_p21 repair exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 83221 85104
YP_009100985.1 NC_025440_p22 exonuclease phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 85199 86152
YP_009101001.1 NC_025440_p38 hypothetical protein phrog_3395 membrane protein moron, auxiliary metabolic gene and host takeover -1 132427 132834
YP_009100987.1 NC_025440_p24 winged helix-turn-helix phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 87747 89387
YP_009100988.1 NC_025440_p25 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 89402 91147
YP_009100986.1 NC_025440_p23 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 86266 87222