Genomic map of Enterobacteria phage J8-65 (NC_025445)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025445
Definition
Enterobacteria phage J8-65, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Bonnellvirus; Escherichia virus J8-65.
DB of origin
REFSEQ
Length
40981
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
47
%GC
55.68
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009101368.1 NC_025445_p19 hypothetical protein phrog_862 unknown function unknown function 1 12133 13038
YP_009101360.1 NC_025445_p11 hypothetical protein singleton unknown function unknown function 1 5664 5903
YP_009101361.1 NC_025445_p12 hypothetical protein phrog_28324 unknown function unknown function 1 5897 6337
YP_009101376.1 NC_025445_p27 hypothetical protein phrog_6060 anti-termination protein Q-like transcription regulation 1 16899 17165
YP_009101391.1 NC_025445_p42 TerL phrog_38 terminase large subunit head and packaging 1 36656 38392
YP_009101387.1 NC_025445_p38 internal head protein phrog_2083 internal virion lysozyme motif head and packaging 1 28154 30850
YP_009101369.1 NC_025445_p20 hypothetical protein singleton unknown function unknown function 1 13074 13271
YP_009101389.1 NC_025445_p40 tailspike colanidase phrog_6117 colanic acid degradation moron, auxiliary metabolic gene and host takeover 1 33948 36332
YP_009101366.1 NC_025445_p17 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 8977 9660
YP_009101390.1 NC_025445_p41 TerS phrog_891 terminase small subunit head and packaging 1 36342 36632
YP_009101353.1 NC_025445_p4 hypothetical protein singleton unknown function unknown function 1 2989 3258
YP_009101388.1 NC_025445_p39 internal head protein phrog_342 internal virion protein with endolysin domain head and packaging 1 30847 33948
YP_009101374.1 NC_025445_p25 kinase-phosphatase phrog_415 polynucleotide kinase other 1 15808 16335
YP_009101362.1 NC_025445_p13 DNA primase phrog_8634 DNA primase DNA, RNA and nucleotide metabolism 1 6334 7047
YP_009101371.1 NC_025445_p22 endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 14132 14512
YP_009101357.1 NC_025445_p8 hypothetical protein phrog_34944 unknown function unknown function 1 4420 4716
YP_009101373.1 NC_025445_p24 hypothetical protein singleton unknown function unknown function 1 15630 15857
YP_009101365.1 NC_025445_p16 hypothetical protein phrog_31596 unknown function unknown function 1 8796 8987
YP_009101355.1 NC_025445_p6 hypothetical protein singleton unknown function unknown function 1 3681 3932
YP_009101358.1 NC_025445_p9 hypothetical protein singleton unknown function unknown function 1 4720 5235
YP_009101381.1 NC_025445_p32 portal protein phrog_449 head-tail adaptor connector 1 20553 22115
YP_009101384.1 NC_025445_p35 tail protein A phrog_446 tail protein tail 1 24423 24971
YP_009101378.1 NC_025445_p29 hypothetical protein singleton unknown function unknown function 1 19688 19870
YP_009101380.1 NC_025445_p31 structural protein phrog_35536 virion structural protein head and packaging 1 20289 20549
YP_009101377.1 NC_025445_p28 rNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 17175 19604
YP_009101364.1 NC_025445_p15 hypothetical protein singleton unknown function unknown function 1 8322 8675
YP_009101395.1 NC_025445_p46 hypothetical protein phrog_35530 unknown function unknown function 1 39797 40114
YP_009101393.1 NC_025445_p44 hypothetical protein singleton unknown function unknown function 1 39075 39260
YP_009101372.1 NC_025445_p23 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 14512 15633
YP_009101383.1 NC_025445_p34 major capsid protein phrog_267 major head protein head and packaging 1 23370 24362
YP_009101392.1 NC_025445_p43 hypothetical protein phrog_9732 unknown function unknown function 1 38392 39063
YP_009101379.1 NC_025445_p30 hypothetical protein phrog_3986 unknown function unknown function 1 19870 20289
YP_009101367.1 NC_025445_p18 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 9671 12136
YP_009101375.1 NC_025445_p26 hypothetical protein phrog_19680 unknown function unknown function 1 16268 16924
YP_009101356.1 NC_025445_p7 hypothetical protein singleton unknown function unknown function 1 4005 4418
YP_009101385.1 NC_025445_p36 tail protein B phrog_457 tail protein tail 1 24971 27415
YP_009101396.1 NC_025445_p47 endolysin phrog_315 endolysin lysis 1 40114 40650
YP_009101394.1 NC_025445_p45 hypothetical protein phrog_1804 Rz-like spanin lysis 1 39271 39762
YP_009101386.1 NC_025445_p37 internal head protein phrog_4295 internal virion protein head and packaging 1 27417 28151
YP_009101352.1 NC_025445_p3 hypothetical protein singleton unknown function unknown function 1 2611 2922
YP_009101363.1 NC_025445_p14 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7057 8322
YP_009101359.1 NC_025445_p10 hypothetical protein singleton unknown function unknown function 1 5389 5631
YP_009101370.1 NC_025445_p21 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 13228 14205
YP_009101351.1 NC_025445_p2 hypothetical protein phrog_1448 unknown function unknown function 1 2005 2532
YP_009101350.1 NC_025445_p1 anti-restriction SAMase phrog_2226 SAM-dependent methyltransferase other 1 1468 1857
YP_009101382.1 NC_025445_p33 scaffolding protein phrog_36307 head scaffolding protein head and packaging 1 22126 23346
YP_009101354.1 NC_025445_p5 hypothetical protein singleton unknown function unknown function 1 3329 3604