Genomic map of Vibrio phage phi-A318 (NC_025822)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025822
Definition
Vibrio phage phi-A318, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Colwellvirinae; Kaohsiungvirus; Vibrio virus A318.
DB of origin
REFSEQ
Length
42544
Host Name
Vibrio alginolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
43.47
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009110742.1 NC_025822_p30 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 22861 23769
YP_009110720.1 NC_025822_p8 hypothetical protein phrog_17960 unknown function unknown function 1 6847 6966
YP_009110713.1 NC_025822_p1 hypothetical protein singleton unknown function unknown function 1 92 214
YP_009110715.1 NC_025822_p3 hypothetical protein phrog_4571 unknown function unknown function 1 1021 1914
YP_009110748.1 NC_025822_p36 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31035 34724
YP_009110719.1 NC_025822_p7 hypothetical protein phrog_16218 unknown function unknown function 1 6350 6847
YP_009110725.1 NC_025822_p13 hypothetical protein phrog_31658 unknown function unknown function 1 12973 13257
YP_009110737.1 NC_025822_p25 hypothetical protein phrog_14692 unknown function unknown function 1 20143 20316
YP_009110743.1 NC_025822_p31 major capsid protein phrog_267 major head protein head and packaging 1 23817 24968
YP_009110739.1 NC_025822_p27 hypothetical protein phrog_1249 acetyltransferase other 1 20584 21048
YP_009110754.1 NC_025822_p42 hypothetical protein phrog_21064 unknown function unknown function 1 40464 40730
YP_009110732.1 NC_025822_p20 hypothetical protein phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16583 17020
YP_009110727.1 NC_025822_p15 hypothetical protein phrog_862 unknown function unknown function 1 13597 14373
YP_009110751.1 NC_025822_p39 large terminase subunit phrog_38 terminase large subunit head and packaging 1 36233 38107
YP_009110722.1 NC_025822_p10 hypothetical protein phrog_15101 unknown function unknown function 1 9130 9594
YP_009110717.1 NC_025822_p5 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 3171 5957
YP_009110721.1 NC_025822_p9 DNA primase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 6997 9093
YP_009110746.1 NC_025822_p34 hypothetical protein phrog_805 internal virion protein head and packaging 1 28323 28928
YP_009110726.1 NC_025822_p14 hypothetical protein singleton unknown function unknown function -1 13395 13511
YP_009110716.1 NC_025822_p4 protein kinase phrog_18305 kinase other 1 1988 2884
YP_009110729.1 NC_025822_p17 hypothetical protein phrog_8057 unknown function unknown function 1 14570 14845
YP_009110723.1 NC_025822_p11 hypothetical protein phrog_20865 unknown function unknown function 1 9663 10253
YP_009110741.1 NC_025822_p29 head portal protein phrog_449 head-tail adaptor connector 1 21233 22861
YP_009110757.1 NC_025822_p45 hypothetical protein phrog_1312 unknown function unknown function 1 41291 41413
YP_009110749.1 NC_025822_p37 K1E endosialidase adaptor protein phrog_2710 tail fiber protein tail 1 34759 35694
YP_009110730.1 NC_025822_p18 hypothetical protein phrog_4429 unknown function unknown function 1 14947 15303
YP_009110735.1 NC_025822_p23 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 18430 18978
YP_009110714.1 NC_025822_p2 hypothetical protein phrog_2226 SAM-dependent methyltransferase other 1 507 941
YP_009110731.1 NC_025822_p19 hypothetical protein singleton unknown function unknown function 1 16306 16599
YP_009110724.1 NC_025822_p12 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 10263 12806
YP_009110755.1 NC_025822_p43 cell wall hydrolase-like protein phrog_938 endolysin lysis 1 40747 41136
YP_009110734.1 NC_025822_p22 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 18102 18437
YP_009110728.1 NC_025822_p16 hypothetical protein phrog_6006 unknown function unknown function 1 14375 14569
YP_009110738.1 NC_025822_p26 hypothetical protein phrog_20076 unknown function unknown function 1 20387 20587
YP_009110744.1 NC_025822_p32 tail protein phrog_446 tail protein tail 1 25042 25689
YP_009110747.1 NC_025822_p35 hypothetical protein phrog_4290 lysozyme domain-containing protein lysis 1 28930 31035
YP_009110740.1 NC_025822_p28 hypothetical protein phrog_9033 unknown function unknown function 1 21048 21224
YP_009110756.1 NC_025822_p44 hypothetical protein phrog_20492 unknown function unknown function 1 41133 41294
YP_009110718.1 NC_025822_p6 hypothetical protein phrog_20635 unknown function unknown function 1 6138 6287
YP_009110733.1 NC_025822_p21 hypothetical protein phrog_221 metallo-phosphoesterase other 1 17020 18036
YP_009110753.1 NC_025822_p41 hypothetical protein singleton unknown function unknown function 1 38781 40457
YP_009110736.1 NC_025822_p24 adenylation DNA ligase-like protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 19109 20107
YP_009110758.1 NC_025822_p46 hypothetical protein singleton unknown function unknown function 1 41805 41942
YP_009110752.1 NC_025822_p40 hypothetical protein phrog_2725 acetyl-CoA acetyltransferase other 1 38301 38576
YP_009110750.1 NC_025822_p38 small terminase subunit-like protein phrog_891 terminase small subunit head and packaging 1 35889 36233
YP_009110745.1 NC_025822_p33 tail protein phrog_457 tail protein tail 1 25692 28313