Genomic map of Enterococcus phage EFC-1 (NC_025453)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025453
Definition
Enterococcus phage EFC-1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
40286
Host Name
Enterococcus faecalis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
35.04
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009103050.1 NC_025453_p14 hypothetical protein phrog_2698 unknown function unknown function 1 6655 7242
YP_009103055.1 NC_025453_p19 methyltransferase phrog_954 DNA methyltransferase other 1 10463 10909
YP_009103038.1 NC_025453_p2 lipoprotein phrog_13294 lipoprotein other -1 300 1184
YP_009103047.1 NC_025453_p11 hypothetical protein phrog_121 unknown function unknown function 1 3726 4304
YP_009103095.1 NC_025453_p59 site-specific integrase phrog_95 integrase integration and excision -1 38709 40103
YP_009103058.1 NC_025453_p22 6-phosphofructokinase phrog_1773 6-phosphofructokinase other 1 11766 11933
YP_009103043.1 NC_025453_p7 hypothetical protein phrog_1655 unknown function unknown function 1 2909 3097
YP_009103063.1 NC_025453_p27 hypothetical protein phrog_6996 unknown function unknown function -1 15768 16037
YP_009103078.1 NC_025453_p42 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 24708 25088
YP_009103041.1 NC_025453_p5 transcription repressor phrog_3 transcriptional repressor transcription regulation 1 2427 2690
YP_009103083.1 NC_025453_p47 hypothetical protein phrog_441 tail assembly chaperone tail 1 27055 27312
YP_009103069.1 NC_025453_p33 portal protein phrog_64 portal protein head and packaging 1 19287 20825
YP_009103073.1 NC_025453_p37 hypothetical protein singleton unknown function unknown function 1 22261 22338
YP_009103037.1 NC_025453_p1 hypothetical protein phrog_3374 unknown function unknown function -1 84 284
YP_009103092.1 NC_025453_p56 L-alanyl-D-glutamate peptidase phrog_36840 unknown function unknown function 1 37176 37412
YP_009103072.1 NC_025453_p36 hypothetical protein phrog_9991 unknown function unknown function 1 22035 22256
YP_009103059.1 NC_025453_p23 PF07852 family protein phrog_121 unknown function unknown function 1 11926 12663
YP_009103052.1 NC_025453_p16 hypothetical protein phrog_1029 unknown function unknown function 1 7688 8437
YP_009103079.1 NC_025453_p43 phage capsid and scaffold phrog_176 tail terminator connector 1 25085 25474
YP_009103070.1 NC_025453_p34 head morphogenesis protein phrog_115 minor head protein head and packaging 1 20830 21768
YP_009103075.1 NC_025453_p39 HK97 family phage major capsid protein phrog_10 major head protein head and packaging 1 23063 23995
YP_009103068.1 NC_025453_p32 terminase large subunit phrog_2 terminase large subunit head and packaging 1 17885 19273
YP_009103045.1 NC_025453_p9 hypothetical protein phrog_1270 unknown function unknown function 1 3234 3437
YP_009103087.1 NC_025453_p51 hypothetical protein phrog_5381 unknown function unknown function 1 33701 33874
YP_009103065.1 NC_025453_p29 hypothetical protein phrog_3745 unknown function unknown function 1 16484 16717
YP_009103071.1 NC_025453_p35 hypothetical protein phrog_1315 unknown function unknown function 1 21769 22038
YP_009103093.1 NC_025453_p57 TIR protein phrog_15646 unknown function unknown function -1 37404 38246
YP_009103062.1 NC_025453_p26 hypothetical protein phrog_33704 unknown function unknown function 1 15521 15748
YP_009103067.1 NC_025453_p31 terminase small subunit phrog_51 terminase small subunit head and packaging 1 17347 17892
YP_009103090.1 NC_025453_p54 holin phrog_199 holin lysis 1 35699 36103
YP_009103048.1 NC_025453_p12 chromosome segregation protein phrog_1499 unknown function unknown function 1 4288 5595
YP_009103046.1 NC_025453_p10 hypothetical protein phrog_1463 unknown function unknown function 1 3427 3621
YP_009103094.1 NC_025453_p58 hypothetical protein phrog_15227 unknown function unknown function -1 38340 38588
YP_009103039.1 NC_025453_p3 toxin phrog_87 metallo-protease other -1 1274 1747
YP_009103074.1 NC_025453_p38 scaffold protein phrog_172 head scaffolding protein head and packaging 1 22451 23050
YP_009103076.1 NC_025453_p40 head-tail connector domain protein phrog_132 head-tail adaptor connector 1 24069 24401
YP_009103060.1 NC_025453_p24 hypothetical protein phrog_1335 unknown function unknown function 1 12846 13049
YP_009103051.1 NC_025453_p15 replication terminator protein phrog_997 replication terminator DNA, RNA and nucleotide metabolism 1 7255 7683
YP_009103056.1 NC_025453_p20 YopX phrog_98 unknown function unknown function 1 10935 11375
YP_009103066.1 NC_025453_p30 hypothetical protein phrog_1558 unknown function unknown function 1 16710 17243
YP_009103061.1 NC_025453_p25 primase2 phrog_2597 DNA primase DNA, RNA and nucleotide metabolism 1 13058 15277
YP_009103042.1 NC_025453_p6 hypothetical protein phrog_12482 unknown function unknown function 1 2721 2906
YP_009103044.1 NC_025453_p8 hypothetical protein phrog_31783 unknown function unknown function 1 3094 3234
YP_009103049.1 NC_025453_p13 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 5599 6645
YP_009103054.1 NC_025453_p18 hypothetical protein phrog_12808 unknown function unknown function 1 10044 10370
YP_009103057.1 NC_025453_p21 YopX domain protein phrog_98 unknown function unknown function 1 11350 11769
YP_009103085.1 NC_025453_p49 tail protein phrog_5163 minor tail protein tail 1 30736 31665
YP_009103077.1 NC_025453_p41 hypothetical protein phrog_348 minor head protein head and packaging 1 24398 24733
YP_009103081.1 NC_025453_p45 tail protein phrog_341 major tail protein tail 1 26098 26556
YP_009103091.1 NC_025453_p55 lysin phrog_670 endolysin lysis 1 36087 36920
YP_009103040.1 NC_025453_p4 XRE family transcriptional regulator phrog_2967 transcriptional regulator transcription regulation -1 1764 2288
YP_009103080.1 NC_025453_p44 tail protein phrog_238 major tail protein tail 1 25490 26020
YP_009103088.1 NC_025453_p52 glycerophosphodiester phosphodiesterase phrog_5793 unknown function unknown function 1 33886 35604
YP_009103084.1 NC_025453_p48 tapemeasure domain-containing protein phrog_1686 tail length tape measure protein tail 1 27328 30735
YP_009103082.1 NC_025453_p46 hypothetical protein phrog_183 tail chaperone protein tail 1 26612 26962
YP_009103064.1 NC_025453_p28 endodeoxyribonuclease RusA phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 16092 16487
YP_009103089.1 NC_025453_p53 hypothetical protein singleton unknown function unknown function 1 35617 35712
YP_009103053.1 NC_025453_p17 DEAD/DEAH box helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 8450 10054
YP_009103086.1 NC_025453_p50 minor structural protein phrog_4311 minor head protein head and packaging 1 31682 33700