Genomic map of Mycobacterium phage Gaia (NC_026590)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026590
Definition
Mycobacterium phage Gaia, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gaiavirus.
DB of origin
REFSEQ
Length
90460
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
179
%GC
56.83
Number of singletons
73
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009124775.1 NC_026590_p32 lysin A phrog_317 endolysin lysis 1 28916 30328
YP_009124913.1 NC_026590_p170 hypothetical protein phrog_2247 unknown function unknown function 1 86893 87201
YP_009124843.1 NC_026590_p100 hypothetical protein singleton unknown function unknown function 1 58100 58288
YP_009124903.1 NC_026590_p160 hypothetical protein singleton unknown function unknown function -1 82080 82250
YP_009124756.1 NC_026590_p13 minor tail protein phrog_106 minor tail protein tail 1 13325 14437
YP_009124887.1 NC_026590_p144 hypothetical protein singleton unknown function unknown function 1 77600 77773
YP_009124879.1 NC_026590_p136 hypothetical protein phrog_3699 unknown function unknown function 1 75003 75254
YP_009124784.1 NC_026590_p41 hypothetical protein singleton unknown function unknown function -1 33185 33301
YP_009124876.1 NC_026590_p133 hypothetical protein singleton unknown function unknown function -1 73128 73661
YP_009124812.1 NC_026590_p69 hydrolase phrog_3341 esterase other 1 45702 46484
YP_009124789.1 NC_026590_p46 hypothetical protein phrog_722 unknown function unknown function -1 35284 35733
YP_009124851.1 NC_026590_p108 RepA-like helicase phrog_6012 DNA helicase DNA, RNA and nucleotide metabolism 1 62879 64297
YP_009124813.1 NC_026590_p70 hypothetical protein singleton unknown function unknown function 1 46484 46933
YP_009124821.1 NC_026590_p78 hypothetical protein phrog_6638 unknown function unknown function 1 48950 49252
YP_009124751.1 NC_026590_p8 hypothetical protein phrog_387 neck protein connector 1 7366 7629
YP_009124909.1 NC_026590_p166 hypothetical protein phrog_7999 unknown function unknown function 1 84236 85009
YP_009124758.1 NC_026590_p15 hypothetical protein singleton unknown function unknown function -1 14694 14999
YP_009124809.1 NC_026590_p66 hypothetical protein phrog_950 unknown function unknown function -1 44038 44826
YP_009124785.1 NC_026590_p42 hypothetical protein phrog_6527 unknown function unknown function -1 33320 33487
YP_009124902.1 NC_026590_p159 hypothetical protein singleton unknown function unknown function -1 81962 82054
YP_009124883.1 NC_026590_p140 hypothetical protein phrog_2296 unknown function unknown function 1 76306 76485
YP_009124746.1 NC_026590_p3 portal protein phrog_104 portal protein head and packaging 1 3366 4799
YP_009124762.1 NC_026590_p19 hypothetical protein phrog_1697 minor tail protein tail 1 17700 18209
YP_009124837.1 NC_026590_p94 hypothetical protein phrog_5254 unknown function unknown function 1 56901 57137
YP_009124894.1 NC_026590_p151 hypothetical protein singleton unknown function unknown function -1 80335 80526
YP_009124863.1 NC_026590_p120 hypothetical protein phrog_29537 unknown function unknown function 1 67824 68087
YP_009124842.1 NC_026590_p99 hypothetical protein singleton unknown function unknown function 1 57809 58090
YP_009124780.1 NC_026590_p37 hypothetical protein singleton unknown function unknown function -1 32384 32527
YP_009124771.1 NC_026590_p28 HTH domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 27635 27832
YP_009124796.1 NC_026590_p53 hypothetical protein singleton unknown function unknown function -1 39249 39584
YP_009124757.1 NC_026590_p14 minor tail protein phrog_1736 minor tail protein tail 1 14447 14725
YP_009124912.1 NC_026590_p169 hypothetical protein singleton unknown function unknown function 1 86243 86893
YP_009124830.1 NC_026590_p87 recombination endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 51215 51658
YP_009124891.1 NC_026590_p148 hypothetical protein singleton unknown function unknown function -1 79743 79949
YP_009124895.1 NC_026590_p152 hypothetical protein phrog_2632 unknown function unknown function -1 80540 80770
YP_009124854.1 NC_026590_p111 nucleotide hydrolase phrog_2174 unknown function unknown function 1 64674 65045
YP_009124885.1 NC_026590_p142 metallophosphoesterase phrog_1649 metallo-phosphoesterase other 1 76632 77390
YP_009124862.1 NC_026590_p119 hypothetical protein singleton unknown function unknown function 1 67566 67805
YP_009124779.1 NC_026590_p36 hypothetical protein phrog_404 minor tail protein tail 1 31870 32178
YP_009124855.1 NC_026590_p112 hypothetical protein singleton unknown function unknown function 1 65042 65242
YP_009124769.1 NC_026590_p26 minor tail protein phrog_2012 minor tail protein tail 1 26169 26807
YP_009124852.1 NC_026590_p109 hypothetical protein singleton unknown function unknown function 1 64325 64438
YP_009124802.1 NC_026590_p59 hypothetical protein singleton unknown function unknown function -1 41364 41549
YP_009124910.1 NC_026590_p167 methyl transferase phrog_2675 DNA methyltransferase other 1 85006 85587
YP_009124907.1 NC_026590_p164 hypothetical protein phrog_11690 tail protein tail 1 83537 83929
YP_009124807.1 NC_026590_p64 hypothetical protein singleton unknown function unknown function -1 43352 43408
YP_009124817.1 NC_026590_p74 hypothetical protein singleton unknown function unknown function 1 48270 48437
YP_009124791.1 NC_026590_p48 hypothetical protein singleton unknown function unknown function -1 36226 36555
YP_009124774.1 NC_026590_p31 hypothetical protein singleton unknown function unknown function 1 28618 28908
YP_009124787.1 NC_026590_p44 hypothetical protein phrog_4334 unknown function unknown function -1 34162 34593
YP_009124828.1 NC_026590_p85 hypothetical protein phrog_15197 unknown function unknown function 1 50640 50918
YP_009124869.1 NC_026590_p126 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 69941 70507
YP_009124868.1 NC_026590_p125 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 69600 69944
YP_009124860.1 NC_026590_p117 ClpP phrog_94 head maturation protease head and packaging 1 66289 66987
YP_009124803.1 NC_026590_p60 hypothetical protein phrog_4319 unknown function unknown function -1 41546 41815
YP_009124833.1 NC_026590_p90 hypothetical protein singleton unknown function unknown function 1 54636 54818
YP_009124901.1 NC_026590_p158 hypothetical protein singleton unknown function unknown function -1 81790 81951
YP_009124853.1 NC_026590_p110 hypothetical protein singleton unknown function unknown function 1 64422 64637
YP_009124897.1 NC_026590_p154 hypothetical protein singleton unknown function unknown function -1 81097 81204
YP_009124810.1 NC_026590_p67 transcriptional regulator singleton unknown function unknown function -1 44870 45262
YP_009124920.1 NC_026590_p177 hypothetical protein singleton unknown function unknown function -1 88523 88819
YP_009124914.1 NC_026590_p171 hypothetical protein singleton unknown function unknown function 1 87202 87525
YP_009124750.1 NC_026590_p7 hypothetical protein phrog_763 head-tail adaptor connector 1 7028 7366
YP_009124827.1 NC_026590_p84 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50308 50631
YP_009124808.1 NC_026590_p65 HTH domain protein singleton unknown function unknown function -1 43390 43980
YP_009124744.1 NC_026590_p1 hypothetical protein phrog_226 minor tail protein tail 1 129 578
YP_009124892.1 NC_026590_p149 hypothetical protein singleton unknown function unknown function -1 79958 80110
YP_009124866.1 NC_026590_p123 hypothetical protein phrog_1042 unknown function unknown function 1 69033 69269
YP_009124840.1 NC_026590_p97 hypothetical protein phrog_33588 unknown function unknown function 1 57458 57682
YP_009124783.1 NC_026590_p40 hypothetical protein singleton unknown function unknown function -1 33037 33177
YP_009124815.1 NC_026590_p72 hypothetical protein singleton unknown function unknown function 1 47612 47761
YP_009124818.1 NC_026590_p75 hypothetical protein singleton unknown function unknown function 1 48434 48559
YP_009124793.1 NC_026590_p50 hypothetical protein phrog_1546 unknown function unknown function -1 36913 37260
YP_009124838.1 NC_026590_p95 hypothetical protein singleton unknown function unknown function 1 57137 57241
YP_009124801.1 NC_026590_p58 hypothetical protein singleton unknown function unknown function -1 41008 41367
YP_009124835.1 NC_026590_p92 hypothetical protein phrog_6706 unknown function unknown function 1 55398 56102
YP_009124768.1 NC_026590_p25 minor tail protein phrog_2005 minor tail protein tail 1 25899 26153
YP_009124795.1 NC_026590_p52 integrase phrog_1 integrase integration and excision 1 37562 38833
YP_009124916.1 NC_026590_p173 hypothetical protein singleton unknown function unknown function 1 87682 87918
YP_009124848.1 NC_026590_p105 hypothetical protein singleton unknown function unknown function 1 61858 62256
YP_009124790.1 NC_026590_p47 hypothetical protein singleton unknown function unknown function -1 35730 36098
YP_009124823.1 NC_026590_p80 hypothetical protein phrog_10735 unknown function unknown function 1 49397 49564
YP_009124776.1 NC_026590_p33 hypothetical protein phrog_2424 unknown function unknown function 1 30328 30708
YP_009124893.1 NC_026590_p150 hypothetical protein phrog_2437 unknown function unknown function -1 80192 80338
YP_009124829.1 NC_026590_p86 hypothetical protein phrog_2857 tail fiber protein tail 1 50934 51218
YP_009124836.1 NC_026590_p93 polymerase primase phrog_5852 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 56162 56917
YP_009124752.1 NC_026590_p9 minor tail protein phrog_123 tail terminator connector 1 7642 8013
YP_009124877.1 NC_026590_p134 hypothetical protein singleton unknown function unknown function -1 73658 73852
YP_009124745.1 NC_026590_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 559 3372
YP_009124753.1 NC_026590_p10 tail assembly chaperone phrog_117 major tail protein tail 1 8073 8660
YP_009124798.1 NC_026590_p55 hypothetical protein phrog_780 unknown function unknown function -1 40042 40287
YP_009124890.1 NC_026590_p147 hypothetical protein singleton unknown function unknown function -1 79379 79729
YP_009124867.1 NC_026590_p124 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 69310 69603
YP_009124845.1 NC_026590_p102 PAPS reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 59268 60608
YP_009124904.1 NC_026590_p161 hypothetical protein singleton unknown function unknown function -1 82260 82979
YP_009124811.1 NC_026590_p68 HTH binding protein singleton transcriptional repressor transcription regulation 1 45400 45705
YP_009124826.1 NC_026590_p83 hypothetical protein singleton unknown function unknown function 1 50207 50311
YP_009124747.1 NC_026590_p4 hypothetical protein phrog_9857 head scaffolding protein head and packaging 1 4842 5501
YP_009124767.1 NC_026590_p24 minor tail protein phrog_240 head protein head and packaging 1 25558 25899
YP_009124896.1 NC_026590_p153 hypothetical protein singleton unknown function unknown function -1 80852 81100
YP_009124861.1 NC_026590_p118 DnaQ-like exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 67024 67569
YP_009124799.1 NC_026590_p56 hypothetical protein phrog_780 unknown function unknown function -1 40414 40635
YP_009124844.1 NC_026590_p101 helicase phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 58347 59243
YP_009124870.1 NC_026590_p127 hypothetical protein singleton unknown function unknown function 1 70504 70689
YP_009124794.1 NC_026590_p51 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 37257 37454
YP_009124882.1 NC_026590_p139 restriction endonuclease, HNH endonuclease domain phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 75742 76296
YP_009124898.1 NC_026590_p155 hypothetical protein singleton unknown function unknown function -1 81218 81358
YP_009124884.1 NC_026590_p141 hypothetical protein phrog_6972 unknown function unknown function 1 76473 76628
YP_009124786.1 NC_026590_p43 Lsr2-like protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33491 33889
YP_009124918.1 NC_026590_p175 hypothetical protein singleton unknown function unknown function 1 88104 88262
YP_009124922.1 NC_026590_p179 hypothetical protein phrog_2830 unknown function unknown function 1 89326 89757
YP_009124899.1 NC_026590_p156 hypothetical protein singleton unknown function unknown function -1 81355 81495
YP_009124825.1 NC_026590_p82 hypothetical protein phrog_1389 unknown function unknown function 1 49827 50210
YP_009124881.1 NC_026590_p138 hypothetical protein phrog_6690 unknown function unknown function 1 75549 75773
YP_009124782.1 NC_026590_p39 hypothetical protein singleton unknown function unknown function -1 32737 33000
YP_009124872.1 NC_026590_p129 hypothetical protein singleton unknown function unknown function 1 71533 71631
YP_009124770.1 NC_026590_p27 minor tail protein phrog_754 minor tail protein tail 1 26804 27628
YP_009124748.1 NC_026590_p5 major capsid phrog_1328 major head protein head and packaging 1 5514 6485
YP_009124816.1 NC_026590_p73 hypothetical protein phrog_6612 unknown function unknown function 1 47814 48068
YP_009124749.1 NC_026590_p6 hypothetical protein phrog_1290 head-tail adaptor connector 1 6666 7031
YP_009124873.1 NC_026590_p130 hypothetical protein singleton unknown function unknown function 1 71612 71809
YP_009124849.1 NC_026590_p106 hypothetical protein singleton unknown function unknown function 1 62243 62443
YP_009124905.1 NC_026590_p162 hypothetical protein singleton unknown function unknown function -1 82976 83260
YP_009124814.1 NC_026590_p71 WhiB phrog_1333 unknown function unknown function 1 46921 47298
YP_009124788.1 NC_026590_p45 hypothetical protein phrog_2021 unknown function unknown function -1 34995 35291
YP_009124917.1 NC_026590_p174 hypothetical protein singleton unknown function unknown function 1 87915 88049
YP_009124764.1 NC_026590_p21 minor tail protein phrog_346 minor tail protein tail 1 19931 22501
YP_009124864.1 NC_026590_p121 hypothetical protein phrog_6611 unknown function unknown function 1 68078 68632
YP_009124773.1 NC_026590_p30 DNA binding domain protein phrog_20467 HNH endonuclease DNA, RNA and nucleotide metabolism -1 28277 28627
YP_009124824.1 NC_026590_p81 hypothetical protein phrog_5905 unknown function unknown function 1 49561 49815
YP_009124778.1 NC_026590_p35 hypothetical protein phrog_17495 membrane protein moron, auxiliary metabolic gene and host takeover 1 31586 31867
YP_009124819.1 NC_026590_p76 hypothetical protein singleton unknown function unknown function 1 48560 48787
YP_009124755.1 NC_026590_p12 tapemeasure phrog_9228 tail length tape measure protein tail 1 9452 13315
YP_009124805.1 NC_026590_p62 hypothetical protein phrog_11926 unknown function unknown function -1 42097 42822
YP_009124857.1 NC_026590_p114 hypothetical protein phrog_20581 unknown function unknown function 1 65557 65751
YP_009124859.1 NC_026590_p116 hypothetical protein singleton unknown function unknown function 1 66144 66296
YP_009124754.1 NC_026590_p11 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 8760 9442
YP_009124841.1 NC_026590_p98 hypothetical protein singleton unknown function unknown function 1 57699 57812
YP_009124865.1 NC_026590_p122 hypothetical protein singleton unknown function unknown function 1 68884 69036
YP_009124875.1 NC_026590_p132 hypothetical protein singleton unknown function unknown function 1 72837 73025
YP_009124804.1 NC_026590_p61 hypothetical protein singleton unknown function unknown function -1 41897 42094
YP_009124831.1 NC_026590_p88 hypothetical protein phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 51713 53695
YP_009124846.1 NC_026590_p103 ectoine synthase/ParB multidomain protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 60605 61504
YP_009124888.1 NC_026590_p145 hypothetical protein phrog_10659 unknown function unknown function 1 77990 78283
YP_009124797.1 NC_026590_p54 hypothetical protein singleton unknown function unknown function -1 39581 40045
YP_009124765.1 NC_026590_p22 minor tail, D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 22498 24378
YP_009124800.1 NC_026590_p57 hypothetical protein phrog_21321 unknown function unknown function -1 40766 41011
YP_009124832.1 NC_026590_p89 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 53810 54535
YP_009124878.1 NC_026590_p135 hypothetical protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 73876 74976
YP_009124781.1 NC_026590_p38 hypothetical protein singleton unknown function unknown function -1 32502 32699
YP_009124858.1 NC_026590_p115 hypothetical protein singleton unknown function unknown function 1 65744 66151
YP_009124763.1 NC_026590_p20 minor tail protein phrog_1565 minor tail protein tail 1 18190 19884
YP_009124777.1 NC_026590_p34 lysin B phrog_102 endolysin lysis 1 30705 31589
YP_009124760.1 NC_026590_p17 homoendonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 16945 17430
YP_009124906.1 NC_026590_p163 hypothetical protein singleton unknown function unknown function -1 83254 83487
YP_009124766.1 NC_026590_p23 minor tail protein phrog_2106 minor tail protein tail 1 24381 25535
YP_009124856.1 NC_026590_p113 hypothetical protein singleton unknown function unknown function 1 65252 65560
YP_009124871.1 NC_026590_p128 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 70703 71533
YP_009124792.1 NC_026590_p49 hypothetical protein phrog_2060 DNA methyltransferase other -1 36548 36916
YP_009124839.1 NC_026590_p96 hypothetical protein singleton unknown function unknown function 1 57238 57465
YP_009124850.1 NC_026590_p107 hypothetical protein singleton unknown function unknown function -1 62597 62794
YP_009124847.1 NC_026590_p104 hypothetical protein singleton unknown function unknown function 1 61494 61868
YP_009124834.1 NC_026590_p91 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54832 55401
YP_009124759.1 NC_026590_p16 minor tail protein phrog_110 minor tail protein tail 1 15059 16948
YP_009124820.1 NC_026590_p77 hypothetical protein phrog_10735 unknown function unknown function 1 48780 48950
YP_009124919.1 NC_026590_p176 hypothetical protein singleton unknown function unknown function -1 88309 88497
YP_009124911.1 NC_026590_p168 hydrolase phrog_7153 zinc-finger protease other 1 85631 86221
YP_009124889.1 NC_026590_p146 hypothetical protein phrog_16479 unknown function unknown function -1 79067 79291
YP_009124886.1 NC_026590_p143 hypothetical protein phrog_4319 unknown function unknown function 1 77393 77599
YP_009124822.1 NC_026590_p79 hypothetical protein phrog_2221 unknown function unknown function 1 49249 49404
YP_009124880.1 NC_026590_p137 hypothetical protein phrog_6536 unknown function unknown function 1 75319 75552
YP_009124874.1 NC_026590_p131 hypothetical protein singleton unknown function unknown function 1 71995 72840
YP_009124772.1 NC_026590_p29 hypothetical protein phrog_411 unknown function unknown function 1 27981 28280
YP_009124761.1 NC_026590_p18 homoendonuclease phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 17322 17690
YP_009124900.1 NC_026590_p157 hypothetical protein phrog_5419 unknown function unknown function -1 81578 81793
YP_009124915.1 NC_026590_p172 hypothetical protein singleton unknown function unknown function 1 87518 87685
YP_009124806.1 NC_026590_p63 hypothetical protein singleton unknown function unknown function -1 43046 43291
YP_009124921.1 NC_026590_p178 hypothetical protein phrog_2883 unknown function unknown function -1 88846 89217
YP_009124908.1 NC_026590_p165 homing endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 83930 84226