Genomic map of Salmonella phage 9NA (NC_025443)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025443
Definition
Salmonella phage 9NA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonanavirus.
DB of origin
REFSEQ
Length
52869
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
42.9
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009101220.1 NC_025443_p50 tail tape measure protein phrog_1107 tail length tape measure protein tail 1 25260 28175
YP_009101223.1 NC_025443_p53 hypothetical protein phrog_329 minor tail protein tail 1 29181 29540
YP_009101183.1 NC_025443_p13 hypothetical protein phrog_8329 unknown function unknown function 1 6174 6524
YP_009101177.1 NC_025443_p7 hypothetical protein phrog_8294 unknown function unknown function -1 2291 2464
YP_009101228.1 NC_025443_p58 hypothetical protein phrog_1322 membrane protein moron, auxiliary metabolic gene and host takeover 1 34920 35150
YP_009101250.1 NC_025443_p80 hypothetical protein singleton unknown function unknown function 1 50290 50421
YP_009101175.1 NC_025443_p5 hypothetical protein phrog_25300 unknown function unknown function -1 1706 2008
YP_009101210.1 NC_025443_p40 major capsid protein phrog_1005 major head protein head and packaging 1 18282 19301
YP_009101252.1 NC_025443_p82 hypothetical protein singleton unknown function unknown function 1 51410 51571
YP_009101196.1 NC_025443_p26 hypothetical protein phrog_25244 unknown function unknown function -1 11186 11440
YP_009101224.1 NC_025443_p54 tail tip protein phrog_469 tail protein tail 1 29533 32055
YP_009101213.1 NC_025443_p43 hypothetical protein phrog_161 head closure Hc1 connector 1 20498 20872
YP_009101247.1 NC_025443_p77 hypothetical protein phrog_26050 unknown function unknown function 1 49218 49430
YP_009101237.1 NC_025443_p67 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41181 42326
YP_009101181.1 NC_025443_p11 large terminase subunit phrog_2 terminase large subunit head and packaging 1 4070 5833
YP_009101230.1 NC_025443_p60 hypothetical protein phrog_25980 unknown function unknown function -1 35600 35833
YP_009101211.1 NC_025443_p41 hypothetical protein phrog_19242 unknown function unknown function 1 19365 19748
YP_009101214.1 NC_025443_p44 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 20872 21300
YP_009101219.1 NC_025443_p49 tail assembly chaperone phrog_313 Tail assembly chaperone tail 1 24508 24933
YP_009101203.1 NC_025443_p33 prohead assembly protein phrog_2468 head morphogenesis head and packaging 1 13743 14702
YP_009101242.1 NC_025443_p72 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 45585 46076
YP_009101200.1 NC_025443_p30 hypothetical protein phrog_26866 unknown function unknown function 1 13177 13368
YP_009101229.1 NC_025443_p59 hypothetical protein phrog_1152 Rz-like spanin lysis 1 35137 35535
YP_009101190.1 NC_025443_p20 hypothetical protein phrog_36680 unknown function unknown function -1 7960 8271
YP_009101192.1 NC_025443_p22 portal protein phrog_113 portal protein head and packaging 1 8779 10134
YP_009101249.1 NC_025443_p79 hypothetical protein singleton unknown function unknown function 1 50100 50297
YP_009101225.1 NC_025443_p55 tailspike protein phrog_1819 tail spike protein tail -1 32147 34168
YP_009101184.1 NC_025443_p14 hypothetical protein phrog_7239 unknown function unknown function 1 6511 6765
YP_009101251.1 NC_025443_p81 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 50488 51252
YP_009101245.1 NC_025443_p75 hypothetical protein phrog_9291 unknown function unknown function 1 48695 48907
YP_009101185.1 NC_025443_p15 hypothetical protein singleton unknown function unknown function 1 6776 6940
YP_009101227.1 NC_025443_p57 endolysin phrog_465 endolysin lysis 1 34520 34909
YP_009101207.1 NC_025443_p37 hypothetical protein phrog_1530 DNA methyltransferase other 1 16199 16609
YP_009101187.1 NC_025443_p17 hypothetical protein phrog_16556 unknown function unknown function -1 7251 7412
YP_009101206.1 NC_025443_p36 hypothetical protein singleton unknown function unknown function -1 15672 15794
YP_009101236.1 NC_025443_p66 hypothetical protein phrog_7011 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 40218 41168
YP_009101226.1 NC_025443_p56 hypothetical protein phrog_24402 holin lysis 1 34197 34523
YP_009101189.1 NC_025443_p19 hypothetical protein singleton unknown function unknown function -1 7736 7963
YP_009101174.1 NC_025443_p4 hypothetical protein phrog_38795 unknown function unknown function -1 1425 1634
YP_009101222.1 NC_025443_p52 hypothetical protein phrog_396 minor tail protein tail 1 28678 29184
YP_009101186.1 NC_025443_p16 hypothetical protein phrog_15669 unknown function unknown function -1 6973 7248
YP_009101215.1 NC_025443_p45 hypothetical protein phrog_179 tail terminator connector 1 21297 21719
YP_009101235.1 NC_025443_p65 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 38237 40138
YP_009101182.1 NC_025443_p12 hypothetical protein singleton unknown function unknown function 1 5959 6147
YP_009101198.1 NC_025443_p28 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 11763 12266
YP_009101204.1 NC_025443_p34 hypothetical protein phrog_13999 unknown function unknown function -1 14932 15144
YP_009101218.1 NC_025443_p48 tail assembly chaperone phrog_8233 tail assembly chaperone tail 1 24508 25202
YP_009101244.1 NC_025443_p74 P4 family primase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 46250 48604
YP_009101212.1 NC_025443_p42 hypothetical protein phrog_21889 unknown function unknown function 1 19953 20498
YP_009101208.1 NC_025443_p38 hypothetical protein phrog_19463 unknown function unknown function 1 16609 17868
YP_009101199.1 NC_025443_p29 hypothetical protein singleton unknown function unknown function 1 12381 13187
YP_009101238.1 NC_025443_p68 hypothetical protein phrog_27827 unknown function unknown function -1 42326 43120
YP_009101254.1 NC_025443_p84 hypothetical protein phrog_25538 unknown function unknown function -1 51922 52620
YP_009101194.1 NC_025443_p24 hypothetical protein phrog_571 unknown function unknown function -1 10480 10824
YP_009101232.1 NC_025443_p62 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 36988 37338
YP_009101205.1 NC_025443_p35 hypothetical protein phrog_7033 unknown function unknown function -1 15141 15407
YP_009101240.1 NC_025443_p70 helicase DEXDc superfamily protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 43375 45039
YP_009101221.1 NC_025443_p51 hypothetical protein phrog_384 virion structural protein head and packaging 1 28178 28681
YP_009101239.1 NC_025443_p69 hypothetical protein singleton unknown function unknown function 1 43133 43378
YP_009101195.1 NC_025443_p25 hypothetical protein phrog_27401 unknown function unknown function -1 10840 11184
YP_009101171.1 NC_025443_p1 hypothetical protein phrog_51 terminase small subunit head and packaging 1 296 931
YP_009101178.1 NC_025443_p8 hypothetical protein phrog_31372 unknown function unknown function -1 2468 2662
YP_009101253.1 NC_025443_p83 hypothetical protein singleton unknown function unknown function -1 51671 51925
YP_009101179.1 NC_025443_p9 hypothetical protein phrog_33811 unknown function unknown function -1 2655 2987
YP_009101191.1 NC_025443_p21 hypothetical protein singleton unknown function unknown function -1 8281 8637
YP_009101197.1 NC_025443_p27 hypothetical protein phrog_5086 unknown function unknown function -1 11437 11763
YP_009101176.1 NC_025443_p6 hypothetical protein phrog_30984 unknown function unknown function -1 2001 2288
YP_009101209.1 NC_025443_p39 major virion structural protein phrog_673 head scaffolding protein head and packaging 1 17868 18278
YP_009101173.1 NC_025443_p3 hypothetical protein phrog_10996 unknown function unknown function -1 1176 1388
YP_009101234.1 NC_025443_p64 hypothetical protein phrog_19205 unknown function unknown function -1 37660 38196
YP_009101231.1 NC_025443_p61 DNA methylase phrog_67 DNA methyltransferase other -1 35817 36998
YP_009101243.1 NC_025443_p73 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 46073 46246
YP_009101202.1 NC_025443_p32 hypothetical protein phrog_13897 unknown function unknown function 1 13555 13698
YP_009101188.1 NC_025443_p18 hypothetical protein singleton unknown function unknown function -1 7563 7739
YP_009101233.1 NC_025443_p63 NinX phrog_444 unknown function unknown function -1 37335 37667
YP_009101172.1 NC_025443_p2 hypothetical protein singleton unknown function unknown function -1 1006 1206
YP_009101241.1 NC_025443_p71 exonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 45082 45588
YP_009101193.1 NC_025443_p23 hypothetical protein phrog_3362 unknown function unknown function 1 10137 10448
YP_009101216.1 NC_025443_p46 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 21691 22587
YP_009101248.1 NC_025443_p78 C-5 cytosine DNA methylase phrog_757 DNA methyltransferase other 1 49427 50113
YP_009101201.1 NC_025443_p31 NinH phrog_268 unknown function unknown function 1 13365 13568
YP_009101246.1 NC_025443_p76 hypothetical protein phrog_22517 lipoprotein other 1 49028 49225
YP_009101180.1 NC_025443_p10 hypothetical protein phrog_21347 unknown function unknown function -1 3128 3736
YP_009101217.1 NC_025443_p47 major tail protein phrog_290 minor tail protein tail 1 22692 24149