Genomic map of Enterobacteria phage fd (NC_025824)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_025824
Definition
Enterobacteria phage fd strain 478, complete genome.
Molecule type
ss-DNA
Genome structure
circular
Taxonomy
Viruses; Monodnaviria; Loebvirae; Hofneiviricota; Faserviricetes; Tubulavirales; Inoviridae; Inovirus; unclassified Inovirus.
DB of origin
REFSEQ
Length
6408
Host Name
Enterobacteriaceae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
10
%GC
40.88
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009111297.1 NC_025824_p1 rf replication phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 1 831
YP_009111297.1 NC_025824_p1 rf replication phrog_702 replication protein DNA, RNA and nucleotide metabolism 1 6007 6408
YP_009111300.1 NC_025824_p4 hypothetical protein phrog_7781 minor coat protein head and packaging 1 1108 1209
YP_009111303.1 NC_025824_p7 adsorption protein phrog_8482 attachment protein head and packaging 1 1579 2853
YP_009111306.1 NC_025824_p10 hypothetical protein phrog_1012 assembly (protein IV of M13) head and packaging 1 4221 5501
YP_009111298.1 NC_025824_p2 hypothetical protein phrog_8855 replication protein DNA, RNA and nucleotide metabolism 1 496 831
YP_009111299.1 NC_025824_p3 single-stranded binding protein phrog_1199 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 843 1106
YP_009111305.1 NC_025824_p9 hypothetical protein phrog_1675 morphogenesis (protein I of M13) head and packaging 1 3197 4243
YP_009111302.1 NC_025824_p6 major coat protein phrog_1646 major coat protein head and packaging 1 1301 1522
YP_009111304.1 NC_025824_p8 hypothetical protein phrog_1944 minor head protein head and packaging 1 2856 3194
YP_009111301.1 NC_025824_p5 minor coat protein phrog_10143 minor coat protein head and packaging 1 1206 1304