| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_026597 |
Definition |
Mycobacterium phage Sparky, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
63334 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
65.16 |
Number of singletons |
23 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009125447.1 | NC_026597_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49042 | 49185 |
| YP_009125421.1 | NC_026597_p38 | hypothetical protein | phrog_17260 | unknown function | unknown function | 1 | 32792 | 33271 |
| YP_009125442.1 | NC_026597_p59 | hypothetical protein | phrog_2233 | unknown function | unknown function | 1 | 43334 | 44023 |
| YP_009125426.1 | NC_026597_p43 | immunity repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 36077 | 36436 |
| YP_009125395.1 | NC_026597_p12 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 8711 | 9741 |
| YP_009125397.1 | NC_026597_p14 | tapemeasure | phrog_3547 | tail length tape measure protein | tail | 1 | 9734 | 15127 |
| YP_009125472.1 | NC_026597_p89 | hypothetical protein | phrog_6439 | unknown function | unknown function | 1 | 62558 | 62809 |
| YP_009125467.1 | NC_026597_p84 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 59585 | 61039 |
| YP_009125434.1 | NC_026597_p51 | hypothetical protein | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 38977 | 39525 |
| YP_009125453.1 | NC_026597_p70 | hypothetical protein | phrog_37856 | unknown function | unknown function | 1 | 51976 | 52257 |
| YP_009125402.1 | NC_026597_p19 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19298 | 21607 |
| YP_009125390.1 | NC_026597_p7 | head-to-tail connector | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6404 | 6811 |
| YP_009125431.1 | NC_026597_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37765 | 37929 |
| YP_009125458.1 | NC_026597_p75 | hypothetical protein | phrog_18518 | unknown function | unknown function | 1 | 54003 | 54419 |
| YP_009125403.1 | NC_026597_p20 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 21631 | 21885 |
| YP_009125387.1 | NC_026597_p4 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3760 | 4665 |
| YP_009125406.1 | NC_026597_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23532 | 23894 |
| YP_009125419.1 | NC_026597_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31636 | 32061 |
| YP_009125463.1 | NC_026597_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56654 | 56938 |
| YP_009125422.1 | NC_026597_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33268 | 33654 |
| YP_009125398.1 | NC_026597_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15127 | 16143 |
| YP_009125443.1 | NC_026597_p60 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 44023 | 45552 |
| YP_009125450.1 | NC_026597_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50496 | 50642 |
| YP_009125423.1 | NC_026597_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33642 | 33827 |
| YP_009125428.1 | NC_026597_p45 | HTH DNA binding protein | singleton | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36803 | 37099 |
| YP_009125446.1 | NC_026597_p63 | hypothetical protein | phrog_18910 | unknown function | unknown function | 1 | 48324 | 49049 |
| YP_009125414.1 | NC_026597_p31 | hypothetical protein | phrog_26515 | unknown function | unknown function | 1 | 29110 | 29247 |
| YP_009125464.1 | NC_026597_p81 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56935 | 58305 |
| YP_009125420.1 | NC_026597_p37 | hypothetical protein | phrog_13413 | unknown function | unknown function | 1 | 32307 | 32792 |
| YP_009125391.1 | NC_026597_p8 | head-to-tail connector | phrog_18813 | head-tail connector protein | connector | 1 | 6802 | 7125 |
| YP_009125457.1 | NC_026597_p74 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 53650 | 54003 |
| YP_009125417.1 | NC_026597_p34 | hypothetical protein | phrog_6131 | unknown function | unknown function | -1 | 31101 | 31421 |
| YP_009125405.1 | NC_026597_p22 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 22955 | 23482 |
| YP_009125430.1 | NC_026597_p47 | hypothetical protein | phrog_3892 | unknown function | unknown function | 1 | 37379 | 37768 |
| YP_009125432.1 | NC_026597_p49 | hypothetical protein | phrog_9420 | unknown function | unknown function | 1 | 38062 | 38466 |
| YP_009125385.1 | NC_026597_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 507 | 2288 |
| YP_009125392.1 | NC_026597_p9 | head-to-tail connector | phrog_5775 | head-tail connector protein | connector | 1 | 7128 | 7496 |
| YP_009125388.1 | NC_026597_p5 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 4760 | 5305 |
| YP_009125433.1 | NC_026597_p50 | hypothetical protein | phrog_13625 | unknown function | unknown function | 1 | 38463 | 38807 |
| YP_009125461.1 | NC_026597_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55861 | 56451 |
| YP_009125400.1 | NC_026597_p17 | minor tail protein | phrog_3856 | minor tail protein | tail | 1 | 17888 | 18823 |
| YP_009125466.1 | NC_026597_p83 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 59084 | 59497 |
| YP_009125425.1 | NC_026597_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35208 | 35489 |
| YP_009125401.1 | NC_026597_p18 | minor tail protein | singleton | unknown function | unknown function | 1 | 18825 | 19301 |
| YP_009125471.1 | NC_026597_p88 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 62308 | 62565 |
| YP_009125408.1 | NC_026597_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24088 | 24258 |
| YP_009125451.1 | NC_026597_p68 | hypothetical protein | phrog_36479 | unknown function | unknown function | 1 | 50632 | 50958 |
| YP_009125460.1 | NC_026597_p77 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 54961 | 55860 |
| YP_009125439.1 | NC_026597_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42458 | 42865 |
| YP_009125418.1 | NC_026597_p35 | hypothetical protein | phrog_8324 | unknown function | unknown function | -1 | 31421 | 31639 |
| YP_009125468.1 | NC_026597_p85 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 61036 | 61737 |
| YP_009125440.1 | NC_026597_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42862 | 43098 |
| YP_009125456.1 | NC_026597_p73 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 53247 | 53657 |
| YP_009125454.1 | NC_026597_p71 | WhiB | phrog_12112 | transcriptional regulator WhiB-like | transcription regulation | 1 | 52254 | 52622 |
| YP_009125462.1 | NC_026597_p79 | hypothetical protein | phrog_8005 | unknown function | unknown function | 1 | 56451 | 56657 |
| YP_009125386.1 | NC_026597_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2308 | 3759 |
| YP_009125449.1 | NC_026597_p66 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 49626 | 50477 |
| YP_009125473.1 | NC_026597_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62809 | 62949 |
| YP_009125465.1 | NC_026597_p82 | hypothetical protein | phrog_6565 | unknown function | unknown function | 1 | 58302 | 59087 |
| YP_009125438.1 | NC_026597_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42177 | 42458 |
| YP_009125393.1 | NC_026597_p10 | head-to-tail connector | phrog_123 | tail terminator | connector | 1 | 7493 | 8023 |
| YP_009125452.1 | NC_026597_p69 | hypothetical protein | phrog_2045 | unknown function | unknown function | 1 | 50951 | 51979 |
| YP_009125436.1 | NC_026597_p53 | RecT | phrog_3657 | unknown function | unknown function | 1 | 40520 | 41929 |
| YP_009125474.1 | NC_026597_p91 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62955 | 63257 |
| YP_009125415.1 | NC_026597_p32 | Ro protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 29259 | 30878 |
| YP_009125455.1 | NC_026597_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52604 | 53254 |
| YP_009125404.1 | NC_026597_p21 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21885 | 22931 |
| YP_009125448.1 | NC_026597_p65 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 49221 | 49586 |
| YP_009125409.1 | NC_026597_p26 | lysin A | phrog_1512 | endolysin | lysis | 1 | 24326 | 25279 |
| YP_009125412.1 | NC_026597_p29 | hypothetical protein | phrog_1298 | minor tail protein | tail | 1 | 27110 | 27520 |
| YP_009125469.1 | NC_026597_p86 | antitoxin | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | -1 | 61734 | 61982 |
| YP_009125416.1 | NC_026597_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30889 | 31098 |
| YP_009125411.1 | NC_026597_p28 | hypothetical protein | phrog_565 | holin | lysis | 1 | 26721 | 27113 |
| YP_009125410.1 | NC_026597_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 25276 | 26496 |
| YP_009125437.1 | NC_026597_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41929 | 42177 |
| YP_009125413.1 | NC_026597_p30 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 27513 | 28001 |
| YP_009125394.1 | NC_026597_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 8045 | 8707 |
| YP_009125445.1 | NC_026597_p62 | DNA helicase/methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 45788 | 48307 |
| YP_009125389.1 | NC_026597_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5365 | 6333 |
| YP_009125399.1 | NC_026597_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16144 | 17859 |
| YP_009125435.1 | NC_026597_p52 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 39597 | 40523 |
| YP_009125384.1 | NC_026597_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 98 | 529 |
| YP_009125429.1 | NC_026597_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37093 | 37305 |
| YP_009125407.1 | NC_026597_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23891 | 24097 |
| YP_009125427.1 | NC_026597_p44 | CRO protein | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 36514 | 36780 |
| YP_009125444.1 | NC_026597_p61 | hypothetical protein | phrog_21063 | unknown function | unknown function | 1 | 45549 | 45791 |
| YP_009125459.1 | NC_026597_p76 | DnaQ-like exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 54416 | 54964 |
| YP_009125441.1 | NC_026597_p58 | hypothetical protein | phrog_10863 | unknown function | unknown function | 1 | 43128 | 43337 |
| YP_009125470.1 | NC_026597_p87 | toxin | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | -1 | 61979 | 62242 |
| YP_009125424.1 | NC_026597_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 33811 | 34989 |
| YP_009125396.1 | NC_026597_p13 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 8711 | 9361 |