Genomic map of Pseudomonas phage vB_PaeS_PAO1_Ab18 (NC_026594)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_026594
Definition
Pseudomonas phage vB_PaeS_PAO1_Ab18, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Abidjanvirus.
DB of origin
REFSEQ
Length
56537
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
63.49
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009125144.1 NC_026594_p41 hypothetical protein singleton unknown function unknown function 1 29587 29871
YP_009125139.1 NC_026594_p36 hypothetical protein phrog_10855 hydrolase other 1 27695 28246
YP_009125116.1 NC_026594_p13 hypothetical protein phrog_2396 unknown function unknown function 1 11625 12512
YP_009125129.1 NC_026594_p26 hypothetical protein phrog_7569 unknown function unknown function 1 22239 22619
YP_009125161.1 NC_026594_p58 hypothetical protein phrog_161 head closure Hc1 connector 1 41381 41770
YP_009125154.1 NC_026594_p51 hypothetical protein phrog_22916 unknown function unknown function 1 37573 37848
YP_009125106.1 NC_026594_p3 hypothetical protein phrog_2378 unknown function unknown function 1 2526 3077
YP_009125158.1 NC_026594_p55 hypothetical protein phrog_6213 unknown function unknown function 1 40166 40609
YP_009125150.1 NC_026594_p47 hypothetical protein phrog_145 portal protein head and packaging 1 33779 35275
YP_009125155.1 NC_026594_p52 hypothetical protein phrog_20571 unknown function unknown function 1 37901 38068
YP_009125162.1 NC_026594_p59 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 41772 42170
YP_009125133.1 NC_026594_p30 hypothetical protein phrog_3633 unknown function unknown function 1 23971 24264
YP_009125111.1 NC_026594_p8 hypothetical protein phrog_7790 unknown function unknown function 1 8349 8843
YP_009125170.1 NC_026594_p67 hypothetical protein phrog_1082 tail assembly protein tail 1 49266 50933
YP_009125117.1 NC_026594_p14 thymidylate synthase phrog_5131 thymidylate synthase DNA, RNA and nucleotide metabolism 1 12516 13562
YP_009125123.1 NC_026594_p20 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism 1 17682 18107
YP_009125122.1 NC_026594_p19 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 17153 17689
YP_009125160.1 NC_026594_p57 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 40849 41379
YP_009125137.1 NC_026594_p34 hypothetical protein phrog_6077 unknown function unknown function 1 26249 27340
YP_009125120.1 NC_026594_p17 hypothetical protein phrog_22852 unknown function unknown function 1 14662 15216
YP_009125136.1 NC_026594_p33 hypothetical protein phrog_8293 unknown function unknown function 1 26003 26221
YP_009125168.1 NC_026594_p65 hypothetical protein phrog_687 structural protein head and packaging 1 46723 48252
YP_009125107.1 NC_026594_p4 hypothetical protein phrog_2402 unknown function unknown function 1 3185 4024
YP_009125156.1 NC_026594_p53 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 38177 38965
YP_009125141.1 NC_026594_p38 hypothetical protein phrog_33726 unknown function unknown function 1 28488 28712
YP_009125138.1 NC_026594_p35 hypothetical protein phrog_31477 unknown function unknown function 1 27340 27702
YP_009125149.1 NC_026594_p46 terminase, large subunit phrog_2 terminase large subunit head and packaging 1 32233 33723
YP_009125174.1 NC_026594_p71 hypothetical protein phrog_1101 tail protein tail 1 52172 54346
YP_009125135.1 NC_026594_p32 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 25020 25925
YP_009125112.1 NC_026594_p9 hypothetical protein phrog_6364 unknown function unknown function 1 8896 9777
YP_009125172.1 NC_026594_p69 hypothetical protein phrog_1180 tail assembly chaperone tail 1 51752 51985
YP_009125167.1 NC_026594_p64 tail length tape-measure protein phrog_1538 tail length tape measure protein tail 1 44235 46712
YP_009125127.1 NC_026594_p24 hypothetical protein phrog_26943 unknown function unknown function 1 21064 21513
YP_009125119.1 NC_026594_p16 hypothetical protein phrog_5839 unknown function unknown function 1 14165 14605
YP_009125151.1 NC_026594_p48 minor head protein phrog_241 head morphogenesis head and packaging 1 35275 36522
YP_009125125.1 NC_026594_p22 integrase phrog_1829 DNA primase DNA, RNA and nucleotide metabolism 1 18393 20768
YP_009125131.1 NC_026594_p28 hypothetical protein phrog_8514 unknown function unknown function 1 23015 23590
YP_009125152.1 NC_026594_p49 ATPase phrog_170 PhoH-like phosphate starvation-inducible other 1 36568 37269
YP_009125109.1 NC_026594_p6 Ribonucleotide reductase of class Ia phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 5351 6412
YP_009125163.1 NC_026594_p60 hypothetical protein phrog_179 tail terminator connector 1 42167 42577
YP_009125105.1 NC_026594_p2 hypothetical protein phrog_5888 unknown function unknown function 1 2075 2437
YP_009125153.1 NC_026594_p50 hypothetical protein phrog_23157 unknown function unknown function 1 37285 37494
YP_009125114.1 NC_026594_p11 hypothetical protein phrog_1249 acetyltransferase other 1 10627 11052
YP_009125121.1 NC_026594_p18 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 15216 17156
YP_009125159.1 NC_026594_p56 hypothetical protein phrog_19293 virion structural protein head and packaging 1 40613 40843
YP_009125142.1 NC_026594_p39 hypothetical protein phrog_22459 unknown function unknown function 1 28684 28908
YP_009125124.1 NC_026594_p21 repressor phrog_3 transcriptional repressor transcription regulation 1 18065 18406
YP_009125169.1 NC_026594_p66 hypothetical protein phrog_687 structural protein head and packaging 1 48264 49265
YP_009125145.1 NC_026594_p42 hypothetical protein phrog_755 RNA ligase DNA, RNA and nucleotide metabolism 1 29868 30263
YP_009125148.1 NC_026594_p45 hypothetical protein phrog_4044 terminase small subunit head and packaging 1 31721 32236
YP_009125157.1 NC_026594_p54 major structural protein phrog_212 major head protein head and packaging 1 39106 40026
YP_009125178.1 NC_026594_p75 hypothetical protein phrog_1356 holin lysis 1 55799 56011
YP_009125128.1 NC_026594_p25 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 21563 22246
YP_009125165.1 NC_026594_p62 hypothetical protein phrog_313 Tail assembly chaperone tail 1 43527 43964
YP_009125126.1 NC_026594_p23 hypothetical protein phrog_27372 unknown function unknown function 1 20768 20974
YP_009125115.1 NC_026594_p12 hypothetical protein phrog_800 terminase small subunit head and packaging 1 11056 11625
YP_009125164.1 NC_026594_p61 hypothetical protein phrog_290 minor tail protein tail 1 42589 43527
YP_009125140.1 NC_026594_p37 hypothetical protein phrog_3958 unknown function unknown function 1 28243 28500
YP_009125177.1 NC_026594_p74 baseplate hub subunit and tail lysozyme phrog_1259 baseplate hub subunit and tail lysozyme tail 1 55242 55748
YP_009125132.1 NC_026594_p29 hypothetical protein phrog_22281 unknown function unknown function 1 23625 23870
YP_009125113.1 NC_026594_p10 hypothetical protein phrog_16743 unknown function unknown function 1 9770 10630
YP_009125179.1 NC_026594_p76 hypothetical protein phrog_2466 Rz-like spanin lysis 1 55986 56537
YP_009125171.1 NC_026594_p68 FAD/FMN-containing dehydrogenase phrog_778 tail assembly protein tail 1 50930 51739
YP_009125118.1 NC_026594_p15 hypothetical protein phrog_6047 unknown function unknown function 1 13573 14163
YP_009125147.1 NC_026594_p44 hypothetical protein phrog_464 unknown function unknown function 1 30516 30794
YP_009125146.1 NC_026594_p43 hypothetical protein phrog_6858 unknown function unknown function 1 30260 30529
YP_009125166.1 NC_026594_p63 hypothetical protein phrog_4966 unknown function unknown function 1 43970 44269
YP_009125110.1 NC_026594_p7 Ribonucleotide reductase of class Ia phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 6393 8099
YP_009125175.1 NC_026594_p72 hypothetical protein phrog_5363 unknown function unknown function 1 54346 54702
YP_009125104.1 NC_026594_p1 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 508 2082
YP_009125108.1 NC_026594_p5 RecD-like DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 4100 5287
YP_009125130.1 NC_026594_p27 hypothetical protein phrog_22559 unknown function unknown function 1 22630 23022
YP_009125134.1 NC_026594_p31 hypothetical protein phrog_27869 unknown function unknown function 1 24315 24932
YP_009125173.1 NC_026594_p70 hypothetical protein phrog_1196 tail assembly chaperone tail 1 51982 52188
YP_009125143.1 NC_026594_p40 exodeoxyribonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 28901 29590
YP_009125176.1 NC_026594_p73 hypothetical protein phrog_26629 unknown function unknown function 1 54769 55245