| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026594 |
Definition |
Pseudomonas phage vB_PaeS_PAO1_Ab18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abidjanvirus. |
DB of origin |
REFSEQ |
Length |
56537 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
63.49 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125144.1 | NC_026594_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29587 | 29871 |
| YP_009125139.1 | NC_026594_p36 | hypothetical protein | phrog_10855 | hydrolase | other | 1 | 27695 | 28246 |
| YP_009125116.1 | NC_026594_p13 | hypothetical protein | phrog_2396 | unknown function | unknown function | 1 | 11625 | 12512 |
| YP_009125129.1 | NC_026594_p26 | hypothetical protein | phrog_7569 | unknown function | unknown function | 1 | 22239 | 22619 |
| YP_009125161.1 | NC_026594_p58 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 41381 | 41770 |
| YP_009125154.1 | NC_026594_p51 | hypothetical protein | phrog_22916 | unknown function | unknown function | 1 | 37573 | 37848 |
| YP_009125106.1 | NC_026594_p3 | hypothetical protein | phrog_2378 | unknown function | unknown function | 1 | 2526 | 3077 |
| YP_009125158.1 | NC_026594_p55 | hypothetical protein | phrog_6213 | unknown function | unknown function | 1 | 40166 | 40609 |
| YP_009125150.1 | NC_026594_p47 | hypothetical protein | phrog_145 | portal protein | head and packaging | 1 | 33779 | 35275 |
| YP_009125155.1 | NC_026594_p52 | hypothetical protein | phrog_20571 | unknown function | unknown function | 1 | 37901 | 38068 |
| YP_009125162.1 | NC_026594_p59 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 41772 | 42170 |
| YP_009125133.1 | NC_026594_p30 | hypothetical protein | phrog_3633 | unknown function | unknown function | 1 | 23971 | 24264 |
| YP_009125111.1 | NC_026594_p8 | hypothetical protein | phrog_7790 | unknown function | unknown function | 1 | 8349 | 8843 |
| YP_009125170.1 | NC_026594_p67 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 49266 | 50933 |
| YP_009125117.1 | NC_026594_p14 | thymidylate synthase | phrog_5131 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 12516 | 13562 |
| YP_009125123.1 | NC_026594_p20 | hypothetical protein | phrog_2165 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 17682 | 18107 |
| YP_009125122.1 | NC_026594_p19 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 17153 | 17689 |
| YP_009125160.1 | NC_026594_p57 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 40849 | 41379 |
| YP_009125137.1 | NC_026594_p34 | hypothetical protein | phrog_6077 | unknown function | unknown function | 1 | 26249 | 27340 |
| YP_009125120.1 | NC_026594_p17 | hypothetical protein | phrog_22852 | unknown function | unknown function | 1 | 14662 | 15216 |
| YP_009125136.1 | NC_026594_p33 | hypothetical protein | phrog_8293 | unknown function | unknown function | 1 | 26003 | 26221 |
| YP_009125168.1 | NC_026594_p65 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 46723 | 48252 |
| YP_009125107.1 | NC_026594_p4 | hypothetical protein | phrog_2402 | unknown function | unknown function | 1 | 3185 | 4024 |
| YP_009125156.1 | NC_026594_p53 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 38177 | 38965 |
| YP_009125141.1 | NC_026594_p38 | hypothetical protein | phrog_33726 | unknown function | unknown function | 1 | 28488 | 28712 |
| YP_009125138.1 | NC_026594_p35 | hypothetical protein | phrog_31477 | unknown function | unknown function | 1 | 27340 | 27702 |
| YP_009125149.1 | NC_026594_p46 | terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 32233 | 33723 |
| YP_009125174.1 | NC_026594_p71 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 52172 | 54346 |
| YP_009125135.1 | NC_026594_p32 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 25020 | 25925 |
| YP_009125112.1 | NC_026594_p9 | hypothetical protein | phrog_6364 | unknown function | unknown function | 1 | 8896 | 9777 |
| YP_009125172.1 | NC_026594_p69 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 51752 | 51985 |
| YP_009125167.1 | NC_026594_p64 | tail length tape-measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 44235 | 46712 |
| YP_009125127.1 | NC_026594_p24 | hypothetical protein | phrog_26943 | unknown function | unknown function | 1 | 21064 | 21513 |
| YP_009125119.1 | NC_026594_p16 | hypothetical protein | phrog_5839 | unknown function | unknown function | 1 | 14165 | 14605 |
| YP_009125151.1 | NC_026594_p48 | minor head protein | phrog_241 | head morphogenesis | head and packaging | 1 | 35275 | 36522 |
| YP_009125125.1 | NC_026594_p22 | integrase | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 18393 | 20768 |
| YP_009125131.1 | NC_026594_p28 | hypothetical protein | phrog_8514 | unknown function | unknown function | 1 | 23015 | 23590 |
| YP_009125152.1 | NC_026594_p49 | ATPase | phrog_170 | PhoH-like phosphate starvation-inducible | other | 1 | 36568 | 37269 |
| YP_009125109.1 | NC_026594_p6 | Ribonucleotide reductase of class Ia | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 5351 | 6412 |
| YP_009125163.1 | NC_026594_p60 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 42167 | 42577 |
| YP_009125105.1 | NC_026594_p2 | hypothetical protein | phrog_5888 | unknown function | unknown function | 1 | 2075 | 2437 |
| YP_009125153.1 | NC_026594_p50 | hypothetical protein | phrog_23157 | unknown function | unknown function | 1 | 37285 | 37494 |
| YP_009125114.1 | NC_026594_p11 | hypothetical protein | phrog_1249 | acetyltransferase | other | 1 | 10627 | 11052 |
| YP_009125121.1 | NC_026594_p18 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 15216 | 17156 |
| YP_009125159.1 | NC_026594_p56 | hypothetical protein | phrog_19293 | virion structural protein | head and packaging | 1 | 40613 | 40843 |
| YP_009125142.1 | NC_026594_p39 | hypothetical protein | phrog_22459 | unknown function | unknown function | 1 | 28684 | 28908 |
| YP_009125124.1 | NC_026594_p21 | repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 18065 | 18406 |
| YP_009125169.1 | NC_026594_p66 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 48264 | 49265 |
| YP_009125145.1 | NC_026594_p42 | hypothetical protein | phrog_755 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 29868 | 30263 |
| YP_009125148.1 | NC_026594_p45 | hypothetical protein | phrog_4044 | terminase small subunit | head and packaging | 1 | 31721 | 32236 |
| YP_009125157.1 | NC_026594_p54 | major structural protein | phrog_212 | major head protein | head and packaging | 1 | 39106 | 40026 |
| YP_009125178.1 | NC_026594_p75 | hypothetical protein | phrog_1356 | holin | lysis | 1 | 55799 | 56011 |
| YP_009125128.1 | NC_026594_p25 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 21563 | 22246 |
| YP_009125165.1 | NC_026594_p62 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 43527 | 43964 |
| YP_009125126.1 | NC_026594_p23 | hypothetical protein | phrog_27372 | unknown function | unknown function | 1 | 20768 | 20974 |
| YP_009125115.1 | NC_026594_p12 | hypothetical protein | phrog_800 | terminase small subunit | head and packaging | 1 | 11056 | 11625 |
| YP_009125164.1 | NC_026594_p61 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 42589 | 43527 |
| YP_009125140.1 | NC_026594_p37 | hypothetical protein | phrog_3958 | unknown function | unknown function | 1 | 28243 | 28500 |
| YP_009125177.1 | NC_026594_p74 | baseplate hub subunit and tail lysozyme | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 55242 | 55748 |
| YP_009125132.1 | NC_026594_p29 | hypothetical protein | phrog_22281 | unknown function | unknown function | 1 | 23625 | 23870 |
| YP_009125113.1 | NC_026594_p10 | hypothetical protein | phrog_16743 | unknown function | unknown function | 1 | 9770 | 10630 |
| YP_009125179.1 | NC_026594_p76 | hypothetical protein | phrog_2466 | Rz-like spanin | lysis | 1 | 55986 | 56537 |
| YP_009125171.1 | NC_026594_p68 | FAD/FMN-containing dehydrogenase | phrog_778 | tail assembly protein | tail | 1 | 50930 | 51739 |
| YP_009125118.1 | NC_026594_p15 | hypothetical protein | phrog_6047 | unknown function | unknown function | 1 | 13573 | 14163 |
| YP_009125147.1 | NC_026594_p44 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 30516 | 30794 |
| YP_009125146.1 | NC_026594_p43 | hypothetical protein | phrog_6858 | unknown function | unknown function | 1 | 30260 | 30529 |
| YP_009125166.1 | NC_026594_p63 | hypothetical protein | phrog_4966 | unknown function | unknown function | 1 | 43970 | 44269 |
| YP_009125110.1 | NC_026594_p7 | Ribonucleotide reductase of class Ia | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 6393 | 8099 |
| YP_009125175.1 | NC_026594_p72 | hypothetical protein | phrog_5363 | unknown function | unknown function | 1 | 54346 | 54702 |
| YP_009125104.1 | NC_026594_p1 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 508 | 2082 |
| YP_009125108.1 | NC_026594_p5 | RecD-like DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 4100 | 5287 |
| YP_009125130.1 | NC_026594_p27 | hypothetical protein | phrog_22559 | unknown function | unknown function | 1 | 22630 | 23022 |
| YP_009125134.1 | NC_026594_p31 | hypothetical protein | phrog_27869 | unknown function | unknown function | 1 | 24315 | 24932 |
| YP_009125173.1 | NC_026594_p70 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 51982 | 52188 |
| YP_009125143.1 | NC_026594_p40 | exodeoxyribonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 28901 | 29590 |
| YP_009125176.1 | NC_026594_p73 | hypothetical protein | phrog_26629 | unknown function | unknown function | 1 | 54769 | 55245 |