Genomic map of Mycobacterium phage Sbash (NC_026589)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026589
Definition
Mycobacterium phage Sbash, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chenonavirus.
DB of origin
REFSEQ
Length
55832
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
89
%GC
65.64
Number of singletons
7
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009124692.1 NC_026589_p38 hypothetical protein phrog_30065 unknown function unknown function -1 31815 32519
YP_009124682.1 NC_026589_p28 hypothetical protein phrog_1298 minor tail protein tail 1 25821 26231
YP_009124741.1 NC_026589_p87 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53343 54779
YP_009124707.1 NC_026589_p53 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 39707 40006
YP_009124683.1 NC_026589_p29 hypothetical protein phrog_726 unknown function unknown function 1 26224 26712
YP_009124722.1 NC_026589_p68 hypothetical protein phrog_1495 unknown function unknown function 1 45600 45812
YP_009124732.1 NC_026589_p78 hypothetical protein phrog_3599 unknown function unknown function 1 50081 50605
YP_009124675.1 NC_026589_p21 hypothetical protein phrog_416 minor tail protein tail 1 21030 22079
YP_009124697.1 NC_026589_p43 DNA binding domain protein phrog_6288 unknown function unknown function -1 35175 35894
YP_009124664.1 NC_026589_p10 minor tail protein phrog_2325 minor tail protein tail 1 7504 7950
YP_009124712.1 NC_026589_p58 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 41406 42380
YP_009124716.1 NC_026589_p62 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 43188 43778
YP_009124680.1 NC_026589_p26 lysin B phrog_102 endolysin lysis 1 24238 25410
YP_009124672.1 NC_026589_p18 hypothetical protein phrog_732 minor tail protein tail 1 17456 18310
YP_009124702.1 NC_026589_p48 hypothetical protein phrog_3507 unknown function unknown function 1 37773 38084
YP_009124685.1 NC_026589_p31 hypothetical protein phrog_38328 unknown function unknown function 1 28011 28508
YP_009124705.1 NC_026589_p51 hypothetical protein phrog_20753 unknown function unknown function 1 39223 39507
YP_009124694.1 NC_026589_p40 integrase phrog_1 integrase integration and excision -1 33260 34462
YP_009124734.1 NC_026589_p80 hypothetical protein phrog_2074 unknown function unknown function 1 51476 51787
YP_009124691.1 NC_026589_p37 hypothetical protein singleton unknown function unknown function -1 31621 31773
YP_009124666.1 NC_026589_p12 hypothetical protein phrog_476 major tail protein tail 1 8452 9249
YP_009124659.1 NC_026589_p5 head maturation protease phrog_80 head maturation protease head and packaging 1 3621 4601
YP_009124670.1 NC_026589_p16 minor tail protein phrog_106 minor tail protein tail 1 13938 15665
YP_009124656.1 NC_026589_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 488 2038
YP_009124725.1 NC_026589_p71 hypothetical protein singleton unknown function unknown function 1 46933 47208
YP_009124708.1 NC_026589_p54 hypothetical protein phrog_5806 unknown function unknown function 1 40003 40137
YP_009124717.1 NC_026589_p63 hypothetical protein phrog_3821 unknown function unknown function 1 43775 44047
YP_009124661.1 NC_026589_p7 hypothetical protein phrog_9538 head-tail connector protein connector 1 6305 6583
YP_009124690.1 NC_026589_p36 hypothetical protein phrog_31917 unknown function unknown function 1 30827 31543
YP_009124662.1 NC_026589_p8 hypothetical protein phrog_442 head-tail adaptor connector 1 6564 7112
YP_009124735.1 NC_026589_p81 hypothetical protein singleton unknown function unknown function 1 51759 52070
YP_009124739.1 NC_026589_p85 hypothetical protein phrog_1186 unknown function unknown function 1 52628 53071
YP_009124729.1 NC_026589_p75 hypothetical protein phrog_2451 unknown function unknown function 1 48069 48203
YP_009124730.1 NC_026589_p76 HNH domain protein phrog_14314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48203 49018
YP_009124669.1 NC_026589_p15 tapemeasure phrog_2337 tail length tape measure protein tail 1 10276 13941
YP_009124655.1 NC_026589_p1 hypothetical protein phrog_6975 unknown function unknown function 1 58 516
YP_009124667.1 NC_026589_p13 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 9346 10261
YP_009124742.1 NC_026589_p88 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 54776 55402
YP_009124700.1 NC_026589_p46 hypothetical protein phrog_5253 unknown function unknown function 1 37263 37586
YP_009124740.1 NC_026589_p86 hypothetical protein phrog_24845 unknown function unknown function 1 53068 53346
YP_009124728.1 NC_026589_p74 hypothetical protein phrog_8005 unknown function unknown function 1 47839 48072
YP_009124686.1 NC_026589_p32 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 28601 28849
YP_009124689.1 NC_026589_p35 PPE family domain/Tox-REase-5 domain protein phrog_30407 unknown function unknown function 1 29502 30830
YP_009124657.1 NC_026589_p3 membrane binding domain phrog_16366 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 2064 2252
YP_009124704.1 NC_026589_p50 hypothetical protein phrog_549 unknown function unknown function 1 38735 39223
YP_009124698.1 NC_026589_p44 hypothetical protein phrog_6463 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 36077 36379
YP_009124714.1 NC_026589_p60 hypothetical protein phrog_4387 unknown function unknown function 1 42587 42808
YP_009124709.1 NC_026589_p55 hypothetical protein phrog_14059 unknown function unknown function 1 40134 40346
YP_009124737.1 NC_026589_p83 hypothetical protein phrog_18286 unknown function unknown function 1 52246 52434
YP_009124713.1 NC_026589_p59 hypothetical protein singleton unknown function unknown function 1 42501 42590
YP_009124674.1 NC_026589_p20 hypothetical protein phrog_2235 minor tail protein tail 1 20703 21029
YP_009124699.1 NC_026589_p45 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 36382 37266
YP_009124668.1 NC_026589_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9346 9840
YP_009124721.1 NC_026589_p67 hypothetical protein phrog_5831 unknown function unknown function 1 45146 45598
YP_009124688.1 NC_026589_p34 hypothetical protein singleton unknown function unknown function -1 29100 29231
YP_009124736.1 NC_026589_p82 hypothetical protein phrog_1869 unknown function unknown function 1 52061 52240
YP_009124676.1 NC_026589_p22 hypothetical protein phrog_2269 unknown function unknown function 1 22132 22635
YP_009124723.1 NC_026589_p69 hypothetical protein phrog_2045 unknown function unknown function 1 45812 46789
YP_009124673.1 NC_026589_p19 minor tail protein phrog_3493 minor tail protein tail 1 18307 20691
YP_009124665.1 NC_026589_p11 hypothetical protein phrog_813 head-tail adaptor connector 1 7943 8359
YP_009124731.1 NC_026589_p77 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 49011 50084
YP_009124703.1 NC_026589_p49 hypothetical protein phrog_5015 unknown function unknown function 1 38081 38728
YP_009124720.1 NC_026589_p66 hypothetical protein phrog_2060 DNA methyltransferase other 1 44659 45153
YP_009124684.1 NC_026589_p30 hypothetical protein phrog_36224 unknown function unknown function 1 26933 28051
YP_009124679.1 NC_026589_p25 lysin A phrog_6707 endolysin lysis 1 23300 24235
YP_009124663.1 NC_026589_p9 hypothetical protein phrog_1531 head closure connector 1 7109 7504
YP_009124677.1 NC_026589_p23 hypothetical protein phrog_240 head protein head and packaging 1 22693 23055
YP_009124715.1 NC_026589_p61 RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 42805 43188
YP_009124719.1 NC_026589_p65 hypothetical protein phrog_27856 unknown function unknown function 1 44454 44669
YP_009124695.1 NC_026589_p41 LexA-like repressor phrog_5316 unknown function unknown function -1 34455 34682
YP_009124726.1 NC_026589_p72 hypothetical protein singleton unknown function unknown function 1 47201 47344
YP_009124710.1 NC_026589_p56 hypothetical protein phrog_4702 unknown function unknown function 1 40343 40495
YP_009124738.1 NC_026589_p84 hypothetical protein phrog_6617 unknown function unknown function 1 52431 52631
YP_009124660.1 NC_026589_p6 major capsid protein phrog_10 major head protein head and packaging 1 4598 6223
YP_009124743.1 NC_026589_p89 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55345 55713
YP_009124671.1 NC_026589_p17 minor tail protein phrog_20512 minor tail protein tail 1 15662 17323
YP_009124696.1 NC_026589_p42 IrrE-like protein phrog_87 metallo-protease other -1 34670 35113
YP_009124711.1 NC_026589_p57 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 40492 41409
YP_009124701.1 NC_026589_p47 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 37583 37786
YP_009124658.1 NC_026589_p4 portal protein phrog_12 portal protein head and packaging 1 2249 3649
YP_009124681.1 NC_026589_p27 holin phrog_565 holin lysis 1 25423 25824
YP_009124687.1 NC_026589_p33 hypothetical protein singleton unknown function unknown function -1 28846 29103
YP_009124718.1 NC_026589_p64 hypothetical protein phrog_21446 unknown function unknown function 1 44044 44457
YP_009124678.1 NC_026589_p24 hypothetical protein phrog_1172 unknown function unknown function 1 23052 23234
YP_009124693.1 NC_026589_p39 hypothetical protein phrog_21924 unknown function unknown function -1 32581 32979
YP_009124706.1 NC_026589_p52 hypothetical protein phrog_11875 unknown function unknown function 1 39507 39710
YP_009124724.1 NC_026589_p70 hypothetical protein phrog_1311 unknown function unknown function 1 46782 46940
YP_009124727.1 NC_026589_p73 hypothetical protein phrog_464 unknown function unknown function 1 47394 47846
YP_009124733.1 NC_026589_p79 peptidase phrog_908 unknown function unknown function 1 50602 51504