| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026595 |
Definition |
Mycobacterium phage Hades, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
54986 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
102 |
%GC |
61.39 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125215.1 | NC_026595_p36 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29712 | 30533 |
| YP_009125248.1 | NC_026595_p69 | DNA methylase | phrog_363 | DNA methyltransferase | other | 1 | 43298 | 44011 |
| YP_009125255.1 | NC_026595_p76 | hypothetical protein | phrog_9299 | unknown function | unknown function | 1 | 46004 | 46090 |
| YP_009125224.1 | NC_026595_p45 | immunity repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 33881 | 34414 |
| YP_009125194.1 | NC_026595_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13021 | 14730 |
| YP_009125189.1 | NC_026595_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7098 | 7502 |
| YP_009125260.1 | NC_026595_p81 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 47173 | 47484 |
| YP_009125181.1 | NC_026595_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| YP_009125199.1 | NC_026595_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21844 | 23046 |
| YP_009125227.1 | NC_026595_p48 | hypothetical protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 35812 | 36621 |
| YP_009125213.1 | NC_026595_p34 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29093 | 29467 |
| YP_009125209.1 | NC_026595_p30 | hypothetical protein | phrog_5492 | unknown function | unknown function | 1 | 26409 | 26582 |
| YP_009125240.1 | NC_026595_p61 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41111 | 41476 |
| YP_009125258.1 | NC_026595_p79 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 46591 | 46899 |
| YP_009125208.1 | NC_026595_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26167 | 26412 |
| YP_009125203.1 | NC_026595_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24354 | 25178 |
| YP_009125249.1 | NC_026595_p70 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44008 | 44169 |
| YP_009125180.1 | NC_026595_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_009125182.1 | NC_026595_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3613 |
| YP_009125222.1 | NC_026595_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 31946 | 33073 |
| YP_009125242.1 | NC_026595_p63 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41631 | 41861 |
| YP_009125251.1 | NC_026595_p72 | hypothetical protein | phrog_6193 | unknown function | unknown function | 1 | 44326 | 44448 |
| YP_009125247.1 | NC_026595_p68 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 43152 | 43301 |
| YP_009125183.1 | NC_026595_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3600 | 4355 |
| YP_009125280.1 | NC_026595_p101 | glucosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53895 | 54518 |
| YP_009125228.1 | NC_026595_p49 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36618 | 36833 |
| YP_009125184.1 | NC_026595_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4381 | 5031 |
| YP_009125206.1 | NC_026595_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25821 | 25967 |
| YP_009125217.1 | NC_026595_p38 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30608 | 30841 |
| YP_009125241.1 | NC_026595_p62 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 41476 | 41631 |
| YP_009125200.1 | NC_026595_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23070 | 23411 |
| YP_009125204.1 | NC_026595_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25184 | 25363 |
| YP_009125212.1 | NC_026595_p33 | holin | phrog_443 | holin | lysis | 1 | 28863 | 29096 |
| YP_009125231.1 | NC_026595_p52 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 37185 | 37334 |
| YP_009125267.1 | NC_026595_p88 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 48876 | 49172 |
| YP_009125264.1 | NC_026595_p85 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 48319 | 48510 |
| YP_009125214.1 | NC_026595_p35 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29492 | 29725 |
| YP_009125239.1 | NC_026595_p60 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40833 | 41114 |
| YP_009125246.1 | NC_026595_p67 | hypothetical protein | phrog_6573 | unknown function | unknown function | 1 | 43051 | 43155 |
| YP_009125253.1 | NC_026595_p74 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44660 | 45565 |
| YP_009125229.1 | NC_026595_p50 | hypothetical protein | phrog_5563 | unknown function | unknown function | 1 | 36830 | 36928 |
| YP_009125210.1 | NC_026595_p31 | lysin A | phrog_700 | endolysin | lysis | 1 | 26579 | 27853 |
| YP_009125223.1 | NC_026595_p44 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33172 | 33618 |
| YP_009125277.1 | NC_026595_p98 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 51775 | 53214 |
| YP_009125201.1 | NC_026595_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23450 | 23704 |
| YP_009125207.1 | NC_026595_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25964 | 26116 |
| YP_009125226.1 | NC_026595_p47 | hypothetical protein | phrog_15279 | unknown function | unknown function | 1 | 34892 | 35815 |
| YP_009125270.1 | NC_026595_p91 | MerR-like protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 50166 | 50390 |
| YP_009125269.1 | NC_026595_p90 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 49413 | 50057 |
| YP_009125274.1 | NC_026595_p95 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 50900 | 51301 |
| YP_009125232.1 | NC_026595_p53 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 37331 | 37507 |
| YP_009125205.1 | NC_026595_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25530 | 25814 |
| YP_009125268.1 | NC_026595_p89 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 49165 | 49416 |
| YP_009125202.1 | NC_026595_p23 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23719 | 24357 |
| YP_009125243.1 | NC_026595_p64 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 41858 | 42103 |
| YP_009125263.1 | NC_026595_p84 | hypothetical protein | phrog_6727 | unknown function | unknown function | 1 | 48137 | 48322 |
| YP_009125281.1 | NC_026595_p102 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54518 | 54844 |
| YP_009125219.1 | NC_026595_p40 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31099 | 31272 |
| YP_009125187.1 | NC_026595_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6446 | 6775 |
| YP_009125276.1 | NC_026595_p97 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 51586 | 51747 |
| YP_009125186.1 | NC_026595_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5883 | 6449 |
| YP_009125198.1 | NC_026595_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19955 | 21844 |
| YP_009125257.1 | NC_026595_p78 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46407 | 46607 |
| YP_009125221.1 | NC_026595_p42 | DNA binding domain protein | singleton | unknown function | unknown function | 1 | 31737 | 31946 |
| YP_009125252.1 | NC_026595_p73 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 44445 | 44663 |
| YP_009125196.1 | NC_026595_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16561 | 17409 |
| YP_009125193.1 | NC_026595_p14 | tapemeasure | phrog_1942 | tail length tape measure protein | tail | 1 | 9493 | 13020 |
| YP_009125265.1 | NC_026595_p86 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 48507 | 48686 |
| YP_009125197.1 | NC_026595_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17406 | 19958 |
| YP_009125271.1 | NC_026595_p92 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 50387 | 50551 |
| YP_009125211.1 | NC_026595_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27853 | 28854 |
| YP_009125266.1 | NC_026595_p87 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 48668 | 48823 |
| YP_009125190.1 | NC_026595_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7611 | 8420 |
| YP_009125236.1 | NC_026595_p57 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39513 | 39860 |
| YP_009125218.1 | NC_026595_p39 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30834 | 30926 |
| YP_009125192.1 | NC_026595_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8539 | 9090 |
| YP_009125272.1 | NC_026595_p93 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 50557 | 50715 |
| YP_009125216.1 | NC_026595_p37 | hypothetical protein | phrog_8186 | unknown function | unknown function | 1 | 30537 | 30623 |
| YP_009125245.1 | NC_026595_p66 | HNH homing endonuclease domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42692 | 43054 |
| YP_009125273.1 | NC_026595_p94 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 50712 | 50903 |
| YP_009125195.1 | NC_026595_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14815 | 16524 |
| YP_009125261.1 | NC_026595_p82 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 47481 | 47696 |
| YP_009125191.1 | NC_026595_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8539 | 9475 |
| YP_009125275.1 | NC_026595_p96 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 51298 | 51564 |
| YP_009125238.1 | NC_026595_p59 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 40342 | 40836 |
| YP_009125237.1 | NC_026595_p58 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 39857 | 40354 |
| YP_009125256.1 | NC_026595_p77 | hypothetical protein | phrog_21566 | unknown function | unknown function | 1 | 46144 | 46410 |
| YP_009125220.1 | NC_026595_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31310 | 31423 |
| YP_009125188.1 | NC_026595_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6782 | 7108 |
| YP_009125185.1 | NC_026595_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5050 | 5871 |
| YP_009125235.1 | NC_026595_p56 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 39235 | 39516 |
| YP_009125259.1 | NC_026595_p80 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 46896 | 47180 |
| YP_009125230.1 | NC_026595_p51 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 36925 | 37188 |
| YP_009125244.1 | NC_026595_p65 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 42117 | 42695 |
| YP_009125234.1 | NC_026595_p55 | hypothetical protein | phrog_3416 | unknown function | unknown function | 1 | 38378 | 39154 |
| YP_009125250.1 | NC_026595_p71 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44162 | 44326 |
| YP_009125279.1 | NC_026595_p100 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 53653 | 53898 |
| YP_009125262.1 | NC_026595_p83 | MPME2 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 47779 | 48150 |
| YP_009125254.1 | NC_026595_p75 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 45562 | 45924 |
| YP_009125233.1 | NC_026595_p54 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37504 | 38343 |
| YP_009125225.1 | NC_026595_p46 | CRO protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 34544 | 34873 |
| YP_009125278.1 | NC_026595_p99 | Ser/Thr kinase | phrog_3297 | kinase | other | 1 | 53219 | 53689 |