| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026589 |
Definition |
Mycobacterium phage Sbash, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chenonavirus. |
DB of origin |
REFSEQ |
Length |
55832 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
89 |
%GC |
65.64 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009124692.1 | NC_026589_p38 | hypothetical protein | phrog_30065 | unknown function | unknown function | -1 | 31815 | 32519 |
| YP_009124682.1 | NC_026589_p28 | hypothetical protein | phrog_1298 | minor tail protein | tail | 1 | 25821 | 26231 |
| YP_009124741.1 | NC_026589_p87 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53343 | 54779 |
| YP_009124707.1 | NC_026589_p53 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 39707 | 40006 |
| YP_009124683.1 | NC_026589_p29 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 26224 | 26712 |
| YP_009124722.1 | NC_026589_p68 | hypothetical protein | phrog_1495 | unknown function | unknown function | 1 | 45600 | 45812 |
| YP_009124732.1 | NC_026589_p78 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 50081 | 50605 |
| YP_009124675.1 | NC_026589_p21 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21030 | 22079 |
| YP_009124697.1 | NC_026589_p43 | DNA binding domain protein | phrog_6288 | unknown function | unknown function | -1 | 35175 | 35894 |
| YP_009124664.1 | NC_026589_p10 | minor tail protein | phrog_2325 | minor tail protein | tail | 1 | 7504 | 7950 |
| YP_009124712.1 | NC_026589_p58 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41406 | 42380 |
| YP_009124716.1 | NC_026589_p62 | hypothetical protein | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 43188 | 43778 |
| YP_009124680.1 | NC_026589_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 24238 | 25410 |
| YP_009124672.1 | NC_026589_p18 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 17456 | 18310 |
| YP_009124702.1 | NC_026589_p48 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 37773 | 38084 |
| YP_009124685.1 | NC_026589_p31 | hypothetical protein | phrog_38328 | unknown function | unknown function | 1 | 28011 | 28508 |
| YP_009124705.1 | NC_026589_p51 | hypothetical protein | phrog_20753 | unknown function | unknown function | 1 | 39223 | 39507 |
| YP_009124694.1 | NC_026589_p40 | integrase | phrog_1 | integrase | integration and excision | -1 | 33260 | 34462 |
| YP_009124734.1 | NC_026589_p80 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 51476 | 51787 |
| YP_009124691.1 | NC_026589_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31621 | 31773 |
| YP_009124666.1 | NC_026589_p12 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 8452 | 9249 |
| YP_009124659.1 | NC_026589_p5 | head maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3621 | 4601 |
| YP_009124670.1 | NC_026589_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13938 | 15665 |
| YP_009124656.1 | NC_026589_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 488 | 2038 |
| YP_009124725.1 | NC_026589_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46933 | 47208 |
| YP_009124708.1 | NC_026589_p54 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 40003 | 40137 |
| YP_009124717.1 | NC_026589_p63 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 43775 | 44047 |
| YP_009124661.1 | NC_026589_p7 | hypothetical protein | phrog_9538 | head-tail connector protein | connector | 1 | 6305 | 6583 |
| YP_009124690.1 | NC_026589_p36 | hypothetical protein | phrog_31917 | unknown function | unknown function | 1 | 30827 | 31543 |
| YP_009124662.1 | NC_026589_p8 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 6564 | 7112 |
| YP_009124735.1 | NC_026589_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51759 | 52070 |
| YP_009124739.1 | NC_026589_p85 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52628 | 53071 |
| YP_009124729.1 | NC_026589_p75 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 48069 | 48203 |
| YP_009124730.1 | NC_026589_p76 | HNH domain protein | phrog_14314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48203 | 49018 |
| YP_009124669.1 | NC_026589_p15 | tapemeasure | phrog_2337 | tail length tape measure protein | tail | 1 | 10276 | 13941 |
| YP_009124655.1 | NC_026589_p1 | hypothetical protein | phrog_6975 | unknown function | unknown function | 1 | 58 | 516 |
| YP_009124667.1 | NC_026589_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9346 | 10261 |
| YP_009124742.1 | NC_026589_p88 | hypothetical protein | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54776 | 55402 |
| YP_009124700.1 | NC_026589_p46 | hypothetical protein | phrog_5253 | unknown function | unknown function | 1 | 37263 | 37586 |
| YP_009124740.1 | NC_026589_p86 | hypothetical protein | phrog_24845 | unknown function | unknown function | 1 | 53068 | 53346 |
| YP_009124728.1 | NC_026589_p74 | hypothetical protein | phrog_8005 | unknown function | unknown function | 1 | 47839 | 48072 |
| YP_009124686.1 | NC_026589_p32 | hypothetical protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28601 | 28849 |
| YP_009124689.1 | NC_026589_p35 | PPE family domain/Tox-REase-5 domain protein | phrog_30407 | unknown function | unknown function | 1 | 29502 | 30830 |
| YP_009124657.1 | NC_026589_p3 | membrane binding domain | phrog_16366 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 2064 | 2252 |
| YP_009124704.1 | NC_026589_p50 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 38735 | 39223 |
| YP_009124698.1 | NC_026589_p44 | hypothetical protein | phrog_6463 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36077 | 36379 |
| YP_009124714.1 | NC_026589_p60 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 42587 | 42808 |
| YP_009124709.1 | NC_026589_p55 | hypothetical protein | phrog_14059 | unknown function | unknown function | 1 | 40134 | 40346 |
| YP_009124737.1 | NC_026589_p83 | hypothetical protein | phrog_18286 | unknown function | unknown function | 1 | 52246 | 52434 |
| YP_009124713.1 | NC_026589_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42501 | 42590 |
| YP_009124674.1 | NC_026589_p20 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 20703 | 21029 |
| YP_009124699.1 | NC_026589_p45 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 36382 | 37266 |
| YP_009124668.1 | NC_026589_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9346 | 9840 |
| YP_009124721.1 | NC_026589_p67 | hypothetical protein | phrog_5831 | unknown function | unknown function | 1 | 45146 | 45598 |
| YP_009124688.1 | NC_026589_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29100 | 29231 |
| YP_009124736.1 | NC_026589_p82 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 52061 | 52240 |
| YP_009124676.1 | NC_026589_p22 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 22132 | 22635 |
| YP_009124723.1 | NC_026589_p69 | hypothetical protein | phrog_2045 | unknown function | unknown function | 1 | 45812 | 46789 |
| YP_009124673.1 | NC_026589_p19 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 18307 | 20691 |
| YP_009124665.1 | NC_026589_p11 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7943 | 8359 |
| YP_009124731.1 | NC_026589_p77 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 49011 | 50084 |
| YP_009124703.1 | NC_026589_p49 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 38081 | 38728 |
| YP_009124720.1 | NC_026589_p66 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 44659 | 45153 |
| YP_009124684.1 | NC_026589_p30 | hypothetical protein | phrog_36224 | unknown function | unknown function | 1 | 26933 | 28051 |
| YP_009124679.1 | NC_026589_p25 | lysin A | phrog_6707 | endolysin | lysis | 1 | 23300 | 24235 |
| YP_009124663.1 | NC_026589_p9 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 7109 | 7504 |
| YP_009124677.1 | NC_026589_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22693 | 23055 |
| YP_009124715.1 | NC_026589_p61 | RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 42805 | 43188 |
| YP_009124719.1 | NC_026589_p65 | hypothetical protein | phrog_27856 | unknown function | unknown function | 1 | 44454 | 44669 |
| YP_009124695.1 | NC_026589_p41 | LexA-like repressor | phrog_5316 | unknown function | unknown function | -1 | 34455 | 34682 |
| YP_009124726.1 | NC_026589_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47201 | 47344 |
| YP_009124710.1 | NC_026589_p56 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 40343 | 40495 |
| YP_009124738.1 | NC_026589_p84 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 52431 | 52631 |
| YP_009124660.1 | NC_026589_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4598 | 6223 |
| YP_009124743.1 | NC_026589_p89 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55345 | 55713 |
| YP_009124671.1 | NC_026589_p17 | minor tail protein | phrog_20512 | minor tail protein | tail | 1 | 15662 | 17323 |
| YP_009124696.1 | NC_026589_p42 | IrrE-like protein | phrog_87 | metallo-protease | other | -1 | 34670 | 35113 |
| YP_009124711.1 | NC_026589_p57 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 40492 | 41409 |
| YP_009124701.1 | NC_026589_p47 | HTH DNA binding domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 37583 | 37786 |
| YP_009124658.1 | NC_026589_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2249 | 3649 |
| YP_009124681.1 | NC_026589_p27 | holin | phrog_565 | holin | lysis | 1 | 25423 | 25824 |
| YP_009124687.1 | NC_026589_p33 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28846 | 29103 |
| YP_009124718.1 | NC_026589_p64 | hypothetical protein | phrog_21446 | unknown function | unknown function | 1 | 44044 | 44457 |
| YP_009124678.1 | NC_026589_p24 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 23052 | 23234 |
| YP_009124693.1 | NC_026589_p39 | hypothetical protein | phrog_21924 | unknown function | unknown function | -1 | 32581 | 32979 |
| YP_009124706.1 | NC_026589_p52 | hypothetical protein | phrog_11875 | unknown function | unknown function | 1 | 39507 | 39710 |
| YP_009124724.1 | NC_026589_p70 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 46782 | 46940 |
| YP_009124727.1 | NC_026589_p73 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 47394 | 47846 |
| YP_009124733.1 | NC_026589_p79 | peptidase | phrog_908 | unknown function | unknown function | 1 | 50602 | 51504 |