Genomic map of Idiomarinaceae phage Phi1M2-2 (NC_025471)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025471
Definition
Idiomarinaceae phage Phi1M2-2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
36844
Host Name
Idiomarinaceae bacterium M2-2
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
51.3
Number of singletons
25
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009104252.1 NC_025471_p15 tail protein phrog_169 tail completion or Neck1 protein connector 1 9665 10021
YP_009104280.1 NC_025471_p43 hypothetical protein phrog_33086 unknown function unknown function -1 24998 25183
YP_009104291.1 NC_025471_p54 hypothetical protein singleton unknown function unknown function -1 27437 28132
YP_009104275.1 NC_025471_p38 hypothetical protein singleton unknown function unknown function -1 24014 24187
YP_009104292.1 NC_025471_p55 hypothetical protein singleton unknown function unknown function -1 28143 28298
YP_009104268.1 NC_025471_p31 tail fiber protein phrog_469 tail protein tail 1 17595 19973
YP_009104294.1 NC_025471_p57 VRR-DNA nuclease phrog_824 unknown function unknown function -1 28749 29159
YP_009104278.1 NC_025471_p41 hypothetical protein phrog_35567 unknown function unknown function -1 24656 24910
YP_009104272.1 NC_025471_p35 holin protein phrog_34682 holin lysis 1 23446 23643
YP_009104287.1 NC_025471_p50 hypothetical protein singleton unknown function unknown function -1 26469 26714
YP_009104300.1 NC_025471_p63 HTH-XRE transcriptional regulator phrog_18104 transcriptional regulator transcription regulation 1 33571 33741
YP_009104258.1 NC_025471_p21 hypothetical protein singleton unknown function unknown function 1 12186 12653
YP_009104248.1 NC_025471_p11 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7838 8218
YP_009104293.1 NC_025471_p56 hypothetical protein singleton unknown function unknown function -1 28525 28773
YP_009104260.1 NC_025471_p23 hypothetical protein singleton unknown function unknown function 1 12938 13057
YP_009104284.1 NC_025471_p47 hypothetical protein phrog_1273 unknown function unknown function -1 25773 26108
YP_009104249.1 NC_025471_p12 hypothetical protein singleton unknown function unknown function 1 8367 8924
YP_009104273.1 NC_025471_p36 hypothetical protein phrog_1026 Rz-like spanin lysis 1 23636 23845
YP_009104290.1 NC_025471_p53 hypothetical protein singleton unknown function unknown function -1 27198 27440
YP_009104238.1 NC_025471_p1 small terminase phrog_51 terminase small subunit head and packaging 1 54 518
YP_009104288.1 NC_025471_p51 hypothetical protein singleton unknown function unknown function -1 26748 26990
YP_009104264.1 NC_025471_p27 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 14011 16206
YP_009104274.1 NC_025471_p37 Rz-1-like protein phrog_1275 Rz-like spanin lysis 1 23754 23963
YP_009104277.1 NC_025471_p40 hypothetical protein singleton unknown function unknown function -1 24450 24659
YP_009104276.1 NC_025471_p39 hypothetical protein singleton unknown function unknown function -1 24184 24453
YP_009104241.1 NC_025471_p4 capsid morphogenesis protein phrog_241 head morphogenesis head and packaging 1 2131 3180
YP_009104251.1 NC_025471_p14 structural protein phrog_161 head closure Hc1 connector 1 9300 9668
YP_009104242.1 NC_025471_p5 structural protein phrog_145 portal protein head and packaging 1 3234 4739
YP_009104240.1 NC_025471_p3 hypothetical protein phrog_6519 unknown function unknown function 1 1896 2138
YP_009104243.1 NC_025471_p6 capsid scaffold protein phrog_206 head scaffolding protein head and packaging 1 4792 5532
YP_009104297.1 NC_025471_p60 hypothetical protein singleton unknown function unknown function -1 31888 32070
YP_009104266.1 NC_025471_p29 hypothetical protein phrog_396 minor tail protein tail 1 16694 17185
YP_009104286.1 NC_025471_p49 hypothetical protein singleton unknown function unknown function -1 26308 26472
YP_009104283.1 NC_025471_p46 hypothetical protein phrog_35337 unknown function unknown function -1 25637 25780
YP_009104254.1 NC_025471_p17 tail protein phrog_290 minor tail protein tail 1 10480 11391
YP_009104261.1 NC_025471_p24 hypothetical protein singleton unknown function unknown function 1 13059 13268
YP_009104285.1 NC_025471_p48 hypothetical protein phrog_28141 unknown function unknown function -1 26105 26302
YP_009104296.1 NC_025471_p59 Yqaj-like alkaline DNA exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism -1 31029 31886
YP_009104282.1 NC_025471_p45 hypothetical protein singleton unknown function unknown function -1 25437 25640
YP_009104289.1 NC_025471_p52 hypothetical protein phrog_474 phosphofructokinase other -1 26839 27201
YP_009104259.1 NC_025471_p22 hypothetical protein singleton unknown function unknown function 1 12634 12948
YP_009104253.1 NC_025471_p16 tail minor protein phrog_179 tail terminator connector 1 10018 10452
YP_009104262.1 NC_025471_p25 DUF1789 domain protein phrog_313 Tail assembly chaperone tail 1 13300 13695
YP_009104279.1 NC_025471_p42 hypothetical protein phrog_30584 unknown function unknown function -1 24907 25005
YP_009104267.1 NC_025471_p30 NlpC/P60 hydrolase family protein phrog_329 minor tail protein tail 1 17182 17574
YP_009104257.1 NC_025471_p20 hypothetical protein phrog_409 transcriptional regulator transcription regulation 1 12022 12189
YP_009104302.1 NC_025471_p65 hypothetical protein singleton unknown function unknown function 1 36538 36711
YP_009104246.1 NC_025471_p9 hypothetical protein phrog_13935 unknown function unknown function 1 6892 7431
YP_009104301.1 NC_025471_p64 bifunctional DNA primase/polymerase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 33741 36005
YP_009104255.1 NC_025471_p18 hypothetical protein singleton unknown function unknown function 1 11550 11783
YP_009104270.1 NC_025471_p33 phosphodiesterase/alkaline phosphatase singleton unknown function unknown function 1 21818 23044
YP_009104256.1 NC_025471_p19 hypothetical protein singleton unknown function unknown function 1 11780 12025
YP_009104271.1 NC_025471_p34 lysozyme phrog_7 endolysin lysis 1 23041 23442
YP_009104281.1 NC_025471_p44 hypothetical protein phrog_36200 unknown function unknown function -1 25171 25440
YP_009104269.1 NC_025471_p32 hypothetical protein singleton unknown function unknown function 1 19977 21821
YP_009104245.1 NC_025471_p8 hypothetical protein singleton unknown function unknown function 1 6758 6895
YP_009104265.1 NC_025471_p28 structural protein phrog_384 virion structural protein head and packaging 1 16209 16694
YP_009104263.1 NC_025471_p26 hypothetical protein phrog_4966 unknown function unknown function 1 13785 13952
YP_009104295.1 NC_025471_p58 ATP-dependent DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 29146 31026
YP_009104298.1 NC_025471_p61 ssDNA annealing protein phrog_9002 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 32115 32666
YP_009104250.1 NC_025471_p13 hypothetical protein singleton unknown function unknown function 1 9012 9296
YP_009104299.1 NC_025471_p62 RecA-like NTPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 32687 33472
YP_009104244.1 NC_025471_p7 capsid coat protein phrog_283 major head protein head and packaging 1 5554 6690
YP_009104239.1 NC_025471_p2 large terminase phrog_2 terminase large subunit head and packaging 1 502 1743
YP_009104247.1 NC_025471_p10 hypothetical protein singleton unknown function unknown function 1 7485 7823