Genomic map of Yersinia phage vB_YenP_AP5 (NC_025451)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025451
Definition
Yersinia phage vB_YenP_AP5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; Yersinia virus AP5.
DB of origin
REFSEQ
Length
38646
Host Name
Yersinia enterocolitica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
50.69
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009102809.1 NC_025451_p14 ssDNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9281 9979
YP_009102828.1 NC_025451_p33 tail tubular protein A phrog_446 tail protein tail 1 22270 22860
YP_009102838.1 NC_025451_p43 phage lambda Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 35570 36022
YP_009102834.1 NC_025451_p39 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29016 32978
YP_009102796.1 NC_025451_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 1017 1475
YP_009102823.1 NC_025451_p28 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17879 18199
YP_009102833.1 NC_025451_p38 internal virion protein C phrog_1339 internal virion protein head and packaging 1 26754 28997
YP_009102829.1 NC_025451_p34 tail tubular protein B phrog_457 tail protein tail 1 22876 25281
YP_009102830.1 NC_025451_p35 internal virion protein A phrog_308 internal virion protein head and packaging 1 25354 25779
YP_009102815.1 NC_025451_p20 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13442 15556
YP_009102825.1 NC_025451_p30 capsid assembly protein phrog_1052 head assembly head and packaging 1 19919 20851
YP_009102820.1 NC_025451_p25 hypothetical protein phrog_5008 unknown function unknown function 1 17144 17257
YP_009102804.1 NC_025451_p9 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6919 7965
YP_009102803.1 NC_025451_p8 deoxyguanosine triphospho-hydrolase inhibitor phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6549 6824
YP_009102826.1 NC_025451_p31 major capsid protein phrog_267 major head protein head and packaging 1 21008 22054
YP_009102821.1 NC_025451_p26 hypothetical protein phrog_1447 unknown function unknown function 1 17401 17595
YP_009102839.1 NC_025451_p44 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 35997 37760
YP_009102805.1 NC_025451_p10 hypothetical protein phrog_1777 unknown function unknown function 1 8135 8392
YP_009102798.1 NC_025451_p3 hypothetical protein phrog_10380 unknown function unknown function 1 1938 2108
YP_009102816.1 NC_025451_p21 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 15573 15869
YP_009102807.1 NC_025451_p12 hypothetical protein phrog_1312 unknown function unknown function 1 8858 8995
YP_009102806.1 NC_025451_p11 hypothetical protein phrog_4943 unknown function unknown function 1 8392 8871
YP_009102840.1 NC_025451_p45 hypothetical protein phrog_2193 unknown function unknown function 1 38005 38154
YP_009102824.1 NC_025451_p29 head to tail joining protein phrog_449 head-tail adaptor connector 1 18210 19817
YP_009102812.1 NC_025451_p17 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11255 12769
YP_009102810.1 NC_025451_p15 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9979 10440
YP_009102837.1 NC_025451_p42 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 35215 35481
YP_009102811.1 NC_025451_p16 lysin phrog_822 amidase lysis 1 10433 10888
YP_009102836.1 NC_025451_p41 holin phrog_920 holin lysis 1 35008 35211
YP_009102817.1 NC_025451_p22 hypothetical protein phrog_1334 unknown function unknown function 1 15866 16075
YP_009102801.1 NC_025451_p6 hypothetical protein phrog_6379 unknown function unknown function 1 6044 6316
YP_009102814.1 NC_025451_p19 hypothetical protein phrog_2254 unknown function unknown function 1 13090 13374
YP_009102797.1 NC_025451_p2 hypothetical protein phrog_2385 unknown function unknown function 1 1748 1951
YP_009102835.1 NC_025451_p40 tail fiber protein phrog_9502 tail fiber protein tail 1 33050 34996
YP_009102799.1 NC_025451_p4 protein kinase phrog_2828 serine-threonine kinase other 1 2123 3232
YP_009102802.1 NC_025451_p7 hypothetical protein phrog_2490 unknown function unknown function 1 6409 6549
YP_009102822.1 NC_025451_p27 hypothetical protein phrog_1391 unknown function unknown function 1 17600 17851
YP_009102831.1 NC_025451_p36 hypothetical protein phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 25766 26155
YP_009102808.1 NC_025451_p13 host RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8992 9228
YP_009102832.1 NC_025451_p37 internal virion protein B phrog_805 internal virion protein head and packaging 1 26158 26751
YP_009102827.1 NC_025451_p32 minor capsid protein phrog_20538 head protein head and packaging 1 22066 22188
YP_009102800.1 NC_025451_p5 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 3303 5957
YP_009102818.1 NC_025451_p23 host recBCD nuclease inhibitor phrog_4790 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 16072 16254
YP_009102819.1 NC_025451_p24 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16251 17162
YP_009102813.1 NC_025451_p18 hypothetical protein phrog_1950 unknown function unknown function 1 12865 13077